RNA–Protein interactions for RNA: YMR309C

NIP1, Transcript of eIF3c subunit of the eukaryotic translation initiation factor 3 (eIF3), yeastyeast

Gene NIP1, Length 2,439 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP1YMR309C ECM14P38836 430 aa0.33□□□□□ -2.36
NIP1YMR309C NAB3P38996 802 aaKnown RBP RIP-Chip data0.33□□□□□ -2.36not detected
NIP1YMR309C LSM5P40089 93 aaKnown RBP0.33□□□□□ -2.36
NIP1YMR309C YIL054WP40524 105 aa0.33□□□□□ -2.36
NIP1YMR309C YNL320WP42840 284 aa0.33□□□□□ -2.36
NIP1YMR309C SRB7P47822 140 aa0.33□□□□□ -2.36
NIP1YMR309C TCB2P48231 1178 aa0.33□□□□□ -2.36
NIP1YMR309C NAS6P50086 228 aa0.33□□□□□ -2.36
NIP1YMR309C SHE4P51534 789 aa0.33□□□□□ -2.36
NIP1YMR309C YGL088WP53151 121 aa0.33□□□□□ -2.36
NIP1YMR309C CAX4P53223 239 aa0.33□□□□□ -2.36
NIP1YMR309C SUB1P54000 292 aaKnown RBP0.33□□□□□ -2.36
NIP1YMR309C YPL080CQ02826 108 aa0.33□□□□□ -2.36
NIP1YMR309C YPL113CQ02961 396 aa0.33□□□□□ -2.36
NIP1YMR309C INP1Q03694 420 aa0.33□□□□□ -2.36
NIP1YMR309C GMC1Q04399 608 aa0.33□□□□□ -2.36
NIP1YMR309C YLH47Q06493 454 aa0.33□□□□□ -2.36
NIP1YMR309C RLP24Q07915 199 aaKnown RBP0.33□□□□□ -2.36
NIP1YMR309C UBA3Q99344 299 aa0.33□□□□□ -2.36
NIP1YMR309C MET2P08465 486 aa0.32□□□□□ -2.36
NIP1YMR309C HPR1P17629 752 aaKnown RBP0.32□□□□□ -2.36
NIP1YMR309C SNF6P18888 332 aa0.32□□□□□ -2.36
NIP1YMR309C RRP7P25368 297 aaPredicted RBP0.32□□□□□ -2.36
NIP1YMR309C MIG1P27705 504 aa0.32□□□□□ -2.36
NIP1YMR309C PMT2P31382 759 aa0.32□□□□□ -2.36
NIP1YMR309C YPS1P32329 569 aa0.32□□□□□ -2.36
NIP1YMR309C ALK2P32789 676 aaPredicted RBP0.32□□□□□ -2.36
NIP1YMR309C LTV1P34078 463 aa0.32□□□□□ -2.36
NIP1YMR309C YBL081WP38180 368 aaKnown RBP0.32□□□□□ -2.36
NIP1YMR309C TAE1P38340 232 aa0.32□□□□□ -2.36
NIP1YMR309C EFM1P38732 585 aa0.32□□□□□ -2.36
NIP1YMR309C RBG1P39729 369 aa0.32□□□□□ -2.36
NIP1YMR309C SNL1P40548 159 aa0.32□□□□□ -2.36
NIP1YMR309C ECO1P43605 281 aa0.32□□□□□ -2.36
NIP1YMR309C MEH1Q02205 184 aa0.32□□□□□ -2.36
NIP1YMR309C SMD1Q02260 146 aaPredicted RBP0.32□□□□□ -2.36
NIP1YMR309C RRB1Q04225 511 aaKnown RBP0.32□□□□□ -2.36
NIP1YMR309C CSI1Q04368 295 aa0.32□□□□□ -2.36
NIP1YMR309C YOL075CQ08234 1294 aa0.32□□□□□ -2.36
NIP1YMR309C YPR063CQ12160 140 aa0.32□□□□□ -2.36
NIP1YMR309C MHP1P43638 1398 aa0.32□□□□□ -2.36
NIP1YMR309C VPS63O13549 108 aa0.32□□□□□ -2.36
NIP1YMR309C TOA2P32774 122 aa0.32□□□□□ -2.36
NIP1YMR309C TIP20P33891 701 aa0.32□□□□□ -2.36
NIP1YMR309C SDH4P37298 181 aa0.32□□□□□ -2.36
NIP1YMR309C LYS12P40495 371 aaKnown RBP0.32□□□□□ -2.36
NIP1YMR309C YGL118CP53132 145 aa0.32□□□□□ -2.36
NIP1YMR309C PEX27Q08580 376 aa0.32□□□□□ -2.36
NIP1YMR309C UAF30Q08747 228 aa0.32□□□□□ -2.36
NIP1YMR309C FRE8Q12209 686 aa0.32□□□□□ -2.36
NIP1YMR309C GLE1Q12315 538 aa0.32□□□□□ -2.36
NIP1YMR309C GPM3Q12326 303 aa0.32□□□□□ -2.36
NIP1YMR309C IES3Q12345 250 aa0.32□□□□□ -2.36
NIP1YMR309C PRP46Q12417 451 aaPredicted RBP0.32□□□□□ -2.36
NIP1YMR309C SRN2Q99176 213 aa0.32□□□□□ -2.36
NIP1YMR309C SAG1P20840 650 aa0.31□□□□□ -2.36
NIP1YMR309C MRPL20P22354 195 aaPredicted RBP0.31□□□□□ -2.36
NIP1YMR309C RPC53P25441 422 aa0.31□□□□□ -2.36
NIP1YMR309C EFB1P32471 206 aaKnown RBP0.31□□□□□ -2.36
NIP1YMR309C MKK1P32490 508 aa0.31□□□□□ -2.36
NIP1YMR309C ZRT3P34240 503 aa0.31□□□□□ -2.36
NIP1YMR309C RCK1P38622 512 aa0.31□□□□□ -2.36
NIP1YMR309C LCB2P40970 561 aa0.31□□□□□ -2.36
NIP1YMR309C MIC19P43594 170 aa0.31□□□□□ -2.36
NIP1YMR309C YFR018CP43599 363 aa0.31□□□□□ -2.36
NIP1YMR309C YJL055WP47044 245 aa0.31□□□□□ -2.36
NIP1YMR309C FMP48P53233 369 aa0.31□□□□□ -2.36
NIP1YMR309C TRM82Q03774 444 aa0.31□□□□□ -2.36
NIP1YMR309C YMR244WQ04018 355 aa0.31□□□□□ -2.36
NIP1YMR309C IPK1Q06667 281 aa0.31□□□□□ -2.36
NIP1YMR309C CLP1Q08685 445 aaPredicted RBP0.31□□□□□ -2.36
NIP1YMR309C MRX4Q12467 430 aa0.31□□□□□ -2.36
NIP1YMR309C DET1Q99288 334 aaKnown RBP0.31□□□□□ -2.36
NIP1YMR309C CTA1P15202 515 aa0.3□□□□□ -2.36
NIP1YMR309C INO2P26798 304 aa0.3□□□□□ -2.36
NIP1YMR309C RFT1P38206 574 aaPredicted RBP0.3□□□□□ -2.36
NIP1YMR309C SRP72P38688 640 aaKnown RBP0.3□□□□□ -2.36
NIP1YMR309C SMF2P38778 549 aa0.3□□□□□ -2.36
NIP1YMR309C YHR177WP38867 453 aa0.3□□□□□ -2.36
NIP1YMR309C EPL1P43572 832 aa0.3□□□□□ -2.36
NIP1YMR309C MPS2P53159 387 aa0.3□□□□□ -2.36
NIP1YMR309C CIK1Q01649 594 aa0.3□□□□□ -2.36
NIP1YMR309C SXM1Q04175 944 aaKnown RBP0.3□□□□□ -2.36
NIP1YMR309C SMC6Q12749 1114 aa0.3□□□□□ -2.36
NIP1YMR309C KRE1P17260 313 aa0.3□□□□□ -2.36
NIP1YMR309C DAL81P21657 970 aa0.3□□□□□ -2.36
NIP1YMR309C MSK1P32048 576 aa0.3□□□□□ -2.36
NIP1YMR309C MED8P38304 223 aa0.3□□□□□ -2.36
NIP1YMR309C MED6P38782 295 aa0.3□□□□□ -2.36
NIP1YMR309C YER188WP40103 239 aa0.3□□□□□ -2.36
NIP1YMR309C EFM3P47163 339 aa0.3□□□□□ -2.36
NIP1YMR309C HSH155P49955 971 aaKnown RBP0.3□□□□□ -2.36
NIP1YMR309C HCH1P53834 153 aa0.3□□□□□ -2.36
NIP1YMR309C SUR7P54003 302 aa0.3□□□□□ -2.36
NIP1YMR309C SMP3Q04174 516 aa0.3□□□□□ -2.36
NIP1YMR309C AIM33Q04516 312 aa0.3□□□□□ -2.36
NIP1YMR309C NDL1Q06568 189 aa0.3□□□□□ -2.36
NIP1YMR309C ALE1Q08548 619 aa0.3□□□□□ -2.36
NIP1YMR309C YDR018CQ12185 396 aa0.3□□□□□ -2.36
NIP1YMR309C DFM1Q12743 341 aaKnown RBP0.3□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms