RNA–Protein interactions for RNA: YMR214W

SCJ1, Transcript of One of several homologs of bacterial chaperone DnaJ, yeast

Gene SCJ1, Length 1,134 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCJ1	YMR214W	RRP7	P25368	297 aa	Predicted RBP	13.75	□□□□□ -0.21
SCJ1	YMR214W	CTF8	P38877	133 aa		13.75	□□□□□ -0.21
SCJ1	YMR214W	SOK1	P40317	901 aa		13.75	□□□□□ -0.21
SCJ1	YMR214W	SMK1	P41808	388 aa		13.75	□□□□□ -0.21
SCJ1	YMR214W	SHR5	P41912	237 aa		13.75	□□□□□ -0.21
SCJ1	YMR214W	MNN5	P46982	586 aa		13.75	□□□□□ -0.21
SCJ1	YMR214W	HMS2	P47175	358 aa		13.75	□□□□□ -0.21
SCJ1	YMR214W	COG5	P53951	403 aa		13.75	□□□□□ -0.21
SCJ1	YMR214W	RSN1	Q03516	953 aa		13.75	□□□□□ -0.21
SCJ1	YMR214W	TPK3	P05986	398 aa		13.74	□□□□□ -0.21
SCJ1	YMR214W	HBS1	P32769	611 aa	Known RBP	13.74	□□□□□ -0.21
SCJ1	YMR214W	SRO77	P38163	1010 aa		13.74	□□□□□ -0.21
SCJ1	YMR214W	RPE1	P46969	238 aa		13.74	□□□□□ -0.21
SCJ1	YMR214W	YGR168C	P53293	376 aa		13.74	□□□□□ -0.21
SCJ1	YMR214W	CRR1	Q05790	422 aa		13.74	□□□□□ -0.21
SCJ1	YMR214W	AIR2	Q12476	344 aa	Known RBP	13.74	□□□□□ -0.21
SCJ1	YMR214W	PSF1	Q12488	208 aa		13.74	□□□□□ -0.21
SCJ1	YMR214W	SFG1	Q12507	346 aa		13.74	□□□□□ -0.21
SCJ1	YMR214W	GAS1	P22146	559 aa	Known RBP	13.73	□□□□□ -0.21
SCJ1	YMR214W	ITR2	P30606	609 aa		13.73	□□□□□ -0.21
SCJ1	YMR214W	YME2	P32843	850 aa		13.73	□□□□□ -0.21
SCJ1	YMR214W	APD1	P38281	316 aa		13.73	□□□□□ -0.21
SCJ1	YMR214W	DBP6	P53734	629 aa	Known RBP	13.73	□□□□□ -0.21
SCJ1	YMR214W	GRX5	Q02784	150 aa		13.73	□□□□□ -0.21
SCJ1	YMR214W	FLO9	P39712	1322 aa		13.72	□□□□□ -0.21
SCJ1	YMR214W	CWH43	P25618	953 aa		13.72	□□□□□ -0.21
SCJ1	YMR214W	RPC82	P32349	654 aa		13.72	□□□□□ -0.21
SCJ1	YMR214W	EMP70	P32802	667 aa		13.72	□□□□□ -0.21
SCJ1	YMR214W	ARC19	P33204	171 aa	Known RBP	13.72	□□□□□ -0.21
SCJ1	YMR214W	RSM22	P36056	628 aa		13.72	□□□□□ -0.21
SCJ1	YMR214W	YBR138C	P38277	524 aa		13.72	□□□□□ -0.21
SCJ1	YMR214W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	13.72	□□□□□ -0.21	not detected
SCJ1	YMR214W	YEL068C	P39977	110 aa		13.72	□□□□□ -0.21
SCJ1	YMR214W	RRG9	P40156	214 aa		13.72	□□□□□ -0.21
SCJ1	YMR214W	YOR214C	Q12282	236 aa		13.72	□□□□□ -0.21
SCJ1	YMR214W	SPS100	P13130	326 aa		13.71	□□□□□ -0.21
SCJ1	YMR214W	BUD5	P25300	642 aa	Predicted RBP	13.71	□□□□□ -0.21
SCJ1	YMR214W	PRP19	P32523	503 aa	Known RBP	13.71	□□□□□ -0.21
SCJ1	YMR214W	SEC61	P32915	480 aa		13.71	□□□□□ -0.21
SCJ1	YMR214W	SOP4	P39543	234 aa	Predicted RBP	13.71	□□□□□ -0.21
SCJ1	YMR214W	YIL169C	P40442	995 aa		13.71	□□□□□ -0.21
SCJ1	YMR214W	YIL067C	P40514	678 aa		13.71	□□□□□ -0.21
SCJ1	YMR214W	TLG1	Q03322	224 aa		13.71	□□□□□ -0.21
SCJ1	YMR214W	CRT10	Q08226	957 aa		13.71	□□□□□ -0.21
SCJ1	YMR214W	NPC2	Q12408	173 aa		13.71	□□□□□ -0.21
SCJ1	YMR214W	CNA1	P23287	553 aa		13.7	□□□□□ -0.22
SCJ1	YMR214W	PRP21	P32524	280 aa	Predicted RBP	13.7	□□□□□ -0.22
SCJ1	YMR214W	MAL32	P38158	584 aa		13.7	□□□□□ -0.22
SCJ1	YMR214W	EXO84	P38261	753 aa		13.7	□□□□□ -0.22
SCJ1	YMR214W	MSS2	P40990	351 aa		13.7	□□□□□ -0.22
SCJ1	YMR214W	GCN20	P43535	752 aa	Known RBP	13.7	□□□□□ -0.22
SCJ1	YMR214W	NCE101	Q02820	53 aa		13.7	□□□□□ -0.22
SCJ1	YMR214W	YLR345W	Q06137	509 aa		13.7	□□□□□ -0.22
SCJ1	YMR214W	PST2	Q12335	198 aa	Known RBP	13.7	□□□□□ -0.22
SCJ1	YMR214W	CAR2	P07991	424 aa	Known RBP	13.69	□□□□□ -0.22
SCJ1	YMR214W	SAM35	P14693	329 aa		13.69	□□□□□ -0.22
SCJ1	YMR214W	KGD1	P20967	1014 aa	Known RBP	13.69	□□□□□ -0.22
SCJ1	YMR214W	PBN1	P25580	416 aa		13.69	□□□□□ -0.22
SCJ1	YMR214W	YCR100C	P25606	316 aa		13.69	□□□□□ -0.22
SCJ1	YMR214W	ATS1	P31386	333 aa		13.69	□□□□□ -0.22
SCJ1	YMR214W	ASF2	P32448	525 aa	Predicted RBP	13.69	□□□□□ -0.22
SCJ1	YMR214W	HIR2	P32480	875 aa		13.69	□□□□□ -0.22
SCJ1	YMR214W	SNU114	P36048	1008 aa	Known RBP	13.69	□□□□□ -0.22
SCJ1	YMR214W	ALP1	P38971	573 aa		13.69	□□□□□ -0.22
SCJ1	YMR214W	ISC1	P40015	477 aa	Known RBP	13.69	□□□□□ -0.22
SCJ1	YMR214W	AVT6	P40074	448 aa		13.69	□□□□□ -0.22
SCJ1	YMR214W	QRI7	P43122	407 aa		13.69	□□□□□ -0.22
SCJ1	YMR214W	BAT2	P47176	376 aa	Known RBP	13.69	□□□□□ -0.22
SCJ1	YMR214W	SLD3	P53135	668 aa		13.69	□□□□□ -0.22
SCJ1	YMR214W	MOT3	P54785	490 aa	Known RBP	13.69	□□□□□ -0.22
SCJ1	YMR214W	YKR011C	Q02209	353 aa		13.69	□□□□□ -0.22
SCJ1	YMR214W	ABZ2	Q03266	374 aa		13.69	□□□□□ -0.22
SCJ1	YMR214W	YMD8	Q03697	442 aa		13.69	□□□□□ -0.22
SCJ1	YMR214W	SEI1	Q06058	285 aa		13.69	□□□□□ -0.22
SCJ1	YMR214W	YPR015C	Q12531	247 aa		13.69	□□□□□ -0.22
SCJ1	YMR214W	TAD3	Q9URQ3	322 aa		13.69	□□□□□ -0.22
SCJ1	YMR214W	DAT1	P13483	248 aa	Known RBP	13.68	□□□□□ -0.22
SCJ1	YMR214W	VPH2	P32341	215 aa		13.68	□□□□□ -0.22
SCJ1	YMR214W	YPT7	P32939	208 aa		13.68	□□□□□ -0.22
SCJ1	YMR214W	TPO5	P36029	618 aa		13.68	□□□□□ -0.22
SCJ1	YMR214W	SSZ1	P38788	538 aa	Known RBP	13.68	□□□□□ -0.22
SCJ1	YMR214W	SBE22	P38814	852 aa		13.68	□□□□□ -0.22
SCJ1	YMR214W	AST2	P39945	430 aa	Known RBP	13.68	□□□□□ -0.22
SCJ1	YMR214W	SWP82	P43554	623 aa		13.68	□□□□□ -0.22
SCJ1	YMR214W	TMA20	P89886	181 aa	Predicted RBP	13.68	□□□□□ -0.22
SCJ1	YMR214W	SPO19	Q03029	223 aa		13.68	□□□□□ -0.22
SCJ1	YMR214W	GIS1	Q03833	894 aa		13.68	□□□□□ -0.22
SCJ1	YMR214W	ARF1	P11076	181 aa	Known RBP	13.67	□□□□□ -0.22
SCJ1	YMR214W	TFS1	P14306	219 aa		13.67	□□□□□ -0.22
SCJ1	YMR214W	BRX1	Q08235	291 aa	Known RBP	13.67	□□□□□ -0.22
SCJ1	YMR214W	YGK3	Q12222	375 aa	Predicted RBP	13.67	□□□□□ -0.22
SCJ1	YMR214W	YOL162W	P0CF19	215 aa		13.66	□□□□□ -0.22
SCJ1	YMR214W	ERD1	P16151	362 aa		13.66	□□□□□ -0.22
SCJ1	YMR214W	GOS1	P38736	223 aa		13.66	□□□□□ -0.22
SCJ1	YMR214W	PEX18	P38855	283 aa		13.66	□□□□□ -0.22
SCJ1	YMR214W	YNL208W	P40159	199 aa	Known RBP	13.66	□□□□□ -0.22
SCJ1	YMR214W	LEM3	P42838	414 aa		13.66	□□□□□ -0.22
SCJ1	YMR214W	PLM2	Q04383	521 aa		13.66	□□□□□ -0.22
SCJ1	YMR214W	RDR1	Q08904	546 aa		13.66	□□□□□ -0.22
SCJ1	YMR214W	FMP40	Q08968	688 aa	Predicted RBP	13.66	□□□□□ -0.22

Retrieved 100 of 5,963 RNA–protein pairs in 34.5 ms