RNA–Protein interactions for RNA: YMR183C

SSO2, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO2, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO2YMR183C SLD5Q03406 294 aa3.43□□□□□ -1.86
SSO2YMR183C HER2Q03557 464 aa3.43□□□□□ -1.86
SSO2YMR183C RTT103Q05543 409 aa3.43□□□□□ -1.86
SSO2YMR183C SMC5Q08204 1093 aa3.43□□□□□ -1.86
SSO2YMR183C ERP3Q12403 225 aa3.43□□□□□ -1.86
SSO2YMR183C SET6Q12529 373 aa3.43□□□□□ -1.86
SSO2YMR183C YOR338WQ99326 363 aa3.43□□□□□ -1.86
SSO2YMR183C RAD1P06777 1100 aa3.42□□□□□ -1.86
SSO2YMR183C YAR066WP0CX18 203 aa3.42□□□□□ -1.86
SSO2YMR183C YHR214WP0CX19 203 aa3.42□□□□□ -1.86
SSO2YMR183C SPO12P17123 173 aa3.42□□□□□ -1.86
SSO2YMR183C MET16P18408 261 aaPredicted RBP3.42□□□□□ -1.86
SSO2YMR183C ARF2P19146 181 aaKnown RBP3.42□□□□□ -1.86
SSO2YMR183C ZRC1P20107 442 aa3.42□□□□□ -1.86
SSO2YMR183C DAL82P21705 255 aa3.42□□□□□ -1.86
SSO2YMR183C RPL24BP24000 155 aaKnown RBP3.42□□□□□ -1.86
SSO2YMR183C LSB5P25369 354 aa3.42□□□□□ -1.86
SSO2YMR183C SKT5P34226 696 aa3.42□□□□□ -1.86
SSO2YMR183C PRS4P38063 326 aaPredicted RBP3.42□□□□□ -1.86
SSO2YMR183C COA1P40452 197 aa3.42□□□□□ -1.86
SSO2YMR183C RTS2P40962 232 aa3.42□□□□□ -1.86
SSO2YMR183C YGR210CP42942 411 aa3.42□□□□□ -1.86
SSO2YMR183C AGP3P43548 558 aa3.42□□□□□ -1.86
SSO2YMR183C PXR1P53335 271 aaPredicted RBP3.42□□□□□ -1.86
SSO2YMR183C FRE4P53746 719 aa3.42□□□□□ -1.86
SSO2YMR183C GIS2P53849 153 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86not detected
SSO2YMR183C REX2P54964 269 aaKnown RBP3.42□□□□□ -1.86
SSO2YMR183C NUP100Q02629 959 aa3.42□□□□□ -1.86
SSO2YMR183C YPL080CQ02826 108 aa3.42□□□□□ -1.86
SSO2YMR183C BET5Q03630 159 aa3.42□□□□□ -1.86
SSO2YMR183C PBP4Q07362 185 aaKnown RBP3.42□□□□□ -1.86
SSO2YMR183C SDO1Q07953 250 aaKnown RBP3.42□□□□□ -1.86
SSO2YMR183C SRL2Q12020 392 aa3.42□□□□□ -1.86
SSO2YMR183C DAP1Q12091 152 aa3.42□□□□□ -1.86
SSO2YMR183C ORT1Q12375 292 aa3.42□□□□□ -1.86
SSO2YMR183C YOP1Q12402 180 aa3.42□□□□□ -1.86
SSO2YMR183C CMC2Q3E7A4 109 aa3.42□□□□□ -1.86
SSO2YMR183C YMR230W-AQ3E7B5 62 aa3.42□□□□□ -1.86
SSO2YMR183C EXO70P19658 623 aa3.41□□□□□ -1.86
SSO2YMR183C APA2P22108 325 aa3.41□□□□□ -1.86
SSO2YMR183C TOA2P32774 122 aa3.41□□□□□ -1.86
SSO2YMR183C RSM22P36056 628 aa3.41□□□□□ -1.86
SSO2YMR183C PHD1P36093 366 aa3.41□□□□□ -1.86
SSO2YMR183C SWD2P36104 329 aaPredicted RBP3.41□□□□□ -1.86
SSO2YMR183C TDA11P38854 504 aa3.41□□□□□ -1.86
SSO2YMR183C ATG7P38862 630 aa3.41□□□□□ -1.86
SSO2YMR183C HSH155P49955 971 aaKnown RBP3.41□□□□□ -1.86
SSO2YMR183C LIF1P53150 421 aa3.41□□□□□ -1.86
SSO2YMR183C SCW10Q04951 389 aa3.41□□□□□ -1.86
SSO2YMR183C BSC1Q12140 328 aa3.41□□□□□ -1.86
SSO2YMR183C MSH5Q12175 901 aa3.41□□□□□ -1.86
SSO2YMR183C NCA2Q12374 616 aa3.41□□□□□ -1.86
SSO2YMR183C SSK2P53599 1579 aa3.41□□□□□ -1.86
SSO2YMR183C RAD9P14737 1309 aa3.41□□□□□ -1.86
SSO2YMR183C FAR1P21268 830 aa3.4□□□□□ -1.87
SSO2YMR183C RBK1P25332 333 aa3.4□□□□□ -1.87
SSO2YMR183C RPS5P26783 225 aaKnown RBP3.4□□□□□ -1.87
SSO2YMR183C ACB1P31787 87 aa3.4□□□□□ -1.87
SSO2YMR183C TRS65P32893 560 aa3.4□□□□□ -1.87
SSO2YMR183C FRE2P36033 711 aa3.4□□□□□ -1.87
SSO2YMR183C DTR1P38125 572 aa3.4□□□□□ -1.87
SSO2YMR183C IST2P38250 946 aa3.4□□□□□ -1.87
SSO2YMR183C OSH3P38713 996 aaKnown RBP3.4□□□□□ -1.87
SSO2YMR183C AZR1P50080 613 aa3.4□□□□□ -1.87
SSO2YMR183C RMR1P53060 241 aa3.4□□□□□ -1.87
SSO2YMR183C LST7P53237 242 aa3.4□□□□□ -1.87
SSO2YMR183C OKP1P53298 406 aa3.4□□□□□ -1.87
SSO2YMR183C MKC7P53379 596 aa3.4□□□□□ -1.87
SSO2YMR183C CUS2P53830 285 aaPredicted RBP3.4□□□□□ -1.87
SSO2YMR183C ALG11P53954 548 aaKnown RBP3.4□□□□□ -1.87
SSO2YMR183C CRZ1P53968 678 aa3.4□□□□□ -1.87
SSO2YMR183C SPR6Q01684 191 aa3.4□□□□□ -1.87
SSO2YMR183C OST6Q03723 332 aa3.4□□□□□ -1.87
SSO2YMR183C YMR226CQ05016 267 aaKnown RBP3.4□□□□□ -1.87
SSO2YMR183C APC9Q12107 265 aa3.4□□□□□ -1.87
SSO2YMR183C YRA1Q12159 226 aaKnown RBP3.4□□□□□ -1.87
SSO2YMR183C CDC33P07260 213 aaKnown RBP3.39□□□□□ -1.87
SSO2YMR183C MATALPHA2P0CY08 210 aa3.39□□□□□ -1.87
SSO2YMR183C HMLALPHA2P0CY09 210 aa3.39□□□□□ -1.87
SSO2YMR183C REV1P12689 985 aa3.39□□□□□ -1.87
SSO2YMR183C HPR1P17629 752 aaKnown RBP3.39□□□□□ -1.87
SSO2YMR183C STE18P18852 110 aa3.39□□□□□ -1.87
SSO2YMR183C ERG9P29704 444 aa3.39□□□□□ -1.87
SSO2YMR183C PRP18P33411 251 aaPredicted RBP3.39□□□□□ -1.87
SSO2YMR183C MRPL10P36520 322 aa3.39□□□□□ -1.87
SSO2YMR183C RBG1P39729 369 aa3.39□□□□□ -1.87
SSO2YMR183C SIM1P40472 476 aa3.39□□□□□ -1.87
SSO2YMR183C SLM1P40485 686 aa3.39□□□□□ -1.87
SSO2YMR183C RRN9P53437 365 aa3.39□□□□□ -1.87
SSO2YMR183C CAF40P53829 373 aa3.39□□□□□ -1.87
SSO2YMR183C SED5Q01590 340 aa3.39□□□□□ -1.87
SSO2YMR183C MSS11Q03825 758 aa3.39□□□□□ -1.87
SSO2YMR183C YDR415CQ04033 374 aaPredicted RBP3.39□□□□□ -1.87
SSO2YMR183C SPO77Q06134 477 aa3.39□□□□□ -1.87
SSO2YMR183C POM33Q12164 279 aa3.39□□□□□ -1.87
SSO2YMR183C TIP41Q12199 356 aa3.39□□□□□ -1.87
SSO2YMR183C ARP6Q12509 438 aa3.39□□□□□ -1.87
SSO2YMR183C SEY1Q99287 776 aa3.39□□□□□ -1.87
SSO2YMR183C MYO2P19524 1574 aaKnown RBP3.38□□□□□ -1.87
SSO2YMR183C BNI1P41832 1953 aa3.38□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms