RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W RPS8BP0CX40 200 aaKnown RBP4.29□□□□□ -1.72
VPS36YLR417W MSI1P13712 422 aa4.29□□□□□ -1.72
VPS36YLR417W RPB5P20434 215 aa4.29□□□□□ -1.72
VPS36YLR417W BUD2P33314 1104 aa4.29□□□□□ -1.72
VPS36YLR417W VPS45P38932 577 aa4.29□□□□□ -1.72
VPS36YLR417W REE1P40893 198 aa4.29□□□□□ -1.72
VPS36YLR417W BUR2Q05949 395 aa4.29□□□□□ -1.72
VPS36YLR417W TY1B-DR3Q99231 1755 aa4.28□□□□□ -1.72
VPS36YLR417W NAM2P11325 894 aa4.28□□□□□ -1.72
VPS36YLR417W UGA1P17649 471 aa4.28□□□□□ -1.72
VPS36YLR417W DCC1P25559 380 aa4.28□□□□□ -1.72
VPS36YLR417W ERG9P29704 444 aa4.28□□□□□ -1.72
VPS36YLR417W FUN26P31381 517 aa4.28□□□□□ -1.72
VPS36YLR417W MKK1P32490 508 aa4.28□□□□□ -1.72
VPS36YLR417W SPO23P33757 523 aa4.28□□□□□ -1.72
VPS36YLR417W YKR015CP36111 568 aa4.28□□□□□ -1.72
VPS36YLR417W IML3P38265 245 aa4.28□□□□□ -1.72
VPS36YLR417W YHR218WP38899 603 aa4.28□□□□□ -1.72
VPS36YLR417W YJR085CP47131 105 aaKnown RBP4.28□□□□□ -1.72
VPS36YLR417W TAF6P53040 516 aa4.28□□□□□ -1.72
VPS36YLR417W MST27P53176 234 aa4.28□□□□□ -1.72
VPS36YLR417W PNC1P53184 216 aaKnown RBP4.28□□□□□ -1.72
VPS36YLR417W RPN14P53196 417 aa4.28□□□□□ -1.72
VPS36YLR417W BOR1P53838 576 aa4.28□□□□□ -1.72
VPS36YLR417W RVB1Q03940 463 aaKnown RBP4.28□□□□□ -1.72
VPS36YLR417W CSM3Q04659 317 aa4.28□□□□□ -1.72
VPS36YLR417W SUP35P05453 685 aaKnown RBP4.27□□□□□ -1.73
VPS36YLR417W DAL2P25335 343 aa4.27□□□□□ -1.73
VPS36YLR417W DEG1P31115 442 aaKnown RBP4.27□□□□□ -1.73
VPS36YLR417W AVT5P38176 459 aa4.27□□□□□ -1.73
VPS36YLR417W YPT35P38815 214 aaKnown RBP4.27□□□□□ -1.73
VPS36YLR417W RSM25P40496 264 aa4.27□□□□□ -1.73
VPS36YLR417W YJR030CP47101 745 aa4.27□□□□□ -1.73
VPS36YLR417W CLD1P53264 445 aa4.27□□□□□ -1.73
VPS36YLR417W YGR168CP53293 376 aa4.27□□□□□ -1.73
VPS36YLR417W LAP3Q01532 483 aaKnown RBP RIP-Chip data4.27□□□□□ -1.73not detected
VPS36YLR417W VPS60Q03390 229 aa4.27□□□□□ -1.73
VPS36YLR417W APC4Q04601 652 aa4.27□□□□□ -1.73
VPS36YLR417W HRI1Q05905 244 aaKnown RBP4.27□□□□□ -1.73
VPS36YLR417W MRPL23Q12487 163 aaPredicted RBP4.27□□□□□ -1.73
VPS36YLR417W YBT1P32386 1661 aa4.27□□□□□ -1.73
VPS36YLR417W CPR3P25719 182 aa4.26□□□□□ -1.73
VPS36YLR417W ACB1P31787 87 aa4.26□□□□□ -1.73
VPS36YLR417W SNM1P40993 198 aa4.26□□□□□ -1.73
VPS36YLR417W CTK3P46963 296 aaPredicted RBP4.26□□□□□ -1.73
VPS36YLR417W YMR010WQ03687 405 aa4.26□□□□□ -1.73
VPS36YLR417W ERV41Q04651 352 aa4.26□□□□□ -1.73
VPS36YLR417W RIF2Q06208 395 aa4.26□□□□□ -1.73
VPS36YLR417W UBA3Q99344 299 aa4.26□□□□□ -1.73
VPS36YLR417W RAD9P14737 1309 aa4.26□□□□□ -1.73
VPS36YLR417W LTE1P07866 1435 aa4.26□□□□□ -1.73
VPS36YLR417W TY2B-LR1P0C2J3 1770 aa4.26□□□□□ -1.73
VPS36YLR417W TY2B-FP0CX63 1770 aa4.26□□□□□ -1.73
VPS36YLR417W TY2B-GR2P0CX64 1770 aa4.26□□□□□ -1.73
VPS36YLR417W TY2B-CP25384 1770 aa4.26□□□□□ -1.73
VPS36YLR417W TY2B-DR2Q03494 1770 aa4.26□□□□□ -1.73
VPS36YLR417W TY1B-DR1Q03855 1755 aa4.26□□□□□ -1.73
VPS36YLR417W TY2B-DR3Q07791 1770 aaKnown RBP4.26□□□□□ -1.73
VPS36YLR417W TY2B-OR1Q12113 1770 aa4.26□□□□□ -1.73
VPS36YLR417W TY2B-DR1Q12472 1770 aa4.26□□□□□ -1.73
VPS36YLR417W TY2B-OR2Q12501 1770 aa4.26□□□□□ -1.73
VPS36YLR417W CAR2P07991 424 aaKnown RBP4.26□□□□□ -1.73
VPS36YLR417W RPL16AP26784 199 aaKnown RBP4.26□□□□□ -1.73
VPS36YLR417W MMS21P38632 267 aa4.26□□□□□ -1.73
VPS36YLR417W RTR1P40084 226 aaPredicted RBP4.26□□□□□ -1.73
VPS36YLR417W PAN6P40459 309 aa4.26□□□□□ -1.73
VPS36YLR417W INA22P40576 216 aa4.26□□□□□ -1.73
VPS36YLR417W CIN2P46670 268 aa4.26□□□□□ -1.73
VPS36YLR417W CMS1Q07897 291 aaKnown RBP4.26□□□□□ -1.73
VPS36YLR417W JID1Q12350 301 aa4.26□□□□□ -1.73
VPS36YLR417W DRS2P39524 1355 aa4.26□□□□□ -1.73
VPS36YLR417W CSE2P33308 149 aa4.25□□□□□ -1.73
VPS36YLR417W FET3P38993 636 aa4.25□□□□□ -1.73
VPS36YLR417W YCH1P42937 148 aa4.25□□□□□ -1.73
VPS36YLR417W YFR057WP43625 151 aa4.25□□□□□ -1.73
VPS36YLR417W GCD14P46959 383 aaPredicted RBP4.25□□□□□ -1.73
VPS36YLR417W PXR1P53335 271 aaPredicted RBP4.25□□□□□ -1.73
VPS36YLR417W IRC25Q07951 179 aa4.25□□□□□ -1.73
VPS36YLR417W DNL4Q08387 944 aaPredicted RBP4.25□□□□□ -1.73
VPS36YLR417W ALE1Q08548 619 aa4.25□□□□□ -1.73
VPS36YLR417W FDH1Q08911 376 aa4.25□□□□□ -1.73
VPS36YLR417W TMS1Q12116 473 aa4.25□□□□□ -1.73
VPS36YLR417W YDL199CQ12407 687 aa4.25□□□□□ -1.73
VPS36YLR417W HEM4P06174 275 aa4.24□□□□□ -1.73
VPS36YLR417W RPS18AP0CX55 146 aaKnown RBP4.24□□□□□ -1.73
VPS36YLR417W RPS18BP0CX56 146 aaPredicted RBP4.24□□□□□ -1.73
VPS36YLR417W PET123P17558 318 aa4.24□□□□□ -1.73
VPS36YLR417W RBK1P25332 333 aa4.24□□□□□ -1.73
VPS36YLR417W YUR1P26725 428 aa4.24□□□□□ -1.73
VPS36YLR417W NAM9P27929 486 aa4.24□□□□□ -1.73
VPS36YLR417W RPC25P35718 212 aa4.24□□□□□ -1.73
VPS36YLR417W RFS1P38234 210 aaKnown RBP4.24□□□□□ -1.73
VPS36YLR417W PEX18P38855 283 aa4.24□□□□□ -1.73
VPS36YLR417W HYR1P40581 163 aaKnown RBP4.24□□□□□ -1.73
VPS36YLR417W MEP2P41948 499 aa4.24□□□□□ -1.73
VPS36YLR417W CWC22P53333 577 aaKnown RBP4.24□□□□□ -1.73
VPS36YLR417W REX2P54964 269 aaKnown RBP4.24□□□□□ -1.73
VPS36YLR417W YMR111CQ04461 462 aaPredicted RBP4.24□□□□□ -1.73
VPS36YLR417W TY2B-BQ12491 1770 aa4.24□□□□□ -1.73
VPS36YLR417W MET5P47169 1442 aa4.24□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 50.5 ms