RNA–Protein interactions for RNA: YLR276C

DBP9, Transcript of DEAD-box protein required for 27S rRNA processing, yeast

Gene DBP9, Length 1,785 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBP9	YLR276C	LSB3	P43603	459 aa	Known RBP	5.37	□□□□□ -1.55
DBP9	YLR276C	LCL3	P53153	274 aa		5.37	□□□□□ -1.55
DBP9	YLR276C	ART5	P53244	586 aa	Known RBP	5.37	□□□□□ -1.55
DBP9	YLR276C	MAL12	P53341	584 aa		5.37	□□□□□ -1.55
DBP9	YLR276C	RCF2	P53721	224 aa		5.37	□□□□□ -1.55
DBP9	YLR276C	YNL095C	P53932	642 aa		5.37	□□□□□ -1.55
DBP9	YLR276C	SPR6	Q01684	191 aa		5.37	□□□□□ -1.55
DBP9	YLR276C	TIM44	Q01852	431 aa		5.37	□□□□□ -1.55
DBP9	YLR276C	OST6	Q03723	332 aa		5.37	□□□□□ -1.55
DBP9	YLR276C	YDR222W	Q04925	415 aa		5.37	□□□□□ -1.55
DBP9	YLR276C	DUS4	Q06063	367 aa		5.37	□□□□□ -1.55
DBP9	YLR276C	YDL057W	Q07379	328 aa		5.37	□□□□□ -1.55
DBP9	YLR276C	ESC8	Q08119	714 aa		5.37	□□□□□ -1.55
DBP9	YLR276C	PRS5	Q12265	496 aa	Known RBP	5.37	□□□□□ -1.55
DBP9	YLR276C	MIR1	P23641	311 aa	Known RBP	5.36	□□□□□ -1.55
DBP9	YLR276C	IFM1	P25038	676 aa		5.36	□□□□□ -1.55
DBP9	YLR276C	PPZ1	P26570	692 aa		5.36	□□□□□ -1.55
DBP9	YLR276C	YUR1	P26725	428 aa		5.36	□□□□□ -1.55
DBP9	YLR276C	AEP1	P32493	518 aa		5.36	□□□□□ -1.55
DBP9	YLR276C	SRY1	P36007	326 aa		5.36	□□□□□ -1.55
DBP9	YLR276C	AVT5	P38176	459 aa		5.36	□□□□□ -1.55
DBP9	YLR276C	VID24	P38263	362 aa		5.36	□□□□□ -1.55
DBP9	YLR276C	FTH1	P38310	465 aa		5.36	□□□□□ -1.55
DBP9	YLR276C	NSG1	P38837	291 aa		5.36	□□□□□ -1.55
DBP9	YLR276C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	5.36	□□□□□ -1.55	not detected
DBP9	YLR276C	IME4	P41833	600 aa		5.36	□□□□□ -1.55
DBP9	YLR276C	SKP2	P42843	763 aa		5.36	□□□□□ -1.55
DBP9	YLR276C	NSE4	P43124	402 aa		5.36	□□□□□ -1.55
DBP9	YLR276C	SNN1	P48232	102 aa		5.36	□□□□□ -1.55
DBP9	YLR276C	YPL113C	Q02961	396 aa		5.36	□□□□□ -1.55
DBP9	YLR276C	DPB4	Q04603	196 aa	Known RBP	5.36	□□□□□ -1.55
DBP9	YLR276C	CRF1	Q04930	467 aa		5.36	□□□□□ -1.55
DBP9	YLR276C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	5.36	□□□□□ -1.55	not detected
DBP9	YLR276C	KEL3	Q08979	651 aa	Predicted RBP	5.36	□□□□□ -1.55
DBP9	YLR276C	SWT1	Q12104	458 aa		5.36	□□□□□ -1.55
DBP9	YLR276C	LCB4	Q12246	624 aa		5.36	□□□□□ -1.55
DBP9	YLR276C	RBD2	Q12270	262 aa		5.36	□□□□□ -1.55
DBP9	YLR276C	SKS1	Q12505	502 aa		5.36	□□□□□ -1.55
DBP9	YLR276C	MYO1	P08964	1928 aa		5.36	□□□□□ -1.55
DBP9	YLR276C	YMR084W	A2P2R3	262 aa		5.35	□□□□□ -1.55
DBP9	YLR276C	RAD52	P06778	471 aa	Known RBP	5.35	□□□□□ -1.55
DBP9	YLR276C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	5.35	□□□□□ -1.55	not detected
DBP9	YLR276C	IMA3	P0CW40	589 aa		5.35	□□□□□ -1.55
DBP9	YLR276C	IMA4	P0CW41	589 aa		5.35	□□□□□ -1.55
DBP9	YLR276C	RPS1B	P23248	255 aa	Known RBP	5.35	□□□□□ -1.55
DBP9	YLR276C	HCM1	P25364	564 aa		5.35	□□□□□ -1.55
DBP9	YLR276C	CDC50	P25656	391 aa		5.35	□□□□□ -1.55
DBP9	YLR276C	POT1	P27796	417 aa	Known RBP RIP-Chip data	5.35	□□□□□ -1.55	not detected
DBP9	YLR276C	ATP7	P30902	174 aa		5.35	□□□□□ -1.55
DBP9	YLR276C	RPS1A	P33442	255 aa	Known RBP	5.35	□□□□□ -1.55
DBP9	YLR276C	OAR1	P35731	278 aa		5.35	□□□□□ -1.55
DBP9	YLR276C	REG2	P38232	338 aa		5.35	□□□□□ -1.55
DBP9	YLR276C	SSH1	P38353	490 aa	Known RBP	5.35	□□□□□ -1.55
DBP9	YLR276C	YHR182W	P38870	785 aa		5.35	□□□□□ -1.55
DBP9	YLR276C	YIL161W	P40449	235 aa	Known RBP	5.35	□□□□□ -1.55
DBP9	YLR276C	YIL024C	P40543	189 aa		5.35	□□□□□ -1.55
DBP9	YLR276C	SSU1	P41930	458 aa		5.35	□□□□□ -1.55
DBP9	YLR276C	IDP2	P41939	412 aa		5.35	□□□□□ -1.55
DBP9	YLR276C	ZIM17	P42844	174 aa		5.35	□□□□□ -1.55
DBP9	YLR276C	CUS2	P53830	285 aa	Predicted RBP	5.35	□□□□□ -1.55
DBP9	YLR276C	CAC2	Q04199	468 aa		5.35	□□□□□ -1.55
DBP9	YLR276C	NEJ1	Q06148	342 aa		5.35	□□□□□ -1.55
DBP9	YLR276C	IMA2	Q08295	589 aa		5.35	□□□□□ -1.55
DBP9	YLR276C	ATX2	Q12067	313 aa		5.35	□□□□□ -1.55
DBP9	YLR276C	NSL1	Q12143	216 aa		5.35	□□□□□ -1.55
DBP9	YLR276C	YDL177C	Q12257	170 aa		5.35	□□□□□ -1.55
DBP9	YLR276C	GIS3	Q12418	502 aa		5.35	□□□□□ -1.55
DBP9	YLR276C	AGC1	Q12482	902 aa		5.35	□□□□□ -1.55
DBP9	YLR276C	PCC1	Q3E833	88 aa		5.35	□□□□□ -1.55
DBP9	YLR276C	PMA1	P05030	918 aa	Known RBP	5.34	□□□□□ -1.55
DBP9	YLR276C	PHO80	P20052	293 aa		5.34	□□□□□ -1.55
DBP9	YLR276C	LRE1	P25579	583 aa	Known RBP	5.34	□□□□□ -1.55
DBP9	YLR276C	CSM1	P25651	190 aa		5.34	□□□□□ -1.55
DBP9	YLR276C	SRB5	P32585	307 aa		5.34	□□□□□ -1.55
DBP9	YLR276C	SUR1	P33300	382 aa		5.34	□□□□□ -1.55
DBP9	YLR276C	YNK1	P36010	153 aa	Known RBP	5.34	□□□□□ -1.55
DBP9	YLR276C	YBR013C	P38215	129 aa		5.34	□□□□□ -1.55
DBP9	YLR276C	COS8	P38723	381 aa		5.34	□□□□□ -1.55
DBP9	YLR276C	GTO1	P48239	356 aa		5.34	□□□□□ -1.55
DBP9	YLR276C	MNN10	P50108	393 aa	Known RBP	5.34	□□□□□ -1.55
DBP9	YLR276C	YGR066C	P53242	292 aa		5.34	□□□□□ -1.55
DBP9	YLR276C	OGG1	P53397	376 aa	Predicted RBP	5.34	□□□□□ -1.55
DBP9	YLR276C	PRM1	P53835	661 aa		5.34	□□□□□ -1.55
DBP9	YLR276C	MRPL22	P53881	309 aa		5.34	□□□□□ -1.55
DBP9	YLR276C	ERV25	P54837	211 aa	Known RBP	5.34	□□□□□ -1.55
DBP9	YLR276C	SMA1	Q02651	245 aa		5.34	□□□□□ -1.55
DBP9	YLR276C	PRM15	Q03262	622 aa		5.34	□□□□□ -1.55
DBP9	YLR276C	YMD8	Q03697	442 aa		5.34	□□□□□ -1.55
DBP9	YLR276C	CSN9	Q03981	162 aa		5.34	□□□□□ -1.55
DBP9	YLR276C	SMA2	Q04658	369 aa		5.34	□□□□□ -1.55
DBP9	YLR276C	DIB1	Q06819	143 aa	Predicted RBP	5.34	□□□□□ -1.55
DBP9	YLR276C	SNA4	Q07549	140 aa		5.34	□□□□□ -1.55
DBP9	YLR276C	DDC1	Q08949	612 aa		5.34	□□□□□ -1.55
DBP9	YLR276C	YPL199C	Q08954	240 aa		5.34	□□□□□ -1.55
DBP9	YLR276C	YDR018C	Q12185	396 aa		5.34	□□□□□ -1.55
DBP9	YLR276C	SFM1	Q12314	213 aa		5.34	□□□□□ -1.55
DBP9	YLR276C	FRE6	Q12473	712 aa		5.34	□□□□□ -1.55
DBP9	YLR276C	COS2	P0CX12	379 aa		5.34	□□□□□ -1.56
DBP9	YLR276C	COS3	P0CX13	379 aa		5.34	□□□□□ -1.56
DBP9	YLR276C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	5.34	□□□□□ -1.56	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms