RNA–Protein interactions for RNA: YLR055C

SPT8, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT8, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT8YLR055C PTI1P39927 425 aaPredicted RBP10.3□□□□□ -0.76
SPT8YLR055C FMP52P40008 231 aa10.3□□□□□ -0.76
SPT8YLR055C SNM1P40993 198 aa10.3□□□□□ -0.76
SPT8YLR055C AZF1P41696 914 aa10.3□□□□□ -0.76
SPT8YLR055C POP6P53218 158 aa10.3□□□□□ -0.76
SPT8YLR055C CSL4P53859 292 aaPredicted RBP10.3□□□□□ -0.76
SPT8YLR055C PRM15Q03262 622 aa10.3□□□□□ -0.76
SPT8YLR055C APC2Q12440 853 aa10.3□□□□□ -0.76
SPT8YLR055C PRE7P23724 241 aaKnown RBP10.3□□□□□ -0.76
SPT8YLR055C AHC2P25649 128 aa10.3□□□□□ -0.76
SPT8YLR055C MEP3P53390 489 aa10.3□□□□□ -0.76
SPT8YLR055C THI73Q07904 523 aa10.3□□□□□ -0.76
SPT8YLR055C YDL176WQ12027 708 aa10.3□□□□□ -0.76
SPT8YLR055C SKM1Q12469 655 aa10.3□□□□□ -0.76
SPT8YLR055C PCL9Q12477 304 aa10.3□□□□□ -0.76
SPT8YLR055C YLR099W-AQ3E798 87 aa10.3□□□□□ -0.76
SPT8YLR055C YHR213W-AQ8TGT4 77 aa10.3□□□□□ -0.76
SPT8YLR055C MOD5P07884 428 aa10.29□□□□□ -0.76
SPT8YLR055C RPS21AP0C0V8 87 aaKnown RBP10.29□□□□□ -0.76
SPT8YLR055C SHE2P36068 246 aaKnown RBP RIP-Chip data10.29□□□□□ -0.76not detected
SPT8YLR055C QDR1P40475 563 aa10.29□□□□□ -0.76
SPT8YLR055C LYS12P40495 371 aaKnown RBP10.29□□□□□ -0.76
SPT8YLR055C ZIM17P42844 174 aa10.29□□□□□ -0.76
SPT8YLR055C PAM16P42949 149 aa10.29□□□□□ -0.76
SPT8YLR055C CIS3P47001 227 aa10.29□□□□□ -0.76
SPT8YLR055C ATF2P53296 535 aa10.29□□□□□ -0.76
SPT8YLR055C SUN4P53616 420 aa10.29□□□□□ -0.76
SPT8YLR055C MNT4P53745 580 aa10.29□□□□□ -0.76
SPT8YLR055C ATG41Q12048 136 aa10.29□□□□□ -0.76
SPT8YLR055C HXT2P23585 541 aa10.28□□□□□ -0.76
SPT8YLR055C PPH21P23594 369 aa10.28□□□□□ -0.76
SPT8YLR055C CPR3P25719 182 aa10.28□□□□□ -0.76
SPT8YLR055C ACB1P31787 87 aa10.28□□□□□ -0.76
SPT8YLR055C MTC2P34246 357 aa10.28□□□□□ -0.76
SPT8YLR055C APL3P38065 1025 aa10.28□□□□□ -0.76
SPT8YLR055C GEP4P38812 185 aa10.28□□□□□ -0.76
SPT8YLR055C ELO1P39540 310 aa10.28□□□□□ -0.76
SPT8YLR055C AIM2P39721 246 aa10.28□□□□□ -0.76
SPT8YLR055C KXD1P53158 218 aa10.28□□□□□ -0.76
SPT8YLR055C ROT1Q03691 256 aa10.28□□□□□ -0.76
SPT8YLR055C OST6Q03723 332 aa10.28□□□□□ -0.76
SPT8YLR055C YDR249CQ03787 373 aa10.28□□□□□ -0.76
SPT8YLR055C SIZ1Q04195 904 aa10.28□□□□□ -0.76
SPT8YLR055C IPK1Q06667 281 aa10.28□□□□□ -0.76
SPT8YLR055C PFA4Q12006 378 aa10.28□□□□□ -0.76
SPT8YLR055C RTK1Q12100 620 aaPredicted RBP10.28□□□□□ -0.76
SPT8YLR055C TIR4Q12218 487 aaPredicted RBP10.28□□□□□ -0.76
SPT8YLR055C RPL3P14126 387 aaKnown RBP10.28□□□□□ -0.76
SPT8YLR055C CKS1P20486 150 aaKnown RBP10.28□□□□□ -0.76
SPT8YLR055C RNA14P25298 677 aaKnown RBP10.28□□□□□ -0.76
SPT8YLR055C CDC12P32468 407 aaKnown RBP10.28□□□□□ -0.76
SPT8YLR055C IFA38P38286 347 aa10.28□□□□□ -0.76
SPT8YLR055C YPT35P38815 214 aaKnown RBP10.28□□□□□ -0.76
SPT8YLR055C MSS4P38994 779 aa10.28□□□□□ -0.76
SPT8YLR055C MSC1Q03104 513 aa10.28□□□□□ -0.76
SPT8YLR055C MLC2Q06580 163 aa10.28□□□□□ -0.76
SPT8YLR055C YPR022CQ12139 1133 aa10.28□□□□□ -0.76
SPT8YLR055C RRP12Q12754 1228 aaKnown RBP10.28□□□□□ -0.76
SPT8YLR055C ERD2P18414 219 aa10.27□□□□□ -0.77
SPT8YLR055C TEF4P36008 412 aaKnown RBP10.27□□□□□ -0.77
SPT8YLR055C SRO77P38163 1010 aa10.27□□□□□ -0.77
SPT8YLR055C CCZ1P38273 704 aa10.27□□□□□ -0.77
SPT8YLR055C OSH7P38755 437 aa10.27□□□□□ -0.77
SPT8YLR055C HTD2P38790 280 aaKnown RBP10.27□□□□□ -0.77
SPT8YLR055C YER184CP39961 794 aa10.27□□□□□ -0.77
SPT8YLR055C LTP1P40347 161 aa10.27□□□□□ -0.77
SPT8YLR055C YIL165CP40446 119 aa10.27□□□□□ -0.77
SPT8YLR055C CIN1P40987 1014 aa10.27□□□□□ -0.77
SPT8YLR055C SPT20P50875 604 aa10.27□□□□□ -0.77
SPT8YLR055C SCY1P53009 804 aa10.27□□□□□ -0.77
SPT8YLR055C MTQ1P53944 314 aa10.27□□□□□ -0.77
SPT8YLR055C YOL107WQ12239 342 aa10.27□□□□□ -0.77
SPT8YLR055C RKM5Q12367 367 aa10.27□□□□□ -0.77
SPT8YLR055C HRP1Q99383 534 aaKnown RBP10.27□□□□□ -0.77
SPT8YLR055C RPS17AP02407 136 aaKnown RBP10.26□□□□□ -0.77
SPT8YLR055C MRP2P10663 115 aaPredicted RBP10.26□□□□□ -0.77
SPT8YLR055C RPS17BP14127 136 aaKnown RBP10.26□□□□□ -0.77
SPT8YLR055C PRE4P30657 266 aa10.26□□□□□ -0.77
SPT8YLR055C KRE6P32486 720 aa10.26□□□□□ -0.77
SPT8YLR055C MGM101P32787 269 aaKnown RBP10.26□□□□□ -0.77
SPT8YLR055C TRM7P38238 310 aaKnown RBP10.26□□□□□ -0.77
SPT8YLR055C GGC1P38988 300 aa10.26□□□□□ -0.77
SPT8YLR055C PKP1P40530 394 aa10.26□□□□□ -0.77
SPT8YLR055C PSA1P41940 361 aaKnown RBP10.26□□□□□ -0.77
SPT8YLR055C RPE1P46969 238 aa10.26□□□□□ -0.77
SPT8YLR055C NUP57P48837 541 aa10.26□□□□□ -0.77
SPT8YLR055C COS12P53053 380 aa10.26□□□□□ -0.77
SPT8YLR055C SGF73P53165 657 aa10.26□□□□□ -0.77
SPT8YLR055C VOA1P53262 265 aa10.26□□□□□ -0.77
SPT8YLR055C SLI1P53304 468 aa10.26□□□□□ -0.77
SPT8YLR055C HXT11P54862 567 aa10.26□□□□□ -0.77
SPT8YLR055C PLM2Q04383 521 aa10.26□□□□□ -0.77
SPT8YLR055C YML096WQ04489 525 aa10.26□□□□□ -0.77
SPT8YLR055C BOP2Q06150 570 aa10.26□□□□□ -0.77
SPT8YLR055C POL2P21951 2222 aaKnown RBP10.26□□□□□ -0.77
SPT8YLR055C AAC1P04710 309 aa10.26□□□□□ -0.77
SPT8YLR055C NHP6BP11633 99 aaKnown RBP10.26□□□□□ -0.77
SPT8YLR055C SNF5P18480 905 aa10.26□□□□□ -0.77
SPT8YLR055C RPA135P22138 1203 aaKnown RBP10.26□□□□□ -0.77
SPT8YLR055C PRP28P23394 588 aa10.26□□□□□ -0.77
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms