RNA–Protein interactions for RNA: YKR043C

SHB17, Transcript of Sedoheptulose bisphosphatase involved in riboneogenesis, yeastyeast

Gene SHB17, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHB17YKR043C YDR239CQ03780 787 aa9.21□□□□□ -0.94
SHB17YKR043C GAS2Q06135 555 aa9.21□□□□□ -0.94
SHB17YKR043C YLR352WQ06479 807 aa9.21□□□□□ -0.94
SHB17YKR043C SYO1Q07395 620 aa9.21□□□□□ -0.94
SHB17YKR043C VIK1Q12045 647 aa9.21□□□□□ -0.94
SHB17YKR043C YDL109CQ12103 647 aa9.21□□□□□ -0.94
SHB17YKR043C NFI1Q12216 726 aa9.21□□□□□ -0.94
SHB17YKR043C MRPS28P21771 286 aa9.2□□□□□ -0.94
SHB17YKR043C SCO1P23833 295 aa9.2□□□□□ -0.94
SHB17YKR043C NFS1P25374 497 aa9.2□□□□□ -0.94
SHB17YKR043C RHB1P25378 209 aa9.2□□□□□ -0.94
SHB17YKR043C ASF2P32448 525 aaPredicted RBP9.2□□□□□ -0.94
SHB17YKR043C ZUO1P32527 433 aaKnown RBP9.2□□□□□ -0.94
SHB17YKR043C ARC19P33204 171 aaKnown RBP9.2□□□□□ -0.94
SHB17YKR043C MDL1P33310 695 aa9.2□□□□□ -0.94
SHB17YKR043C AST1P35183 429 aa9.2□□□□□ -0.94
SHB17YKR043C SRO77P38163 1010 aa9.2□□□□□ -0.94
SHB17YKR043C BAT2P47176 376 aaKnown RBP9.2□□□□□ -0.94
SHB17YKR043C RBG2P53295 368 aaKnown RBP9.2□□□□□ -0.94
SHB17YKR043C COX20Q04935 205 aa9.2□□□□□ -0.94
SHB17YKR043C RSA1Q08932 381 aa9.2□□□□□ -0.94
SHB17YKR043C SFG1Q12507 346 aa9.2□□□□□ -0.94
SHB17YKR043C HSP30P25619 332 aa9.19□□□□□ -0.94
SHB17YKR043C UBC8P28263 218 aa9.19□□□□□ -0.94
SHB17YKR043C TIM12P32830 109 aa9.19□□□□□ -0.94
SHB17YKR043C SPO73P40031 143 aa9.19□□□□□ -0.94
SHB17YKR043C PRM8P53174 237 aa9.19□□□□□ -0.94
SHB17YKR043C YGR168CP53293 376 aa9.19□□□□□ -0.94
SHB17YKR043C YNL092WP53934 400 aa9.19□□□□□ -0.94
SHB17YKR043C HOT1Q03213 719 aa9.19□□□□□ -0.94
SHB17YKR043C SEC13Q04491 297 aaKnown RBP9.19□□□□□ -0.94
SHB17YKR043C DTD1Q07648 150 aaKnown RBP9.19□□□□□ -0.94
SHB17YKR043C BAG7Q12128 409 aa9.19□□□□□ -0.94
SHB17YKR043C HER1Q12276 1246 aa9.19□□□□□ -0.94
SHB17YKR043C YLR126CQ12288 251 aa9.19□□□□□ -0.94
SHB17YKR043C YPR015CQ12531 247 aa9.19□□□□□ -0.94
SHB17YKR043C RPC40P07703 335 aaKnown RBP9.18□□□□□ -0.94
SHB17YKR043C STE12P13574 688 aa9.18□□□□□ -0.94
SHB17YKR043C YPK2P18961 677 aa9.18□□□□□ -0.94
SHB17YKR043C PTC6P25646 442 aa9.18□□□□□ -0.94
SHB17YKR043C YEF1P32622 495 aa9.18□□□□□ -0.94
SHB17YKR043C MRPL6P32904 214 aa9.18□□□□□ -0.94
SHB17YKR043C MDJ1P35191 511 aa9.18□□□□□ -0.94
SHB17YKR043C SKN7P38889 622 aa9.18□□□□□ -0.94
SHB17YKR043C SHO1P40073 367 aa9.18□□□□□ -0.94
SHB17YKR043C PRE6P40303 254 aaKnown RBP9.18□□□□□ -0.94
SHB17YKR043C MDJ2P42834 146 aa9.18□□□□□ -0.94
SHB17YKR043C FAR7P43592 221 aa9.18□□□□□ -0.94
SHB17YKR043C YGL235WP53071 178 aa9.18□□□□□ -0.94
SHB17YKR043C YGR066CP53242 292 aa9.18□□□□□ -0.94
SHB17YKR043C YPL039WQ03080 316 aa9.18□□□□□ -0.94
SHB17YKR043C RDL2Q08742 149 aaKnown RBP9.18□□□□□ -0.94
SHB17YKR043C BTS1Q12051 335 aa9.18□□□□□ -0.94
SHB17YKR043C YOL162WP0CF19 215 aa9.17□□□□□ -0.94
SHB17YKR043C FBA1P14540 359 aaKnown RBP9.17□□□□□ -0.94
SHB17YKR043C PDX1P16451 410 aa9.17□□□□□ -0.94
SHB17YKR043C RRP7P25368 297 aaPredicted RBP9.17□□□□□ -0.94
SHB17YKR043C PTP2P29461 750 aa9.17□□□□□ -0.94
SHB17YKR043C SNC1P31109 117 aa9.17□□□□□ -0.94
SHB17YKR043C YAR028WP39548 234 aa9.17□□□□□ -0.94
SHB17YKR043C YIL166CP40445 542 aa9.17□□□□□ -0.94
SHB17YKR043C BNA3P47039 444 aaKnown RBP9.17□□□□□ -0.94
SHB17YKR043C OGG1P53397 376 aaPredicted RBP9.17□□□□□ -0.94
SHB17YKR043C HRI1Q05905 244 aaKnown RBP9.17□□□□□ -0.94
SHB17YKR043C RLM1Q12224 676 aa9.17□□□□□ -0.94
SHB17YKR043C CBP6P07253 162 aaPredicted RBP9.16□□□□□ -0.94
SHB17YKR043C MDH2P22133 377 aa9.16□□□□□ -0.94
SHB17YKR043C HIS7P33734 552 aaKnown RBP9.16□□□□□ -0.94
SHB17YKR043C LHS1P36016 881 aa9.16□□□□□ -0.94
SHB17YKR043C JEN1P36035 616 aa9.16□□□□□ -0.94
SHB17YKR043C CTF8P38877 133 aa9.16□□□□□ -0.94
SHB17YKR043C THO1P40040 218 aaKnown RBP9.16□□□□□ -0.94
SHB17YKR043C COG3P40094 801 aa9.16□□□□□ -0.94
SHB17YKR043C SNL1P40548 159 aa9.16□□□□□ -0.94
SHB17YKR043C HSV2P50079 448 aaPredicted RBP9.16□□□□□ -0.94
SHB17YKR043C YMR226CQ05016 267 aaKnown RBP9.16□□□□□ -0.94
SHB17YKR043C YPR127WQ06494 345 aa9.16□□□□□ -0.94
SHB17YKR043C COX17Q12287 69 aa9.16□□□□□ -0.94
SHB17YKR043C APC2Q12440 853 aa9.16□□□□□ -0.94
SHB17YKR043C AIM17P23180 465 aaKnown RBP9.15□□□□□ -0.94
SHB17YKR043C POL4P25615 582 aa9.15□□□□□ -0.94
SHB17YKR043C TRS65P32893 560 aa9.15□□□□□ -0.94
SHB17YKR043C SLC1P33333 303 aa9.15□□□□□ -0.94
SHB17YKR043C SLM4P38247 162 aa9.15□□□□□ -0.94
SHB17YKR043C MGE1P38523 228 aa9.15□□□□□ -0.94
SHB17YKR043C XBP1P40489 647 aa9.15□□□□□ -0.94
SHB17YKR043C DAM1P53267 343 aa9.15□□□□□ -0.94
SHB17YKR043C YGR126WP53274 230 aa9.15□□□□□ -0.94
SHB17YKR043C MPP6P53725 186 aaPredicted RBP9.15□□□□□ -0.94
SHB17YKR043C YNR062CP53748 327 aa9.15□□□□□ -0.94
SHB17YKR043C UTP21Q06078 939 aaPredicted RBP9.15□□□□□ -0.94
SHB17YKR043C IRC19Q07843 230 aa9.15□□□□□ -0.94
SHB17YKR043C COQ10Q08058 207 aa9.15□□□□□ -0.94
SHB17YKR043C NTG2Q08214 380 aa9.15□□□□□ -0.94
SHB17YKR043C YPL191CQ08930 360 aa9.15□□□□□ -0.94
SHB17YKR043C GRE1Q08969 168 aa9.15□□□□□ -0.94
SHB17YKR043C CAR2P07991 424 aaKnown RBP9.14□□□□□ -0.95
SHB17YKR043C NUP1P20676 1076 aa9.14□□□□□ -0.95
SHB17YKR043C UTR1P21373 530 aa9.14□□□□□ -0.95
SHB17YKR043C PUP2P32379 260 aa9.14□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 53.3 ms