RNA–Protein interactions for RNA: YHR150W

PEX28, Transcript of Peroxisomal integral membrane peroxin, yeastyeast

Gene PEX28, Length 1,740 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX28YHR150W ERG1P32476 496 aaKnown RBP6.98□□□□□ -1.29
PEX28YHR150W TEF4P36008 412 aaKnown RBP6.98□□□□□ -1.29
PEX28YHR150W EHT1P38295 451 aa6.98□□□□□ -1.29
PEX28YHR150W YIL108WP40483 696 aaKnown RBP6.98□□□□□ -1.29
PEX28YHR150W NEO1P40527 1151 aa6.98□□□□□ -1.29
PEX28YHR150W CIN1P40987 1014 aa6.98□□□□□ -1.29
PEX28YHR150W BNA6P43619 295 aa6.98□□□□□ -1.29
PEX28YHR150W YJL049WP47048 450 aa6.98□□□□□ -1.29
PEX28YHR150W BAT2P47176 376 aaKnown RBP6.98□□□□□ -1.29
PEX28YHR150W YGR266WP53326 701 aa6.98□□□□□ -1.29
PEX28YHR150W YVH1Q02256 364 aaKnown RBP6.98□□□□□ -1.29
PEX28YHR150W ISU1Q03020 165 aa6.98□□□□□ -1.29
PEX28YHR150W CTL1Q03220 320 aaKnown RBP6.98□□□□□ -1.29
PEX28YHR150W MTQ2Q03920 221 aaPredicted RBP6.98□□□□□ -1.29
PEX28YHR150W HPF1Q05164 967 aa6.98□□□□□ -1.29
PEX28YHR150W RRP9Q06506 573 aaKnown RBP6.98□□□□□ -1.29
PEX28YHR150W MEX67Q99257 599 aaKnown RBP6.98□□□□□ -1.29
PEX28YHR150W URA3P03962 267 aa6.98□□□□□ -1.29
PEX28YHR150W PRE7P23724 241 aaKnown RBP6.98□□□□□ -1.29
PEX28YHR150W YCR100CP25606 316 aa6.98□□□□□ -1.29
PEX28YHR150W AHC2P25649 128 aa6.98□□□□□ -1.29
PEX28YHR150W CDC12P32468 407 aaKnown RBP6.98□□□□□ -1.29
PEX28YHR150W LST4P34239 828 aa6.98□□□□□ -1.29
PEX28YHR150W FMO1P38866 432 aa6.98□□□□□ -1.29
PEX28YHR150W BAT1P38891 393 aaKnown RBP6.98□□□□□ -1.29
PEX28YHR150W RTT105P40063 208 aa6.98□□□□□ -1.29
PEX28YHR150W YPL068CQ02749 293 aa6.98□□□□□ -1.29
PEX28YHR150W IPK1Q06667 281 aa6.98□□□□□ -1.29
PEX28YHR150W YOL162WP0CF19 215 aa6.97□□□□□ -1.29
PEX28YHR150W RPA135P22138 1203 aaKnown RBP6.97□□□□□ -1.29
PEX28YHR150W APN1P22936 367 aa6.97□□□□□ -1.29
PEX28YHR150W PPH21P23594 369 aa6.97□□□□□ -1.29
PEX28YHR150W FUN26P31381 517 aa6.97□□□□□ -1.29
PEX28YHR150W MTC2P34246 357 aa6.97□□□□□ -1.29
PEX28YHR150W SHE2P36068 246 aaKnown RBP RIP-Chip data6.97□□□□□ -1.29not detected
PEX28YHR150W MRPL37P36532 105 aa6.97□□□□□ -1.29
PEX28YHR150W RRP4P38792 359 aaKnown RBP6.97□□□□□ -1.29
PEX28YHR150W CHL4P38907 458 aa6.97□□□□□ -1.29
PEX28YHR150W FET3P38993 636 aa6.97□□□□□ -1.29
PEX28YHR150W LYS1P38998 373 aaRIP-Chip data6.97□□□□□ -1.29not detected
PEX28YHR150W TOS2P50078 622 aa6.97□□□□□ -1.29
PEX28YHR150W MNN10P50108 393 aaKnown RBP6.97□□□□□ -1.29
PEX28YHR150W HOS2P53096 452 aaPredicted RBP6.97□□□□□ -1.29
PEX28YHR150W PGA1P53896 198 aa6.97□□□□□ -1.29
PEX28YHR150W YKR011CQ02209 353 aa6.97□□□□□ -1.29
PEX28YHR150W NAT4Q04751 285 aa6.97□□□□□ -1.29
PEX28YHR150W YFT2Q06676 274 aa6.97□□□□□ -1.29
PEX28YHR150W ASR1Q06834 288 aa6.97□□□□□ -1.29
PEX28YHR150W ATG41Q12048 136 aa6.97□□□□□ -1.29
PEX28YHR150W TPO4Q12256 659 aa6.97□□□□□ -1.29
PEX28YHR150W AI4P03878 556 aa6.96□□□□□ -1.29
PEX28YHR150W EXG1P23776 448 aaKnown RBP6.96□□□□□ -1.29
PEX28YHR150W BUB3P26449 341 aa6.96□□□□□ -1.29
PEX28YHR150W PRE4P30657 266 aa6.96□□□□□ -1.29
PEX28YHR150W SKN1P33336 771 aa6.96□□□□□ -1.29
PEX28YHR150W GID8P40208 455 aa6.96□□□□□ -1.29
PEX28YHR150W RPL10P41805 221 aaKnown RBP6.96□□□□□ -1.29
PEX28YHR150W COS10P52924 374 aa6.96□□□□□ -1.29
PEX28YHR150W MAL11P53048 616 aa6.96□□□□□ -1.29
PEX28YHR150W CWC24P53769 259 aa6.96□□□□□ -1.29
PEX28YHR150W MAP1Q01662 387 aaKnown RBP RIP-Chip data6.96□□□□□ -1.29not detected
PEX28YHR150W PLM2Q04383 521 aa6.96□□□□□ -1.29
PEX28YHR150W YML096WQ04489 525 aa6.96□□□□□ -1.29
PEX28YHR150W YLR283WQ05867 314 aa6.96□□□□□ -1.29
PEX28YHR150W ARV1Q06541 321 aa6.96□□□□□ -1.29
PEX28YHR150W YPR022CQ12139 1133 aa6.96□□□□□ -1.29
PEX28YHR150W MSB2P32334 1306 aa6.96□□□□□ -1.3
PEX28YHR150W KIN28P06242 306 aa6.96□□□□□ -1.3
PEX28YHR150W MGR1P25573 417 aa6.96□□□□□ -1.3
PEX28YHR150W PUB1P32588 453 aaKnown RBP RIP-Chip data6.96□□□□□ -1.3not detected
PEX28YHR150W ORC2P32833 620 aa6.96□□□□□ -1.3
PEX28YHR150W RPC34P32910 317 aa6.96□□□□□ -1.3
PEX28YHR150W SDS22P36047 338 aa6.96□□□□□ -1.3
PEX28YHR150W SRX1P36077 127 aa6.96□□□□□ -1.3
PEX28YHR150W OMA1P36163 345 aa6.96□□□□□ -1.3
PEX28YHR150W NAT2P37293 288 aa6.96□□□□□ -1.3
PEX28YHR150W PAU24P38155 120 aa6.96□□□□□ -1.3
PEX28YHR150W YHR097CP38809 366 aaKnown RBP6.96□□□□□ -1.3
PEX28YHR150W YAL037WP39728 267 aa6.96□□□□□ -1.3
PEX28YHR150W PZF1P39933 429 aa6.96□□□□□ -1.3
PEX28YHR150W TED1P40533 473 aa6.96□□□□□ -1.3
PEX28YHR150W TIR3P40552 269 aa6.96□□□□□ -1.3
PEX28YHR150W APS3P47064 194 aa6.96□□□□□ -1.3
PEX28YHR150W MDE1P47095 244 aa6.96□□□□□ -1.3
PEX28YHR150W GNP1P48813 663 aa6.96□□□□□ -1.3
PEX28YHR150W PPT1P53043 513 aa6.96□□□□□ -1.3
PEX28YHR150W YMR252CQ04814 134 aa6.96□□□□□ -1.3
PEX28YHR150W YMR315WQ04869 349 aaKnown RBP6.96□□□□□ -1.3
PEX28YHR150W YLR224WQ05947 369 aa6.96□□□□□ -1.3
PEX28YHR150W CRT10Q08226 957 aa6.96□□□□□ -1.3
PEX28YHR150W PUS9Q12069 462 aa6.96□□□□□ -1.3
PEX28YHR150W YGL194C-AQ2V2P6 80 aa6.96□□□□□ -1.3
PEX28YHR150W HIS3P06633 220 aa6.95□□□□□ -1.3
PEX28YHR150W HCM1P25364 564 aa6.95□□□□□ -1.3
PEX28YHR150W SFA1P32771 386 aa6.95□□□□□ -1.3
PEX28YHR150W TAF14P35189 244 aa6.95□□□□□ -1.3
PEX28YHR150W OAR1P35731 278 aa6.95□□□□□ -1.3
PEX28YHR150W ANR2P36090 516 aaPredicted RBP6.95□□□□□ -1.3
PEX28YHR150W MRPL3P36516 390 aa6.95□□□□□ -1.3
PEX28YHR150W ECM34P38728 170 aa6.95□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 9.2 ms