RNA–Protein interactions for RNA: YGR271C-A

EFG1, Essential protein required for maturation of 18S rRNA, yeastyeast

Gene EFG1, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EFG1YGR271C-A RPL5P26321 297 aaKnown RBP2.84□□□□□ -1.95
EFG1YGR271C-A CWP1P28319 239 aa2.84□□□□□ -1.95
EFG1YGR271C-A ZIP1P31111 875 aa2.84□□□□□ -1.95
EFG1YGR271C-A RME1P32338 300 aaKnown RBP2.84□□□□□ -1.95
EFG1YGR271C-A AIM29P36154 155 aa2.84□□□□□ -1.95
EFG1YGR271C-A YBR137WP38276 179 aa2.84□□□□□ -1.95
EFG1YGR271C-A FET3P38993 636 aa2.84□□□□□ -1.95
EFG1YGR271C-A YAL037WP39728 267 aa2.84□□□□□ -1.95
EFG1YGR271C-A YER079WP40052 210 aaKnown RBP2.84□□□□□ -1.95
EFG1YGR271C-A LCP5P40079 357 aaPredicted RBP2.84□□□□□ -1.95
EFG1YGR271C-A YAR1P46683 200 aa2.84□□□□□ -1.95
EFG1YGR271C-A KAP114P53067 1004 aa2.84□□□□□ -1.95
EFG1YGR271C-A YGR117CP53270 476 aa2.84□□□□□ -1.95
EFG1YGR271C-A DSL1P53847 754 aa2.84□□□□□ -1.95
EFG1YGR271C-A HXT11P54862 567 aa2.84□□□□□ -1.95
EFG1YGR271C-A SPP2Q02521 185 aa2.84□□□□□ -1.95
EFG1YGR271C-A GIP3Q03016 1276 aa2.84□□□□□ -1.95
EFG1YGR271C-A BNA7Q04066 261 aa2.84□□□□□ -1.95
EFG1YGR271C-A URH1Q04179 340 aa2.84□□□□□ -1.95
EFG1YGR271C-A COX20Q04935 205 aa2.84□□□□□ -1.95
EFG1YGR271C-A PRP46Q12417 451 aaPredicted RBP2.84□□□□□ -1.95
EFG1YGR271C-A ATG31Q12421 196 aa2.84□□□□□ -1.95
EFG1YGR271C-A YPR1Q12458 312 aa2.84□□□□□ -1.95
EFG1YGR271C-A SSK22P25390 1331 aaPredicted RBP2.84□□□□□ -1.96
EFG1YGR271C-A TDH2P00358 332 aaKnown RBP2.83□□□□□ -1.96
EFG1YGR271C-A TDH3P00359 332 aaKnown RBP RIP-Chip data2.83□□□□□ -1.96not detected
EFG1YGR271C-A COX2P00410 251 aa2.83□□□□□ -1.96
EFG1YGR271C-A HIS4P00815 799 aaKnown RBP2.83□□□□□ -1.96
EFG1YGR271C-A RAD3P06839 778 aa2.83□□□□□ -1.96
EFG1YGR271C-A MAS2P11914 482 aa2.83□□□□□ -1.96
EFG1YGR271C-A CSM1P25651 190 aa2.83□□□□□ -1.96
EFG1YGR271C-A TIP1P27654 210 aaPredicted RBP2.83□□□□□ -1.96
EFG1YGR271C-A PRR1P28708 518 aa2.83□□□□□ -1.96
EFG1YGR271C-A APE2P32454 952 aaKnown RBP2.83□□□□□ -1.96
EFG1YGR271C-A YCR041WP37265 110 aa2.83□□□□□ -1.96
EFG1YGR271C-A MAL32P38158 584 aa2.83□□□□□ -1.96
EFG1YGR271C-A SBE22P38814 852 aa2.83□□□□□ -1.96
EFG1YGR271C-A YHR182WP38870 785 aa2.83□□□□□ -1.96
EFG1YGR271C-A PRM9P39551 298 aa2.83□□□□□ -1.96
EFG1YGR271C-A BTT1P40314 149 aaPredicted RBP2.83□□□□□ -1.96
EFG1YGR271C-A LYS12P40495 371 aaKnown RBP2.83□□□□□ -1.96
EFG1YGR271C-A MRX5P47007 382 aa2.83□□□□□ -1.96
EFG1YGR271C-A YJL118WP47022 219 aa2.83□□□□□ -1.96
EFG1YGR271C-A PMT5P52867 743 aa2.83□□□□□ -1.96
EFG1YGR271C-A MTM1P53320 366 aa2.83□□□□□ -1.96
EFG1YGR271C-A MAL12P53341 584 aa2.83□□□□□ -1.96
EFG1YGR271C-A YIF1P53845 314 aaKnown RBP2.83□□□□□ -1.96
EFG1YGR271C-A HAL1Q01766 294 aa2.83□□□□□ -1.96
EFG1YGR271C-A MMT1Q03218 510 aa2.83□□□□□ -1.96
EFG1YGR271C-A UBX2Q04228 584 aa2.83□□□□□ -1.96
EFG1YGR271C-A AIM33Q04516 312 aa2.83□□□□□ -1.96
EFG1YGR271C-A BUR2Q05949 395 aa2.83□□□□□ -1.96
EFG1YGR271C-A SNT309Q06091 175 aaPredicted RBP2.83□□□□□ -1.96
EFG1YGR271C-A GMC2Q06201 188 aa2.83□□□□□ -1.96
EFG1YGR271C-A SLF1Q12034 447 aaKnown RBP2.83□□□□□ -1.96
EFG1YGR271C-A GET4Q12125 312 aa2.83□□□□□ -1.96
EFG1YGR271C-A ATG34Q12292 412 aa2.83□□□□□ -1.96
EFG1YGR271C-A UBA3Q99344 299 aa2.83□□□□□ -1.96
EFG1YGR271C-A OPI3P05375 206 aa2.82□□□□□ -1.96
EFG1YGR271C-A IMA3P0CW40 589 aa2.82□□□□□ -1.96
EFG1YGR271C-A IMA4P0CW41 589 aa2.82□□□□□ -1.96
EFG1YGR271C-A ARF1P11076 181 aaKnown RBP2.82□□□□□ -1.96
EFG1YGR271C-A FRS2P15625 503 aaKnown RBP2.82□□□□□ -1.96
EFG1YGR271C-A HSP26P15992 214 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
EFG1YGR271C-A YPK2P18961 677 aa2.82□□□□□ -1.96
EFG1YGR271C-A CKI1P20485 582 aa2.82□□□□□ -1.96
EFG1YGR271C-A OSM1P21375 501 aaKnown RBP2.82□□□□□ -1.96
EFG1YGR271C-A PCL1P24867 279 aa2.82□□□□□ -1.96
EFG1YGR271C-A GCG1P32656 232 aaKnown RBP2.82□□□□□ -1.96
EFG1YGR271C-A COS9P36034 407 aa2.82□□□□□ -1.96
EFG1YGR271C-A UTH1P36135 365 aa2.82□□□□□ -1.96
EFG1YGR271C-A MMS21P38632 267 aa2.82□□□□□ -1.96
EFG1YGR271C-A YHB1P39676 399 aaKnown RBP2.82□□□□□ -1.96
EFG1YGR271C-A MMF1P40185 145 aaKnown RBP2.82□□□□□ -1.96
EFG1YGR271C-A UTP18P40362 594 aaPredicted RBP2.82□□□□□ -1.96
EFG1YGR271C-A NCA3P46955 337 aa2.82□□□□□ -1.96
EFG1YGR271C-A HAM1P47119 197 aaKnown RBP2.82□□□□□ -1.96
EFG1YGR271C-A YGR168CP53293 376 aa2.82□□□□□ -1.96
EFG1YGR271C-A SLT2Q00772 484 aa2.82□□□□□ -1.96
EFG1YGR271C-A YMR181CQ03231 154 aa2.82□□□□□ -1.96
EFG1YGR271C-A YDR387CQ04162 555 aa2.82□□□□□ -1.96
EFG1YGR271C-A SMP3Q04174 516 aa2.82□□□□□ -1.96
EFG1YGR271C-A PAM18Q07914 168 aa2.82□□□□□ -1.96
EFG1YGR271C-A SMC5Q08204 1093 aa2.82□□□□□ -1.96
EFG1YGR271C-A LDS2Q08218 356 aa2.82□□□□□ -1.96
EFG1YGR271C-A IMA2Q08295 589 aa2.82□□□□□ -1.96
EFG1YGR271C-A RAX1Q08760 435 aa2.82□□□□□ -1.96
EFG1YGR271C-A YPR022CQ12139 1133 aa2.82□□□□□ -1.96
EFG1YGR271C-A SIA1Q12212 622 aa2.82□□□□□ -1.96
EFG1YGR271C-A CMC2Q3E7A4 109 aa2.82□□□□□ -1.96
EFG1YGR271C-A IKI3Q06706 1349 aaKnown RBP2.82□□□□□ -1.96
EFG1YGR271C-A RAD7P06779 565 aa2.81□□□□□ -1.96
EFG1YGR271C-A RPS16AP0CX51 143 aaKnown RBP2.81□□□□□ -1.96
EFG1YGR271C-A RPS16BP0CX52 143 aaKnown RBP2.81□□□□□ -1.96
EFG1YGR271C-A NHP6BP11633 99 aaKnown RBP2.81□□□□□ -1.96
EFG1YGR271C-A COQ1P18900 473 aa2.81□□□□□ -1.96
EFG1YGR271C-A YSR3P23501 404 aa2.81□□□□□ -1.96
EFG1YGR271C-A CTR86P25355 563 aa2.81□□□□□ -1.96
EFG1YGR271C-A RRT12P25381 491 aa2.81□□□□□ -1.96
EFG1YGR271C-A PBN1P25580 416 aa2.81□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms