RNA–Protein interactions for RNA: YGR166W

TRS65, Transcript of Component of transport protein particle (TRAPP) complex II, yeast

Gene TRS65, Length 1,683 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRS65	YGR166W	TAF10	Q12030	206 aa		0.55	□□□□□ -2.32
TRS65	YGR166W	TIR4	Q12218	487 aa	Predicted RBP	0.55	□□□□□ -2.32
TRS65	YGR166W	YDR262W	Q12331	272 aa		0.55	□□□□□ -2.32
TRS65	YGR166W	GEP5	Q12393	293 aa		0.55	□□□□□ -2.32
TRS65	YGR166W	FOL3	Q12676	427 aa	Predicted RBP	0.55	□□□□□ -2.32
TRS65	YGR166W	BCY1	P07278	416 aa	Known RBP	0.54	□□□□□ -2.32
TRS65	YGR166W	SPS4	P09937	338 aa		0.54	□□□□□ -2.32
TRS65	YGR166W	ZRC1	P20107	442 aa		0.54	□□□□□ -2.32
TRS65	YGR166W	TRX2	P22803	104 aa	Known RBP	0.54	□□□□□ -2.32
TRS65	YGR166W	HXT3	P32466	567 aa	Known RBP	0.54	□□□□□ -2.32
TRS65	YGR166W	DPH5	P32469	300 aa	Predicted RBP	0.54	□□□□□ -2.32
TRS65	YGR166W	SGE1	P33335	543 aa		0.54	□□□□□ -2.32
TRS65	YGR166W	NOP4	P37838	685 aa	Known RBP	0.54	□□□□□ -2.32
TRS65	YGR166W	ECM14	P38836	430 aa		0.54	□□□□□ -2.32
TRS65	YGR166W	UFE1	P41834	346 aa		0.54	□□□□□ -2.32
TRS65	YGR166W	LCB3	P47013	409 aa		0.54	□□□□□ -2.32
TRS65	YGR166W	CPR7	P47103	393 aa		0.54	□□□□□ -2.32
TRS65	YGR166W	TRM9	P49957	279 aa		0.54	□□□□□ -2.32
TRS65	YGR166W	MNP1	P53163	194 aa	Predicted RBP	0.54	□□□□□ -2.32
TRS65	YGR166W	YMR102C	Q03177	834 aa		0.54	□□□□□ -2.32
TRS65	YGR166W	CCE1	Q03702	353 aa		0.54	□□□□□ -2.32
TRS65	YGR166W	MCH1	Q07376	486 aa		0.54	□□□□□ -2.32
TRS65	YGR166W	SIL1	Q08199	421 aa		0.54	□□□□□ -2.32
TRS65	YGR166W	REX4	Q08237	289 aa		0.54	□□□□□ -2.32
TRS65	YGR166W	ATG29	Q12092	213 aa		0.54	□□□□□ -2.32
TRS65	YGR166W	URA2	P07259	2214 aa	Known RBP	0.54	□□□□□ -2.32
TRS65	YGR166W	TPI1	P00942	248 aa	Known RBP	0.53	□□□□□ -2.32
TRS65	YGR166W	GPH1	P06738	902 aa	Known RBP	0.53	□□□□□ -2.32
TRS65	YGR166W	CLN1	P20437	546 aa		0.53	□□□□□ -2.32
TRS65	YGR166W	YCL068C	P25593	260 aa		0.53	□□□□□ -2.32
TRS65	YGR166W	GEX1	P25596	615 aa		0.53	□□□□□ -2.32
TRS65	YGR166W	RPB9	P27999	122 aa		0.53	□□□□□ -2.32
TRS65	YGR166W	SOR1	P35497	357 aa	Known RBP	0.53	□□□□□ -2.32
TRS65	YGR166W	CHL4	P38907	458 aa		0.53	□□□□□ -2.32
TRS65	YGR166W	FAD1	P38913	306 aa		0.53	□□□□□ -2.32
TRS65	YGR166W	COX14	P39103	70 aa		0.53	□□□□□ -2.32
TRS65	YGR166W	FHL1	P39521	936 aa		0.53	□□□□□ -2.32
TRS65	YGR166W	RCY1	P39531	840 aa		0.53	□□□□□ -2.32
TRS65	YGR166W	YAL037W	P39728	267 aa		0.53	□□□□□ -2.32
TRS65	YGR166W	AVT2	P39981	480 aa		0.53	□□□□□ -2.32
TRS65	YGR166W	SPO22	P40511	975 aa		0.53	□□□□□ -2.32
TRS65	YGR166W	HXT14	P42833	540 aa		0.53	□□□□□ -2.32
TRS65	YGR166W	AIM24	P47127	394 aa		0.53	□□□□□ -2.32
TRS65	YGR166W	NBP35	P52920	328 aa		0.53	□□□□□ -2.32
TRS65	YGR166W	COG7	P53195	279 aa		0.53	□□□□□ -2.32
TRS65	YGR166W	RPN14	P53196	417 aa		0.53	□□□□□ -2.32
TRS65	YGR166W	VAC7	P53950	1165 aa		0.53	□□□□□ -2.32
TRS65	YGR166W	KTR6	P54070	446 aa		0.53	□□□□□ -2.32
TRS65	YGR166W	RPL21A	Q02753	160 aa	Known RBP	0.53	□□□□□ -2.32
TRS65	YGR166W	SKI8	Q02793	397 aa	Predicted RBP	0.53	□□□□□ -2.32
TRS65	YGR166W	YPL107W	Q02873	248 aa		0.53	□□□□□ -2.32
TRS65	YGR166W	MDM36	Q06820	579 aa		0.53	□□□□□ -2.32
TRS65	YGR166W	SOR2	Q07786	357 aa		0.53	□□□□□ -2.32
TRS65	YGR166W	YLR030W	Q07967	263 aa		0.53	□□□□□ -2.32
TRS65	YGR166W	HRT1	Q08273	121 aa		0.53	□□□□□ -2.32
TRS65	YGR166W	CLP1	Q08685	445 aa	Predicted RBP	0.53	□□□□□ -2.32
TRS65	YGR166W	AKR2	Q12013	749 aa		0.53	□□□□□ -2.32
TRS65	YGR166W	RPL21B	Q12672	160 aa	Known RBP	0.53	□□□□□ -2.32
TRS65	YGR166W	ARF2	P19146	181 aa	Known RBP	0.53	□□□□□ -2.33
TRS65	YGR166W	SCL1	P21243	252 aa	Known RBP	0.53	□□□□□ -2.33
TRS65	YGR166W	PPH21	P23594	369 aa		0.53	□□□□□ -2.33
TRS65	YGR166W	EXG1	P23776	448 aa	Known RBP	0.53	□□□□□ -2.33
TRS65	YGR166W	RHB1	P25378	209 aa		0.53	□□□□□ -2.33
TRS65	YGR166W	SSH4	P32343	579 aa		0.53	□□□□□ -2.33
TRS65	YGR166W	TKL2	P33315	681 aa		0.53	□□□□□ -2.33
TRS65	YGR166W	MRPL15	P36523	253 aa		0.53	□□□□□ -2.33
TRS65	YGR166W	MRX3	P38172	270 aa		0.53	□□□□□ -2.33
TRS65	YGR166W	GAT2	P40209	560 aa		0.53	□□□□□ -2.33
TRS65	YGR166W	MET18	P40469	1032 aa		0.53	□□□□□ -2.33
TRS65	YGR166W	SHQ1	P40486	507 aa	Predicted RBP	0.53	□□□□□ -2.33
TRS65	YGR166W	HAC1	P41546	238 aa		0.53	□□□□□ -2.33
TRS65	YGR166W	RPS0B	P46654	252 aa	Known RBP	0.53	□□□□□ -2.33
TRS65	YGR166W	CTK3	P46963	296 aa	Predicted RBP	0.53	□□□□□ -2.33
TRS65	YGR166W	YGR067C	P53243	804 aa		0.53	□□□□□ -2.33
TRS65	YGR166W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	0.53	□□□□□ -2.33	not detected
TRS65	YGR166W	GIP3	Q03016	1276 aa		0.53	□□□□□ -2.33
TRS65	YGR166W	VMS1	Q04311	632 aa	Known RBP	0.53	□□□□□ -2.33
TRS65	YGR166W	GRX8	Q05926	109 aa		0.53	□□□□□ -2.33
TRS65	YGR166W	SNT309	Q06091	175 aa	Predicted RBP	0.53	□□□□□ -2.33
TRS65	YGR166W	SHS1	Q07657	551 aa		0.53	□□□□□ -2.33
TRS65	YGR166W	GPM2	Q12008	311 aa		0.53	□□□□□ -2.33
TRS65	YGR166W	TPO4	Q12256	659 aa		0.53	□□□□□ -2.33
TRS65	YGR166W	TPT1	Q12272	230 aa	Known RBP	0.53	□□□□□ -2.33
TRS65	YGR166W	GCN4	P03069	281 aa		0.52	□□□□□ -2.33
TRS65	YGR166W	CAP2	P13517	287 aa		0.52	□□□□□ -2.33
TRS65	YGR166W	MNE1	P24720	663 aa		0.52	□□□□□ -2.33
TRS65	YGR166W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	0.52	□□□□□ -2.33	not detected
TRS65	YGR166W	PDC2	P32896	925 aa		0.52	□□□□□ -2.33
TRS65	YGR166W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	0.52	□□□□□ -2.33	not detected
TRS65	YGR166W	RRP1	P35178	278 aa	Predicted RBP	0.52	□□□□□ -2.33
TRS65	YGR166W	ECM13	P38195	257 aa		0.52	□□□□□ -2.33
TRS65	YGR166W	SHE3	P38272	425 aa	Known RBP	0.52	□□□□□ -2.33
TRS65	YGR166W	APE4	P38821	490 aa		0.52	□□□□□ -2.33
TRS65	YGR166W	YNL208W	P40159	199 aa	Known RBP	0.52	□□□□□ -2.33
TRS65	YGR166W	PRE6	P40303	254 aa	Known RBP	0.52	□□□□□ -2.33
TRS65	YGR166W	ZIM17	P42844	174 aa		0.52	□□□□□ -2.33
TRS65	YGR166W	TOM22	P49334	152 aa		0.52	□□□□□ -2.33
TRS65	YGR166W	RTS3	P53289	263 aa		0.52	□□□□□ -2.33
TRS65	YGR166W	YGR250C	P53316	781 aa	Known RBP	0.52	□□□□□ -2.33
TRS65	YGR166W	JJJ1	P53863	590 aa		0.52	□□□□□ -2.33

Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms