RNA–Protein interactions for RNA: YGR048W

UFD1, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene UFD1, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD1YGR048W PMI40P29952 429 aaKnown RBP7.57□□□□□ -1.2
UFD1YGR048W YKL151CP36059 337 aa7.57□□□□□ -1.2
UFD1YGR048W ALY1P36117 915 aa7.57□□□□□ -1.2
UFD1YGR048W APE3P37302 537 aaKnown RBP7.57□□□□□ -1.2
UFD1YGR048W FLR1P38124 548 aa7.57□□□□□ -1.2
UFD1YGR048W YHR054CP38780 354 aa7.57□□□□□ -1.2
UFD1YGR048W ALP1P38971 573 aa7.57□□□□□ -1.2
UFD1YGR048W DHH1P39517 506 aaKnown RBP7.57□□□□□ -1.2
UFD1YGR048W AIM10P39965 576 aaKnown RBP7.57□□□□□ -1.2
UFD1YGR048W NPP2P39997 493 aa7.57□□□□□ -1.2
UFD1YGR048W FIR1P40020 876 aa7.57□□□□□ -1.2
UFD1YGR048W SLZ1P40167 298 aa7.57□□□□□ -1.2
UFD1YGR048W LOH1P47055 219 aa7.57□□□□□ -1.2
UFD1YGR048W PHB2P50085 310 aa7.57□□□□□ -1.2
UFD1YGR048W COS10P52924 374 aa7.57□□□□□ -1.2
UFD1YGR048W UFD1P53044 361 aa7.57□□□□□ -1.2
UFD1YGR048W GPG1P53130 126 aa7.57□□□□□ -1.2
UFD1YGR048W TAM41P53230 385 aa7.57□□□□□ -1.2
UFD1YGR048W PLB2Q03674 706 aa7.57□□□□□ -1.2
UFD1YGR048W RKM2Q03942 479 aa7.57□□□□□ -1.2
UFD1YGR048W HBT1Q07653 1046 aaKnown RBP7.57□□□□□ -1.2
UFD1YGR048W MRN1Q08925 612 aaKnown RBP RIP-Chip data7.57□□□□□ -1.2not detected
UFD1YGR048W RAD28Q12021 506 aa7.57□□□□□ -1.2
UFD1YGR048W JLP1Q12358 412 aa7.57□□□□□ -1.2
UFD1YGR048W GIS3Q12418 502 aa7.57□□□□□ -1.2
UFD1YGR048W CTF3Q12748 733 aa7.57□□□□□ -1.2
UFD1YGR048W SRN2Q99176 213 aa7.57□□□□□ -1.2
UFD1YGR048W YEL009C-AA0A023PZF2 135 aa7.56□□□□□ -1.2
UFD1YGR048W AI1P03875 834 aa7.56□□□□□ -1.2
UFD1YGR048W CBP1P07252 654 aa7.56□□□□□ -1.2
UFD1YGR048W RPB3P16370 318 aaKnown RBP7.56□□□□□ -1.2
UFD1YGR048W PRE9P23638 258 aaKnown RBP7.56□□□□□ -1.2
UFD1YGR048W COX13P32799 129 aa7.56□□□□□ -1.2
UFD1YGR048W GSP1P32835 219 aaKnown RBP7.56□□□□□ -1.2
UFD1YGR048W GSP2P32836 220 aaKnown RBP7.56□□□□□ -1.2
UFD1YGR048W LIP5P32875 414 aa7.56□□□□□ -1.2
UFD1YGR048W MRP4P32902 394 aa7.56□□□□□ -1.2
UFD1YGR048W YBR063CP38083 404 aa7.56□□□□□ -1.2
UFD1YGR048W DTR1P38125 572 aa7.56□□□□□ -1.2
UFD1YGR048W YHR033WP38690 423 aa7.56□□□□□ -1.2
UFD1YGR048W RFC4P40339 323 aaKnown RBP7.56□□□□□ -1.2
UFD1YGR048W BMT5P40493 336 aa7.56□□□□□ -1.2
UFD1YGR048W ARF3P40994 183 aaRIP-Chip data7.56□□□□□ -1.2not detected
UFD1YGR048W GAT1P43574 510 aa7.56□□□□□ -1.2
UFD1YGR048W IRC7P43623 340 aa7.56□□□□□ -1.2
UFD1YGR048W SNG1P46950 547 aa7.56□□□□□ -1.2
UFD1YGR048W NIT2P47016 307 aa7.56□□□□□ -1.2
UFD1YGR048W TAX4P47030 604 aa7.56□□□□□ -1.2
UFD1YGR048W TIM13P53299 105 aa7.56□□□□□ -1.2
UFD1YGR048W MTQ1P53944 314 aa7.56□□□□□ -1.2
UFD1YGR048W CUE4Q04201 117 aaPredicted RBP7.56□□□□□ -1.2
UFD1YGR048W SEN15Q04675 128 aa7.56□□□□□ -1.2
UFD1YGR048W DCR2Q05924 578 aa7.56□□□□□ -1.2
UFD1YGR048W MRPL35Q06678 367 aa7.56□□□□□ -1.2
UFD1YGR048W AIM39Q08223 395 aa7.56□□□□□ -1.2
UFD1YGR048W MCA1Q08601 432 aa7.56□□□□□ -1.2
UFD1YGR048W MDY2Q12285 212 aa7.56□□□□□ -1.2
UFD1YGR048W RGT2Q12300 763 aa7.56□□□□□ -1.2
UFD1YGR048W EAF3Q12432 401 aa7.56□□□□□ -1.2
UFD1YGR048W MHT1Q12525 324 aa7.56□□□□□ -1.2
UFD1YGR048W BNI1P41832 1953 aa7.56□□□□□ -1.2
UFD1YGR048W CAF20P12962 161 aaKnown RBP7.55□□□□□ -1.2
UFD1YGR048W URA6P15700 204 aa7.55□□□□□ -1.2
UFD1YGR048W SEC59P20048 519 aa7.55□□□□□ -1.2
UFD1YGR048W PRP2P20095 876 aaPredicted RBP7.55□□□□□ -1.2
UFD1YGR048W PER1P25625 357 aa7.55□□□□□ -1.2
UFD1YGR048W NRP1P32770 719 aaKnown RBP RIP-Chip data7.55□□□□□ -1.2not detected
UFD1YGR048W SUR1P33300 382 aa7.55□□□□□ -1.2
UFD1YGR048W SCD5P34758 872 aa7.55□□□□□ -1.2
UFD1YGR048W TMA19P35691 167 aaKnown RBP7.55□□□□□ -1.2
UFD1YGR048W SDH4P37298 181 aa7.55□□□□□ -1.2
UFD1YGR048W SHG1P38337 142 aa7.55□□□□□ -1.2
UFD1YGR048W SSH1P38353 490 aaKnown RBP7.55□□□□□ -1.2
UFD1YGR048W MDM31P38880 579 aa7.55□□□□□ -1.2
UFD1YGR048W RAD55P38953 406 aa7.55□□□□□ -1.2
UFD1YGR048W GDI1P39958 451 aaKnown RBP7.55□□□□□ -1.2
UFD1YGR048W HMS2P47175 358 aa7.55□□□□□ -1.2
UFD1YGR048W DAN1P47178 298 aa7.55□□□□□ -1.2
UFD1YGR048W YLR446WQ06204 433 aa7.55□□□□□ -1.2
UFD1YGR048W SUE1Q06524 206 aa7.55□□□□□ -1.2
UFD1YGR048W SDO1Q07953 250 aaKnown RBP7.55□□□□□ -1.2
UFD1YGR048W NRT1Q08485 598 aa7.55□□□□□ -1.2
UFD1YGR048W NUS1Q12063 375 aa7.55□□□□□ -1.2
UFD1YGR048W PCD1Q12524 340 aa7.55□□□□□ -1.2
UFD1YGR048W TMA7Q3E764 64 aaKnown RBP7.55□□□□□ -1.2
UFD1YGR048W COA6Q3E846 104 aa7.55□□□□□ -1.2
UFD1YGR048W MEX67Q99257 599 aaKnown RBP7.55□□□□□ -1.2
UFD1YGR048W IZH4Q99393 312 aa7.55□□□□□ -1.2
UFD1YGR048W ATP4P05626 244 aa7.54□□□□□ -1.2
UFD1YGR048W CDC34P14682 295 aa7.54□□□□□ -1.2
UFD1YGR048W CKA1P15790 372 aa7.54□□□□□ -1.2
UFD1YGR048W ZRC1P20107 442 aa7.54□□□□□ -1.2
UFD1YGR048W EPT1P22140 391 aa7.54□□□□□ -1.2
UFD1YGR048W GAC1P28006 793 aa7.54□□□□□ -1.2
UFD1YGR048W SPS19P32573 292 aaKnown RBP7.54□□□□□ -1.2
UFD1YGR048W BET3P36149 193 aa7.54□□□□□ -1.2
UFD1YGR048W GCV3P39726 170 aaPredicted RBP7.54□□□□□ -1.2
UFD1YGR048W RRG9P40156 214 aa7.54□□□□□ -1.2
UFD1YGR048W MPM1P40364 252 aa7.54□□□□□ -1.2
UFD1YGR048W PKP1P40530 394 aa7.54□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 29.8 ms