RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W COG3P40094 801 aa6.17□□□□□ -1.42
NUP49YGL172W YIL067CP40514 678 aa6.17□□□□□ -1.42
NUP49YGL172W YRB2P40517 327 aa6.17□□□□□ -1.42
NUP49YGL172W VMA10P48836 114 aaKnown RBP6.17□□□□□ -1.42
NUP49YGL172W IMD4P50094 524 aaKnown RBP6.17□□□□□ -1.42
NUP49YGL172W VPS73P53142 486 aaKnown RBP6.17□□□□□ -1.42
NUP49YGL172W LSG1P53145 640 aaKnown RBP6.17□□□□□ -1.42
NUP49YGL172W YGR168CP53293 376 aa6.17□□□□□ -1.42
NUP49YGL172W YLR446WQ06204 433 aa6.17□□□□□ -1.42
NUP49YGL172W YPS7Q06325 596 aa6.17□□□□□ -1.42
NUP49YGL172W BRX1Q08235 291 aaKnown RBP6.17□□□□□ -1.42
NUP49YGL172W SKI7Q08491 747 aaPredicted RBP6.17□□□□□ -1.42
NUP49YGL172W NFI1Q12216 726 aa6.17□□□□□ -1.42
NUP49YGL172W RPC40P07703 335 aaKnown RBP6.16□□□□□ -1.42
NUP49YGL172W CWH43P25618 953 aa6.16□□□□□ -1.42
NUP49YGL172W ITR2P30606 609 aa6.16□□□□□ -1.42
NUP49YGL172W HIR2P32480 875 aa6.16□□□□□ -1.42
NUP49YGL172W ARC19P33204 171 aaKnown RBP6.16□□□□□ -1.42
NUP49YGL172W YKL077WP36081 392 aa6.16□□□□□ -1.42
NUP49YGL172W MCM7P38132 845 aa6.16□□□□□ -1.42
NUP49YGL172W GRE3P38715 327 aaKnown RBP RIP-Chip data6.16□□□□□ -1.42not detected
NUP49YGL172W HRB1P38922 454 aaKnown RBP RIP-Chip data6.16□□□□□ -1.42not detected
NUP49YGL172W SPO73P40031 143 aa6.16□□□□□ -1.42
NUP49YGL172W YNL208WP40159 199 aaKnown RBP6.16□□□□□ -1.42
NUP49YGL172W GCN20P43535 752 aaKnown RBP6.16□□□□□ -1.42
NUP49YGL172W EMC2P47133 292 aaKnown RBP6.16□□□□□ -1.42
NUP49YGL172W SHE4P51534 789 aa6.16□□□□□ -1.42
NUP49YGL172W DAM1P53267 343 aa6.16□□□□□ -1.42
NUP49YGL172W CUZ1P53899 274 aa6.16□□□□□ -1.42
NUP49YGL172W SUR7P54003 302 aa6.16□□□□□ -1.42
NUP49YGL172W YKR011CQ02209 353 aa6.16□□□□□ -1.42
NUP49YGL172W YDR209CQ03480 137 aa6.16□□□□□ -1.42
NUP49YGL172W CGI121Q03705 181 aaKnown RBP6.16□□□□□ -1.42
NUP49YGL172W HED1Q03937 162 aa6.16□□□□□ -1.42
NUP49YGL172W ERB1Q04660 807 aaKnown RBP6.16□□□□□ -1.42
NUP49YGL172W FMP40Q08968 688 aaPredicted RBP6.16□□□□□ -1.42
NUP49YGL172W MDM32Q12171 622 aa6.16□□□□□ -1.42
NUP49YGL172W YRM1Q12340 786 aa6.16□□□□□ -1.42
NUP49YGL172W ERD2P18414 219 aa6.16□□□□□ -1.42
NUP49YGL172W RRP7P25368 297 aaPredicted RBP6.16□□□□□ -1.42
NUP49YGL172W RHB1P25378 209 aa6.16□□□□□ -1.42
NUP49YGL172W PTP2P29461 750 aa6.16□□□□□ -1.42
NUP49YGL172W ASF2P32448 525 aaPredicted RBP6.16□□□□□ -1.42
NUP49YGL172W MTC2P34246 357 aa6.16□□□□□ -1.42
NUP49YGL172W AMN1P38285 549 aaPredicted RBP6.16□□□□□ -1.42
NUP49YGL172W CTF8P38877 133 aa6.16□□□□□ -1.42
NUP49YGL172W YJL193WP39542 402 aa6.16□□□□□ -1.42
NUP49YGL172W IES5P40060 125 aa6.16□□□□□ -1.42
NUP49YGL172W PHB1P40961 287 aa6.16□□□□□ -1.42
NUP49YGL172W BNA3P47039 444 aaKnown RBP6.16□□□□□ -1.42
NUP49YGL172W YGL260WP53056 76 aa6.16□□□□□ -1.42
NUP49YGL172W YNR040WP53736 256 aa6.16□□□□□ -1.42
NUP49YGL172W DCR2Q05924 578 aa6.16□□□□□ -1.42
NUP49YGL172W CRT10Q08226 957 aa6.16□□□□□ -1.42
NUP49YGL172W RIB3Q99258 208 aa6.16□□□□□ -1.42
NUP49YGL172W GCN1P33892 2672 aaKnown RBP6.15□□□□□ -1.42
NUP49YGL172W YCR100CP25606 316 aa6.15□□□□□ -1.43
NUP49YGL172W CYS4P32582 507 aaKnown RBP6.15□□□□□ -1.43
NUP49YGL172W DHR2P36009 735 aaPredicted RBP6.15□□□□□ -1.43
NUP49YGL172W BAP2P38084 609 aa6.15□□□□□ -1.43
NUP49YGL172W SRO77P38163 1010 aa6.15□□□□□ -1.43
NUP49YGL172W TDA11P38854 504 aa6.15□□□□□ -1.43
NUP49YGL172W PRE6P40303 254 aaKnown RBP6.15□□□□□ -1.43
NUP49YGL172W SOK1P40317 901 aa6.15□□□□□ -1.43
NUP49YGL172W SEC24P40482 926 aaKnown RBP6.15□□□□□ -1.43
NUP49YGL172W GPP1P41277 250 aaKnown RBP6.15□□□□□ -1.43
NUP49YGL172W YFR054CP43622 192 aa6.15□□□□□ -1.43
NUP49YGL172W BAT2P47176 376 aaKnown RBP6.15□□□□□ -1.43
NUP49YGL172W BUD9P53226 547 aa6.15□□□□□ -1.43
NUP49YGL172W EKI1Q03764 534 aa6.15□□□□□ -1.43
NUP49YGL172W TY1A-DR3Q12441 440 aa6.15□□□□□ -1.43
NUP49YGL172W YOR032W-AQ8TGS1 66 aa6.15□□□□□ -1.43
NUP49YGL172W YBR056W-AI2HB52 66 aa6.14□□□□□ -1.43
NUP49YGL172W CDC9P04819 755 aa6.14□□□□□ -1.43
NUP49YGL172W RPL7AP05737 244 aaKnown RBP6.14□□□□□ -1.43
NUP49YGL172W ERD1P16151 362 aa6.14□□□□□ -1.43
NUP49YGL172W BUD5P25300 642 aaPredicted RBP6.14□□□□□ -1.43
NUP49YGL172W RAD51P25454 400 aa6.14□□□□□ -1.43
NUP49YGL172W MDL1P33310 695 aa6.14□□□□□ -1.43
NUP49YGL172W MTC4P38335 694 aaKnown RBP6.14□□□□□ -1.43
NUP49YGL172W SIC1P38634 284 aa6.14□□□□□ -1.43
NUP49YGL172W YEL068CP39977 110 aa6.14□□□□□ -1.43
NUP49YGL172W AIR1P40507 360 aaKnown RBP6.14□□□□□ -1.43
NUP49YGL172W PKP1P40530 394 aa6.14□□□□□ -1.43
NUP49YGL172W RPE1P46969 238 aa6.14□□□□□ -1.43
NUP49YGL172W HMS2P47175 358 aa6.14□□□□□ -1.43
NUP49YGL172W RHO5P53879 331 aaKnown RBP6.14□□□□□ -1.43
NUP49YGL172W YMR099CQ03161 297 aaKnown RBP6.14□□□□□ -1.43
NUP49YGL172W PFA5Q03289 374 aa6.14□□□□□ -1.43
NUP49YGL172W GIS1Q03833 894 aa6.14□□□□□ -1.43
NUP49YGL172W MIX14Q04341 121 aa6.14□□□□□ -1.43
NUP49YGL172W NOP12Q08208 459 aaKnown RBP6.14□□□□□ -1.43
NUP49YGL172W RRG7Q08774 242 aaPredicted RBP6.14□□□□□ -1.43
NUP49YGL172W RPL7BQ12213 244 aaKnown RBP6.14□□□□□ -1.43
NUP49YGL172W DET1Q99288 334 aaKnown RBP6.14□□□□□ -1.43
NUP49YGL172W ERG8P24521 451 aa6.13□□□□□ -1.43
NUP49YGL172W TPO5P36029 618 aa6.13□□□□□ -1.43
NUP49YGL172W ECM8P38246 354 aa6.13□□□□□ -1.43
NUP49YGL172W PEX18P38855 283 aa6.13□□□□□ -1.43
NUP49YGL172W ECO1P43605 281 aa6.13□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 46.5 ms