RNA–Protein interactions for RNA: YGL155W

CDC43, Transcript of Beta subunit of geranylgeranyltransferase type I, yeastyeast

Gene CDC43, Length 1,131 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC43YGL155W RSF1Q05043 376 aa5.03□□□□□ -1.6
CDC43YGL155W BOP2Q06150 570 aa5.03□□□□□ -1.6
CDC43YGL155W EAF1Q06337 982 aa5.03□□□□□ -1.6
CDC43YGL155W RAX1Q08760 435 aa5.03□□□□□ -1.6
CDC43YGL155W YOR283WQ12040 230 aaKnown RBP5.03□□□□□ -1.6
CDC43YGL155W PDH1Q12428 516 aaKnown RBP5.03□□□□□ -1.6
CDC43YGL155W YPR064WQ12492 139 aa5.03□□□□□ -1.6
CDC43YGL155W YDL007C-AQ2V2Q0 85 aa5.03□□□□□ -1.6
CDC43YGL155W YKL033W-AQ86ZR7 236 aa5.03□□□□□ -1.6
CDC43YGL155W MTR10Q99189 972 aa5.03□□□□□ -1.6
CDC43YGL155W MSB2P32334 1306 aa5.02□□□□□ -1.61
CDC43YGL155W QCR7P00128 127 aa5.02□□□□□ -1.61
CDC43YGL155W FLP1P03870 423 aa5.02□□□□□ -1.61
CDC43YGL155W SPS2P08459 502 aa5.02□□□□□ -1.61
CDC43YGL155W SPT15P13393 240 aaKnown RBP5.02□□□□□ -1.61
CDC43YGL155W CMP2P14747 604 aa5.02□□□□□ -1.61
CDC43YGL155W PHO80P20052 293 aa5.02□□□□□ -1.61
CDC43YGL155W FPR1P20081 114 aaKnown RBP5.02□□□□□ -1.61
CDC43YGL155W PRE7P23724 241 aaKnown RBP5.02□□□□□ -1.61
CDC43YGL155W URK1P27515 501 aa5.02□□□□□ -1.61
CDC43YGL155W DOA1P36037 715 aa5.02□□□□□ -1.61
CDC43YGL155W TUL1P36096 758 aa5.02□□□□□ -1.61
CDC43YGL155W MRPL3P36516 390 aa5.02□□□□□ -1.61
CDC43YGL155W NAT2P37293 288 aa5.02□□□□□ -1.61
CDC43YGL155W TAT1P38085 619 aa5.02□□□□□ -1.61
CDC43YGL155W BNA4P38169 460 aa5.02□□□□□ -1.61
CDC43YGL155W NEM1P38757 446 aa5.02□□□□□ -1.61
CDC43YGL155W HPA3P39979 161 aa5.02□□□□□ -1.61
CDC43YGL155W HXT9P40885 567 aa5.02□□□□□ -1.61
CDC43YGL155W RPS12P48589 143 aaKnown RBP5.02□□□□□ -1.61
CDC43YGL155W MEP3P53390 489 aa5.02□□□□□ -1.61
CDC43YGL155W YKR011CQ02209 353 aa5.02□□□□□ -1.61
CDC43YGL155W MRPS16Q02608 121 aa5.02□□□□□ -1.61
CDC43YGL155W MSC1Q03104 513 aa5.02□□□□□ -1.61
CDC43YGL155W SPC19Q03954 165 aa5.02□□□□□ -1.61
CDC43YGL155W RPC11Q04307 110 aaPredicted RBP5.02□□□□□ -1.61
CDC43YGL155W PLM2Q04383 521 aa5.02□□□□□ -1.61
CDC43YGL155W ELP6Q04868 273 aa5.02□□□□□ -1.61
CDC43YGL155W YMR315WQ04869 349 aaKnown RBP5.02□□□□□ -1.61
CDC43YGL155W YLR283WQ05867 314 aa5.02□□□□□ -1.61
CDC43YGL155W FRE5Q08908 694 aa5.02□□□□□ -1.61
CDC43YGL155W FDH1Q08911 376 aa5.02□□□□□ -1.61
CDC43YGL155W YOR114WQ12219 294 aa5.02□□□□□ -1.61
CDC43YGL155W TPO4Q12256 659 aa5.02□□□□□ -1.61
CDC43YGL155W YOL114CQ12322 202 aa5.02□□□□□ -1.61
CDC43YGL155W TY1A-NL1Q12391 440 aaKnown RBP5.02□□□□□ -1.61
CDC43YGL155W ATG31Q12421 196 aa5.02□□□□□ -1.61
CDC43YGL155W APC2Q12440 853 aa5.02□□□□□ -1.61
CDC43YGL155W SKS1Q12505 502 aa5.02□□□□□ -1.61
CDC43YGL155W PNO1Q99216 274 aaKnown RBP5.02□□□□□ -1.61
CDC43YGL155W DPM1P14020 267 aaKnown RBP5.01□□□□□ -1.61
CDC43YGL155W MCK1P21965 375 aaKnown RBP5.01□□□□□ -1.61
CDC43YGL155W ITR1P30605 584 aa5.01□□□□□ -1.61
CDC43YGL155W RNP1P32385 249 aa5.01□□□□□ -1.61
CDC43YGL155W ERG1P32476 496 aaKnown RBP5.01□□□□□ -1.61
CDC43YGL155W PUB1P32588 453 aaKnown RBP RIP-Chip data5.01□□□□□ -1.61not detected
CDC43YGL155W RPC34P32910 317 aa5.01□□□□□ -1.61
CDC43YGL155W TMA19P35691 167 aaKnown RBP5.01□□□□□ -1.61
CDC43YGL155W OAR1P35731 278 aa5.01□□□□□ -1.61
CDC43YGL155W SRO77P38163 1010 aa5.01□□□□□ -1.61
CDC43YGL155W TAE1P38340 232 aa5.01□□□□□ -1.61
CDC43YGL155W DED81P38707 554 aaKnown RBP5.01□□□□□ -1.61
CDC43YGL155W CHL4P38907 458 aa5.01□□□□□ -1.61
CDC43YGL155W MBP1P39678 833 aa5.01□□□□□ -1.61
CDC43YGL155W PHM8P40025 321 aa5.01□□□□□ -1.61
CDC43YGL155W SWM2P40342 146 aa5.01□□□□□ -1.61
CDC43YGL155W MDE1P47095 244 aa5.01□□□□□ -1.61
CDC43YGL155W AAD10P47182 288 aa5.01□□□□□ -1.61
CDC43YGL155W BPL1P48445 690 aaPredicted RBP5.01□□□□□ -1.61
CDC43YGL155W VPS73P53142 486 aaKnown RBP5.01□□□□□ -1.61
CDC43YGL155W SGF73P53165 657 aa5.01□□□□□ -1.61
CDC43YGL155W IMO32P53219 342 aa5.01□□□□□ -1.61
CDC43YGL155W ERV29P53337 310 aa5.01□□□□□ -1.61
CDC43YGL155W CSL4P53859 292 aaPredicted RBP5.01□□□□□ -1.61
CDC43YGL155W RHO4Q00246 291 aa5.01□□□□□ -1.61
CDC43YGL155W NGL2Q03264 515 aaKnown RBP5.01□□□□□ -1.61
CDC43YGL155W ROT1Q03691 256 aa5.01□□□□□ -1.61
CDC43YGL155W OST6Q03723 332 aa5.01□□□□□ -1.61
CDC43YGL155W YMR130WQ04223 302 aa5.01□□□□□ -1.61
CDC43YGL155W TPO3Q06451 622 aa5.01□□□□□ -1.61
CDC43YGL155W YEH1Q07804 573 aa5.01□□□□□ -1.61
CDC43YGL155W RRP40Q08285 240 aaKnown RBP5.01□□□□□ -1.61
CDC43YGL155W YOR214CQ12282 236 aa5.01□□□□□ -1.61
CDC43YGL155W GCN4P03069 281 aa5□□□□□ -1.61
CDC43YGL155W RAD52P06778 471 aaKnown RBP5□□□□□ -1.61
CDC43YGL155W YOL162WP0CF19 215 aa5□□□□□ -1.61
CDC43YGL155W STE12P13574 688 aa5□□□□□ -1.61
CDC43YGL155W NCP1P16603 691 aaKnown RBP5□□□□□ -1.61
CDC43YGL155W RPB5P20434 215 aa5□□□□□ -1.61
CDC43YGL155W EXG1P23776 448 aaKnown RBP5□□□□□ -1.61
CDC43YGL155W SNC1P31109 117 aa5□□□□□ -1.61
CDC43YGL155W FUN26P31381 517 aa5□□□□□ -1.61
CDC43YGL155W ORC2P32833 620 aa5□□□□□ -1.61
CDC43YGL155W PDR3P33200 976 aa5□□□□□ -1.61
CDC43YGL155W ARC19P33204 171 aaKnown RBP5□□□□□ -1.61
CDC43YGL155W SFC1P33303 322 aa5□□□□□ -1.61
CDC43YGL155W SKN1P33336 771 aa5□□□□□ -1.61
CDC43YGL155W MAC1P35192 417 aa5□□□□□ -1.61
CDC43YGL155W SDS22P36047 338 aa5□□□□□ -1.61
CDC43YGL155W SNU114P36048 1008 aaKnown RBP5□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms