RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeastyeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB4YFL002C ATG38Q05789 226 aaKnown RBP3.6□□□□□ -1.83
SPB4YFL002C YPQ1Q12010 308 aa3.6□□□□□ -1.83
SPB4YFL002C RPL20AP0CX23 172 aaKnown RBP3.6□□□□□ -1.83
SPB4YFL002C RPL20BP0CX24 172 aaPredicted RBP3.6□□□□□ -1.83
SPB4YFL002C RNA14P25298 677 aaKnown RBP3.6□□□□□ -1.83
SPB4YFL002C PRO3P32263 286 aaKnown RBP3.6□□□□□ -1.83
SPB4YFL002C PEX2P32800 271 aa3.6□□□□□ -1.83
SPB4YFL002C BMH2P34730 273 aaKnown RBP3.6□□□□□ -1.83
SPB4YFL002C SKI2P35207 1287 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
SPB4YFL002C NAT2P37293 288 aa3.6□□□□□ -1.83
SPB4YFL002C MTC6P38849 526 aa3.6□□□□□ -1.83
SPB4YFL002C COX14P39103 70 aa3.6□□□□□ -1.83
SPB4YFL002C PCI8P40512 444 aa3.6□□□□□ -1.83
SPB4YFL002C YFL040WP43562 540 aa3.6□□□□□ -1.83
SPB4YFL002C SED5Q01590 340 aa3.6□□□□□ -1.83
SPB4YFL002C IRC4Q03036 179 aa3.6□□□□□ -1.83
SPB4YFL002C FMP42Q04991 504 aa3.6□□□□□ -1.83
SPB4YFL002C THI7Q05998 598 aa3.6□□□□□ -1.83
SPB4YFL002C ERP3Q12403 225 aa3.6□□□□□ -1.83
SPB4YFL002C QCR6P00127 147 aa3.59□□□□□ -1.83
SPB4YFL002C ATP6P00854 259 aa3.59□□□□□ -1.83
SPB4YFL002C PRB1P09232 635 aa3.59□□□□□ -1.83
SPB4YFL002C YCR016WP25617 290 aaKnown RBP3.59□□□□□ -1.83
SPB4YFL002C RAD5P32849 1169 aaPredicted RBP3.59□□□□□ -1.83
SPB4YFL002C DTR1P38125 572 aa3.59□□□□□ -1.83
SPB4YFL002C YBP1P38315 674 aa3.59□□□□□ -1.83
SPB4YFL002C SMF2P38778 549 aa3.59□□□□□ -1.83
SPB4YFL002C RPR2P40571 144 aa3.59□□□□□ -1.83
SPB4YFL002C TES1P41903 349 aaKnown RBP3.59□□□□□ -1.83
SPB4YFL002C CGR1P53188 120 aa3.59□□□□□ -1.83
SPB4YFL002C GOR1P53839 350 aa3.59□□□□□ -1.83
SPB4YFL002C PGA2P53903 129 aa3.59□□□□□ -1.83
SPB4YFL002C YMR209CQ03648 457 aa3.59□□□□□ -1.83
SPB4YFL002C LOT6Q07923 191 aa3.59□□□□□ -1.83
SPB4YFL002C THP3Q12049 470 aaKnown RBP3.59□□□□□ -1.83
SPB4YFL002C APC9Q12107 265 aa3.59□□□□□ -1.83
SPB4YFL002C YCR024C-BQ3E7Z8 88 aa3.59□□□□□ -1.83
SPB4YFL002C CFT1Q06632 1357 aaKnown RBP3.59□□□□□ -1.83
SPB4YFL002C ADH2P00331 348 aaKnown RBP3.58□□□□□ -1.84
SPB4YFL002C RPL15AP05748 204 aaKnown RBP3.58□□□□□ -1.84
SPB4YFL002C ARG80P07249 177 aa3.58□□□□□ -1.84
SPB4YFL002C ATS1P31386 333 aa3.58□□□□□ -1.84
SPB4YFL002C ZRT1P32804 376 aa3.58□□□□□ -1.84
SPB4YFL002C CYM1P32898 989 aa3.58□□□□□ -1.84
SPB4YFL002C CBF5P33322 483 aaKnown RBP RIP-Chip data3.58□□□□□ -1.84not detected
SPB4YFL002C ARC40P38328 384 aaKnown RBP3.58□□□□□ -1.84
SPB4YFL002C YHR035WP38769 630 aa3.58□□□□□ -1.84
SPB4YFL002C AIM10P39965 576 aaKnown RBP3.58□□□□□ -1.84
SPB4YFL002C YIL169CP40442 995 aa3.58□□□□□ -1.84
SPB4YFL002C OTU1P43558 301 aa3.58□□□□□ -1.84
SPB4YFL002C CTK3P46963 296 aaPredicted RBP3.58□□□□□ -1.84
SPB4YFL002C LSG1P53145 640 aaKnown RBP3.58□□□□□ -1.84
SPB4YFL002C YLR283WQ05867 314 aa3.58□□□□□ -1.84
SPB4YFL002C CMS1Q07897 291 aaKnown RBP3.58□□□□□ -1.84
SPB4YFL002C PIS1P06197 220 aaKnown RBP3.58□□□□□ -1.84
SPB4YFL002C HPR1P17629 752 aaKnown RBP3.58□□□□□ -1.84
SPB4YFL002C DAL82P21705 255 aa3.58□□□□□ -1.84
SPB4YFL002C RRT12P25381 491 aa3.58□□□□□ -1.84
SPB4YFL002C KRE6P32486 720 aa3.58□□□□□ -1.84
SPB4YFL002C KAR9P32526 644 aa3.58□□□□□ -1.84
SPB4YFL002C ASK1P35734 292 aa3.58□□□□□ -1.84
SPB4YFL002C ALD5P40047 520 aaKnown RBP3.58□□□□□ -1.84
SPB4YFL002C MRM2P53123 320 aa3.58□□□□□ -1.84
SPB4YFL002C YPL077CQ02831 240 aa3.58□□□□□ -1.84
SPB4YFL002C PRM6Q04705 352 aa3.58□□□□□ -1.84
SPB4YFL002C YOR029WQ12243 111 aa3.58□□□□□ -1.84
SPB4YFL002C PRR1P28708 518 aa3.57□□□□□ -1.84
SPB4YFL002C ZIP1P31111 875 aa3.57□□□□□ -1.84
SPB4YFL002C PRS4P38063 326 aaPredicted RBP3.57□□□□□ -1.84
SPB4YFL002C AVT5P38176 459 aa3.57□□□□□ -1.84
SPB4YFL002C TDA11P38854 504 aa3.57□□□□□ -1.84
SPB4YFL002C RPH1P39956 796 aa3.57□□□□□ -1.84
SPB4YFL002C YND1P40009 630 aa3.57□□□□□ -1.84
SPB4YFL002C YGR210CP42942 411 aa3.57□□□□□ -1.84
SPB4YFL002C ALG11P53954 548 aaKnown RBP3.57□□□□□ -1.84
SPB4YFL002C PAM18Q07914 168 aa3.57□□□□□ -1.84
SPB4YFL002C PCL9Q12477 304 aa3.57□□□□□ -1.84
SPB4YFL002C HEM15P16622 393 aa3.56□□□□□ -1.84
SPB4YFL002C SEC1P30619 724 aaKnown RBP3.56□□□□□ -1.84
SPB4YFL002C MEI5P32489 222 aa3.56□□□□□ -1.84
SPB4YFL002C SRB4P32569 687 aa3.56□□□□□ -1.84
SPB4YFL002C YKL071WP36086 256 aa3.56□□□□□ -1.84
SPB4YFL002C BIG1P38813 335 aa3.56□□□□□ -1.84
SPB4YFL002C MET30P39014 640 aa3.56□□□□□ -1.84
SPB4YFL002C COA1P40452 197 aa3.56□□□□□ -1.84
SPB4YFL002C YIL029CP40538 142 aa3.56□□□□□ -1.84
SPB4YFL002C ADH6Q04894 360 aaKnown RBP3.56□□□□□ -1.84
SPB4YFL002C YPR172WQ06608 200 aa3.56□□□□□ -1.84
SPB4YFL002C ASR1Q06834 288 aa3.56□□□□□ -1.84
SPB4YFL002C SDO1Q07953 250 aaKnown RBP3.56□□□□□ -1.84
SPB4YFL002C SAL1D6W196 494 aa3.56□□□□□ -1.84
SPB4YFL002C JIP3O13555 125 aa3.56□□□□□ -1.84
SPB4YFL002C TDH2P00358 332 aaKnown RBP3.56□□□□□ -1.84
SPB4YFL002C MET16P18408 261 aaPredicted RBP3.56□□□□□ -1.84
SPB4YFL002C VPS1P21576 704 aaKnown RBP3.56□□□□□ -1.84
SPB4YFL002C MRPL25P23369 157 aa3.56□□□□□ -1.84
SPB4YFL002C PTP1P25044 335 aa3.56□□□□□ -1.84
SPB4YFL002C AGA1P32323 725 aa3.56□□□□□ -1.84
SPB4YFL002C ATO2P32907 282 aa3.56□□□□□ -1.84
SPB4YFL002C YKL063CP35725 167 aa3.56□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms