RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DEG1	YFL001W	RAD23	P32628	398 aa	Known RBP	4.25	□□□□□ -1.73
DEG1	YFL001W	RPC25	P35718	212 aa		4.25	□□□□□ -1.73
DEG1	YFL001W	MYO3	P36006	1272 aa		4.25	□□□□□ -1.73
DEG1	YFL001W	SBE22	P38814	852 aa		4.25	□□□□□ -1.73
DEG1	YFL001W	MDM31	P38880	579 aa		4.25	□□□□□ -1.73
DEG1	YFL001W	SMC2	P38989	1170 aa	Known RBP	4.25	□□□□□ -1.73
DEG1	YFL001W	FET3	P38993	636 aa		4.25	□□□□□ -1.73
DEG1	YFL001W	COX14	P39103	70 aa		4.25	□□□□□ -1.73
DEG1	YFL001W	INA22	P40576	216 aa		4.25	□□□□□ -1.73
DEG1	YFL001W	YJL213W	P40896	331 aa		4.25	□□□□□ -1.73
DEG1	YFL001W	MSO1	P53604	210 aa	Known RBP	4.25	□□□□□ -1.73
DEG1	YFL001W	TIM11	P81449	96 aa	Predicted RBP	4.25	□□□□□ -1.73
DEG1	YFL001W	RRT8	Q08219	342 aa		4.25	□□□□□ -1.73
DEG1	YFL001W	DNL4	Q08387	944 aa	Predicted RBP	4.25	□□□□□ -1.73
DEG1	YFL001W	MEX67	Q99257	599 aa	Known RBP	4.25	□□□□□ -1.73
DEG1	YFL001W	YLR419W	Q06698	1435 aa	Known RBP	4.24	□□□□□ -1.73
DEG1	YFL001W	GDH1	P07262	454 aa	Known RBP	4.24	□□□□□ -1.73
DEG1	YFL001W	VMA5	P31412	392 aa	Known RBP	4.24	□□□□□ -1.73
DEG1	YFL001W	HXT1	P32465	570 aa		4.24	□□□□□ -1.73
DEG1	YFL001W	YHR182W	P38870	785 aa		4.24	□□□□□ -1.73
DEG1	YFL001W	RBG1	P39729	369 aa		4.24	□□□□□ -1.73
DEG1	YFL001W	KEG1	P43614	200 aa		4.24	□□□□□ -1.73
DEG1	YFL001W	TAF6	P53040	516 aa		4.24	□□□□□ -1.73
DEG1	YFL001W	SHE10	P53075	577 aa		4.24	□□□□□ -1.73
DEG1	YFL001W	YGR168C	P53293	376 aa		4.24	□□□□□ -1.73
DEG1	YFL001W	WSC2	P53832	503 aa		4.24	□□□□□ -1.73
DEG1	YFL001W	RVB1	Q03940	463 aa	Known RBP	4.24	□□□□□ -1.73
DEG1	YFL001W	RGT2	Q12300	763 aa		4.24	□□□□□ -1.73
DEG1	YFL001W	DET1	Q99288	334 aa	Known RBP	4.24	□□□□□ -1.73
DEG1	YFL001W	ERG9	P29704	444 aa		4.23	□□□□□ -1.73
DEG1	YFL001W	DPH5	P32469	300 aa	Predicted RBP	4.23	□□□□□ -1.73
DEG1	YFL001W	YKL162C	P36052	402 aa		4.23	□□□□□ -1.73
DEG1	YFL001W	MRPL37	P36532	105 aa		4.23	□□□□□ -1.73
DEG1	YFL001W	PET100	P38958	111 aa		4.23	□□□□□ -1.73
DEG1	YFL001W	YNL260C	P53846	198 aa		4.23	□□□□□ -1.73
DEG1	YFL001W	HER2	Q03557	464 aa		4.23	□□□□□ -1.73
DEG1	YFL001W	BCP1	Q06338	283 aa		4.23	□□□□□ -1.73
DEG1	YFL001W	LOT6	Q07923	191 aa		4.23	□□□□□ -1.73
DEG1	YFL001W	YLR108C	Q12259	485 aa		4.23	□□□□□ -1.73
DEG1	YFL001W	YCR024C-B	Q3E7Z8	88 aa		4.23	□□□□□ -1.73
DEG1	YFL001W	PSK1	P31374	1356 aa		4.23	□□□□□ -1.73
DEG1	YFL001W	DCC1	P25559	380 aa		4.22	□□□□□ -1.73
DEG1	YFL001W	RPL5	P26321	297 aa	Known RBP	4.22	□□□□□ -1.73
DEG1	YFL001W	MKK1	P32490	508 aa		4.22	□□□□□ -1.73
DEG1	YFL001W	RAD5	P32849	1169 aa	Predicted RBP	4.22	□□□□□ -1.73
DEG1	YFL001W	ECT1	P33412	323 aa		4.22	□□□□□ -1.73
DEG1	YFL001W	IML3	P38265	245 aa		4.22	□□□□□ -1.73
DEG1	YFL001W	SPT8	P38915	602 aa		4.22	□□□□□ -1.73
DEG1	YFL001W	IDP2	P41939	412 aa		4.22	□□□□□ -1.73
DEG1	YFL001W	EMC2	P47133	292 aa	Known RBP	4.22	□□□□□ -1.73
DEG1	YFL001W	TRF5	P48561	642 aa	Known RBP	4.22	□□□□□ -1.73
DEG1	YFL001W	MRM2	P53123	320 aa		4.22	□□□□□ -1.73
DEG1	YFL001W	YGR266W	P53326	701 aa		4.22	□□□□□ -1.73
DEG1	YFL001W	UBX2	Q04228	584 aa		4.22	□□□□□ -1.73
DEG1	YFL001W	CSI1	Q04368	295 aa		4.22	□□□□□ -1.73
DEG1	YFL001W	CSM3	Q04659	317 aa		4.22	□□□□□ -1.73
DEG1	YFL001W	PRM6	Q04705	352 aa		4.22	□□□□□ -1.73
DEG1	YFL001W	ALE1	Q08548	619 aa		4.22	□□□□□ -1.73
DEG1	YFL001W	HNT3	Q08702	217 aa		4.22	□□□□□ -1.73
DEG1	YFL001W	YPR1	Q12458	312 aa		4.22	□□□□□ -1.73
DEG1	YFL001W	FMP16	Q12497	93 aa		4.22	□□□□□ -1.73
DEG1	YFL001W	MHP1	P43638	1398 aa		4.22	□□□□□ -1.73
DEG1	YFL001W	CYC3	P06182	269 aa		4.21	□□□□□ -1.73
DEG1	YFL001W	ACB1	P31787	87 aa		4.21	□□□□□ -1.73
DEG1	YFL001W	KAR9	P32526	644 aa		4.21	□□□□□ -1.73
DEG1	YFL001W	IME2	P32581	645 aa		4.21	□□□□□ -1.73
DEG1	YFL001W	RPT5	P33297	434 aa	Known RBP	4.21	□□□□□ -1.73
DEG1	YFL001W	TPO5	P36029	618 aa		4.21	□□□□□ -1.73
DEG1	YFL001W	YIL029C	P40538	142 aa		4.21	□□□□□ -1.73
DEG1	YFL001W	YCH1	P42937	148 aa		4.21	□□□□□ -1.73
DEG1	YFL001W	YFL067W	P43537	175 aa		4.21	□□□□□ -1.73
DEG1	YFL001W	NCA3	P46955	337 aa		4.21	□□□□□ -1.73
DEG1	YFL001W	PXR1	P53335	271 aa	Predicted RBP	4.21	□□□□□ -1.73
DEG1	YFL001W	MPP6	P53725	186 aa	Predicted RBP	4.21	□□□□□ -1.73
DEG1	YFL001W	GRS2	Q06817	618 aa		4.21	□□□□□ -1.73
DEG1	YFL001W	YRM1	Q12340	786 aa		4.21	□□□□□ -1.73
DEG1	YFL001W	TRP1	P00912	224 aa		4.21	□□□□□ -1.74
DEG1	YFL001W	PIS1	P06197	220 aa	Known RBP	4.21	□□□□□ -1.74
DEG1	YFL001W	DEG1	P31115	442 aa	Known RBP	4.21	□□□□□ -1.74
DEG1	YFL001W	MMS21	P38632	267 aa		4.21	□□□□□ -1.74
DEG1	YFL001W	YPT35	P38815	214 aa	Known RBP	4.21	□□□□□ -1.74
DEG1	YFL001W	NUP84	P52891	726 aa		4.21	□□□□□ -1.74
DEG1	YFL001W	MTM1	P53320	366 aa		4.21	□□□□□ -1.74
DEG1	YFL001W	YNL050C	P53952	270 aa		4.21	□□□□□ -1.74
DEG1	YFL001W	NUP116	Q02630	1113 aa		4.21	□□□□□ -1.74
DEG1	YFL001W	YMR102C	Q03177	834 aa		4.21	□□□□□ -1.74
DEG1	YFL001W	GRX3	Q03835	250 aa		4.21	□□□□□ -1.74
DEG1	YFL001W	RNH1	Q04740	348 aa		4.21	□□□□□ -1.74
DEG1	YFL001W	SMC5	Q08204	1093 aa		4.21	□□□□□ -1.74
DEG1	YFL001W	ESA1	Q08649	445 aa		4.21	□□□□□ -1.74
DEG1	YFL001W	EAF3	Q12432	401 aa		4.21	□□□□□ -1.74
DEG1	YFL001W	TDH1	P00360	332 aa	Known RBP	4.2	□□□□□ -1.74
DEG1	YFL001W	RBK1	P25332	333 aa		4.2	□□□□□ -1.74
DEG1	YFL001W	CPR4	P25334	318 aa		4.2	□□□□□ -1.74
DEG1	YFL001W	AGA1	P32323	725 aa		4.2	□□□□□ -1.74
DEG1	YFL001W	YMR262W	P38430	313 aa		4.2	□□□□□ -1.74
DEG1	YFL001W	SCC4	P40090	624 aa		4.2	□□□□□ -1.74
DEG1	YFL001W	PRM5	P40476	318 aa		4.2	□□□□□ -1.74
DEG1	YFL001W	CTK3	P46963	296 aa	Predicted RBP	4.2	□□□□□ -1.74
DEG1	YFL001W	LCB3	P47013	409 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms