RNA–Protein interactions for RNA: YDR404C

RPB7, Transcript of RNA polymerase II subunit B16, yeastyeast

Gene RPB7, Length 516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB7YDR404C SPS22P25380 463 aa3.99□□□□□ -1.77
RPB7YDR404C HMX1P32339 317 aa3.99□□□□□ -1.77
RPB7YDR404C YEF1P32622 495 aa3.99□□□□□ -1.77
RPB7YDR404C MTC6P38849 526 aa3.99□□□□□ -1.77
RPB7YDR404C ALP1P38971 573 aa3.99□□□□□ -1.77
RPB7YDR404C LYS12P40495 371 aaKnown RBP3.99□□□□□ -1.77
RPB7YDR404C YDL186WP48568 277 aa3.99□□□□□ -1.77
RPB7YDR404C VTI1Q04338 217 aa3.99□□□□□ -1.77
RPB7YDR404C STE23Q06010 1027 aa3.99□□□□□ -1.77
RPB7YDR404C RAX1Q08760 435 aa3.99□□□□□ -1.77
RPB7YDR404C VPS63O13549 108 aa3.98□□□□□ -1.77
RPB7YDR404C PAB1P04147 577 aaKnown RBP RIP-Chip data3.98□□□□□ -1.77 RIP-Chip
RPB7YDR404C RPS16AP0CX51 143 aaKnown RBP3.98□□□□□ -1.77
RPB7YDR404C RPS16BP0CX52 143 aaKnown RBP3.98□□□□□ -1.77
RPB7YDR404C AGA1P32323 725 aa3.98□□□□□ -1.77
RPB7YDR404C MUD1P32605 298 aaKnown RBP3.98□□□□□ -1.77
RPB7YDR404C HMT1P38074 348 aa3.98□□□□□ -1.77
RPB7YDR404C YHR122WP38829 231 aa3.98□□□□□ -1.77
RPB7YDR404C LCP5P40079 357 aaPredicted RBP3.98□□□□□ -1.77
RPB7YDR404C JLP2P40206 208 aa3.98□□□□□ -1.77
RPB7YDR404C MSO1P53604 210 aaKnown RBP3.98□□□□□ -1.77
RPB7YDR404C COS1P53822 381 aa3.98□□□□□ -1.77
RPB7YDR404C ERV25P54837 211 aaKnown RBP3.98□□□□□ -1.77
RPB7YDR404C MSC3Q05812 728 aa3.98□□□□□ -1.77
RPB7YDR404C ARR1Q06596 294 aa3.98□□□□□ -1.77
RPB7YDR404C GLE1Q12315 538 aa3.98□□□□□ -1.77
RPB7YDR404C CDC37P06101 506 aaKnown RBP3.97□□□□□ -1.77
RPB7YDR404C HAP2P06774 265 aa3.97□□□□□ -1.77
RPB7YDR404C RPC40P07703 335 aaKnown RBP3.97□□□□□ -1.77
RPB7YDR404C RNR2P09938 399 aaKnown RBP3.97□□□□□ -1.77
RPB7YDR404C GAL3P13045 520 aa3.97□□□□□ -1.77
RPB7YDR404C CLN3P13365 580 aa3.97□□□□□ -1.77
RPB7YDR404C HEM15P16622 393 aa3.97□□□□□ -1.77
RPB7YDR404C GPX2P38143 162 aa3.97□□□□□ -1.77
RPB7YDR404C SSO2P39926 295 aa3.97□□□□□ -1.77
RPB7YDR404C ABM1P47146 123 aa3.97□□□□□ -1.77
RPB7YDR404C YGL114WP53134 725 aa3.97□□□□□ -1.77
RPB7YDR404C CRZ1P53968 678 aa3.97□□□□□ -1.77
RPB7YDR404C YOR338WQ99326 363 aa3.97□□□□□ -1.77
RPB7YDR404C DBP3P20447 523 aaKnown RBP3.96□□□□□ -1.78
RPB7YDR404C DAL80P26343 269 aa3.96□□□□□ -1.78
RPB7YDR404C PHA2P32452 334 aa3.96□□□□□ -1.78
RPB7YDR404C EFB1P32471 206 aaKnown RBP3.96□□□□□ -1.78
RPB7YDR404C AIM20P40451 204 aa3.96□□□□□ -1.78
RPB7YDR404C IDP2P41939 412 aa3.96□□□□□ -1.78
RPB7YDR404C YFL067WP43537 175 aa3.96□□□□□ -1.78
RPB7YDR404C YFR018CP43599 363 aa3.96□□□□□ -1.78
RPB7YDR404C YGR266WP53326 701 aa3.96□□□□□ -1.78
RPB7YDR404C YNL146WP53906 100 aa3.96□□□□□ -1.78
RPB7YDR404C SMP3Q04174 516 aa3.96□□□□□ -1.78
RPB7YDR404C HNT3Q08702 217 aa3.96□□□□□ -1.78
RPB7YDR404C TIP41Q12199 356 aa3.96□□□□□ -1.78
RPB7YDR404C HFA1P32874 2273 aa3.95□□□□□ -1.78
RPB7YDR404C ILV1P00927 576 aaKnown RBP3.95□□□□□ -1.78
RPB7YDR404C GCD2P12754 651 aaPredicted RBP3.95□□□□□ -1.78
RPB7YDR404C CKI1P20485 582 aa3.95□□□□□ -1.78
RPB7YDR404C PET18P25362 215 aa3.95□□□□□ -1.78
RPB7YDR404C PPQ1P32945 549 aa3.95□□□□□ -1.78
RPB7YDR404C MRPL40P36534 297 aa3.95□□□□□ -1.78
RPB7YDR404C GEP4P38812 185 aa3.95□□□□□ -1.78
RPB7YDR404C SBE22P38814 852 aa3.95□□□□□ -1.78
RPB7YDR404C MNN9P39107 395 aaKnown RBP3.95□□□□□ -1.78
RPB7YDR404C PRP39P39682 629 aaKnown RBP3.95□□□□□ -1.78
RPB7YDR404C YER186CP40101 306 aa3.95□□□□□ -1.78
RPB7YDR404C NCA3P46955 337 aa3.95□□□□□ -1.78
RPB7YDR404C YHC3P47040 408 aa3.95□□□□□ -1.78
RPB7YDR404C ARP5P53946 755 aa3.95□□□□□ -1.78
RPB7YDR404C YMR317WQ04893 1140 aa3.95□□□□□ -1.78
RPB7YDR404C CUR1Q06469 252 aa3.95□□□□□ -1.78
RPB7YDR404C YLR108CQ12259 485 aa3.95□□□□□ -1.78
RPB7YDR404C SPO24Q3E752 67 aa3.95□□□□□ -1.78
RPB7YDR404C YLL053CP0CD98 152 aa3.94□□□□□ -1.78
RPB7YDR404C VAM7P32912 316 aa3.94□□□□□ -1.78
RPB7YDR404C TIR2P33890 251 aa3.94□□□□□ -1.78
RPB7YDR404C SKI2P35207 1287 aaKnown RBP RIP-Chip data3.94□□□□□ -1.78not detected
RPB7YDR404C YAT2P40017 923 aa3.94□□□□□ -1.78
RPB7YDR404C FIS1P40515 155 aa3.94□□□□□ -1.78
RPB7YDR404C HER2Q03557 464 aa3.94□□□□□ -1.78
RPB7YDR404C DNL4Q08387 944 aaPredicted RBP3.94□□□□□ -1.78
RPB7YDR404C NDD1Q08887 554 aa3.94□□□□□ -1.78
RPB7YDR404C YPQ1Q12010 308 aa3.94□□□□□ -1.78
RPB7YDR404C PFK27Q12471 397 aaPredicted RBP3.94□□□□□ -1.78
RPB7YDR404C YCL021W-AQ96VH3 125 aa3.94□□□□□ -1.78
RPB7YDR404C CYC3P06182 269 aa3.93□□□□□ -1.78
RPB7YDR404C RPL4AP10664 362 aaKnown RBP3.93□□□□□ -1.78
RPB7YDR404C MRPL8P22353 238 aa3.93□□□□□ -1.78
RPB7YDR404C MXR2P25566 168 aa3.93□□□□□ -1.78
RPB7YDR404C ZUO1P32527 433 aaKnown RBP3.93□□□□□ -1.78
RPB7YDR404C TIF5P38431 405 aaKnown RBP3.93□□□□□ -1.78
RPB7YDR404C WSC4P38739 605 aa3.93□□□□□ -1.78
RPB7YDR404C END3P39013 349 aa3.93□□□□□ -1.78
RPB7YDR404C COX14P39103 70 aa3.93□□□□□ -1.78
RPB7YDR404C RTT105P40063 208 aa3.93□□□□□ -1.78
RPB7YDR404C YIL067CP40514 678 aa3.93□□□□□ -1.78
RPB7YDR404C WWM1P43582 211 aaKnown RBP3.93□□□□□ -1.78
RPB7YDR404C RPL4BP49626 362 aaKnown RBP3.93□□□□□ -1.78
RPB7YDR404C IMP4P53941 290 aaKnown RBP3.93□□□□□ -1.78
RPB7YDR404C YLR297WQ05899 129 aa3.93□□□□□ -1.78
RPB7YDR404C SMD2Q06217 110 aaKnown RBP3.93□□□□□ -1.78
RPB7YDR404C MDM36Q06820 579 aa3.93□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 63.5 ms