RNA–Protein interactions for RNA: YDR392W

SPT3, Transcript of Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, yeastyeast

Gene SPT3, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT3YDR392W YGR111WP53265 400 aa3.85□□□□□ -1.79
SPT3YDR392W RQC1Q05468 723 aaKnown RBP3.85□□□□□ -1.79
SPT3YDR392W PAL1Q05518 499 aaKnown RBP3.85□□□□□ -1.79
SPT3YDR392W IPK1Q06667 281 aa3.85□□□□□ -1.79
SPT3YDR392W NUR1Q12066 484 aa3.85□□□□□ -1.79
SPT3YDR392W YCL048W-AQ2V2Q2 79 aa3.85□□□□□ -1.79
SPT3YDR392W SRN2Q99176 213 aa3.85□□□□□ -1.79
SPT3YDR392W PET111P08468 800 aa3.84□□□□□ -1.79
SPT3YDR392W PET123P17558 318 aa3.84□□□□□ -1.79
SPT3YDR392W YCR099CP25657 155 aa3.84□□□□□ -1.79
SPT3YDR392W SWH1P35845 1188 aa3.84□□□□□ -1.79
SPT3YDR392W AUR1P36107 401 aaPredicted RBP3.84□□□□□ -1.79
SPT3YDR392W FES1P38260 290 aa3.84□□□□□ -1.79
SPT3YDR392W GDT1P38301 280 aaPredicted RBP3.84□□□□□ -1.79
SPT3YDR392W HXT6P39003 570 aaKnown RBP3.84□□□□□ -1.79
SPT3YDR392W HXT7P39004 570 aa3.84□□□□□ -1.79
SPT3YDR392W PET130P47065 347 aa3.84□□□□□ -1.79
SPT3YDR392W YDL183CP48569 320 aa3.84□□□□□ -1.79
SPT3YDR392W SDT1P53078 280 aa3.84□□□□□ -1.79
SPT3YDR392W NGL3Q03210 505 aa3.84□□□□□ -1.79
SPT3YDR392W YPR091CQ06833 770 aa3.84□□□□□ -1.79
SPT3YDR392W REX4Q08237 289 aa3.84□□□□□ -1.79
SPT3YDR392W ETT1Q08421 412 aaKnown RBP3.84□□□□□ -1.79
SPT3YDR392W RRP42Q12277 265 aaPredicted RBP3.84□□□□□ -1.79
SPT3YDR392W SPE4Q12455 300 aa3.84□□□□□ -1.79
SPT3YDR392W SEC14P24280 304 aaKnown RBP3.83□□□□□ -1.8
SPT3YDR392W PUT3P25502 979 aaPredicted RBP3.83□□□□□ -1.8
SPT3YDR392W PRP19P32523 503 aaKnown RBP3.83□□□□□ -1.8
SPT3YDR392W SOR1P35497 357 aaKnown RBP3.83□□□□□ -1.8
SPT3YDR392W MRP21P38175 177 aa3.83□□□□□ -1.8
SPT3YDR392W CIN4P39110 191 aa3.83□□□□□ -1.8
SPT3YDR392W RPL6AQ02326 176 aaKnown RBP3.83□□□□□ -1.8
SPT3YDR392W PDR8Q06149 701 aa3.83□□□□□ -1.8
SPT3YDR392W TAZ1Q06510 381 aa3.83□□□□□ -1.8
SPT3YDR392W SOR2Q07786 357 aa3.83□□□□□ -1.8
SPT3YDR392W PSF1Q12488 208 aa3.83□□□□□ -1.8
SPT3YDR392W YOL087CQ99247 1116 aa3.83□□□□□ -1.8
SPT3YDR392W COQ3P27680 312 aa3.82□□□□□ -1.8
SPT3YDR392W ZUO1P32527 433 aaKnown RBP3.82□□□□□ -1.8
SPT3YDR392W TIF3P34167 436 aaKnown RBP3.82□□□□□ -1.8
SPT3YDR392W RRP1P35178 278 aaPredicted RBP3.82□□□□□ -1.8
SPT3YDR392W OAF3P36023 863 aa3.82□□□□□ -1.8
SPT3YDR392W MED8P38304 223 aa3.82□□□□□ -1.8
SPT3YDR392W SMM1P53720 384 aaKnown RBP3.82□□□□□ -1.8
SPT3YDR392W YPL039WQ03080 316 aa3.82□□□□□ -1.8
SPT3YDR392W GRX3Q03835 250 aa3.82□□□□□ -1.8
SPT3YDR392W BUD22Q04347 519 aaKnown RBP3.82□□□□□ -1.8
SPT3YDR392W YLL056CQ12177 298 aa3.82□□□□□ -1.8
SPT3YDR392W RUP1Q12242 671 aa3.82□□□□□ -1.8
SPT3YDR392W LDB17Q12342 491 aa3.82□□□□□ -1.8
SPT3YDR392W RHO1P06780 209 aaKnown RBP3.81□□□□□ -1.8
SPT3YDR392W DGR2P32330 852 aa3.81□□□□□ -1.8
SPT3YDR392W MDH3P32419 343 aaKnown RBP RIP-Chip data3.81□□□□□ -1.8not detected
SPT3YDR392W CNS1P33313 385 aa3.81□□□□□ -1.8
SPT3YDR392W DIA4P38705 446 aaPredicted RBP3.81□□□□□ -1.8
SPT3YDR392W IRC5P43610 853 aa3.81□□□□□ -1.8
SPT3YDR392W LYS20P48570 428 aaKnown RBP3.81□□□□□ -1.8
SPT3YDR392W PEX8P53248 589 aa3.81□□□□□ -1.8
SPT3YDR392W RCE1Q03530 315 aa3.81□□□□□ -1.8
SPT3YDR392W YMR087WQ04299 284 aa3.81□□□□□ -1.8
SPT3YDR392W BCH1Q05029 724 aa3.81□□□□□ -1.8
SPT3YDR392W MRPL51Q06090 140 aaPredicted RBP3.81□□□□□ -1.8
SPT3YDR392W ATG23Q06671 453 aa3.81□□□□□ -1.8
SPT3YDR392W YTM1Q12024 460 aaPredicted RBP3.81□□□□□ -1.8
SPT3YDR392W LYS21Q12122 440 aaKnown RBP3.81□□□□□ -1.8
SPT3YDR392W RNH203Q12338 110 aa3.81□□□□□ -1.8
SPT3YDR392W RRP36Q12481 300 aaPredicted RBP3.81□□□□□ -1.8
SPT3YDR392W ATP2P00830 511 aaKnown RBP3.8□□□□□ -1.8
SPT3YDR392W GPH1P06738 902 aaKnown RBP3.8□□□□□ -1.8
SPT3YDR392W SEC53P07283 254 aaKnown RBP3.8□□□□□ -1.8
SPT3YDR392W SEC12P11655 471 aa3.8□□□□□ -1.8
SPT3YDR392W RPL3P14126 387 aaKnown RBP3.8□□□□□ -1.8
SPT3YDR392W RPS0AP32905 252 aaKnown RBP3.8□□□□□ -1.8
SPT3YDR392W MSN2P33748 704 aa3.8□□□□□ -1.8
SPT3YDR392W RTT107P38850 1070 aa3.8□□□□□ -1.8
SPT3YDR392W RPA43P46669 326 aa3.8□□□□□ -1.8
SPT3YDR392W HOS2P53096 452 aaPredicted RBP3.8□□□□□ -1.8
SPT3YDR392W MTM1P53320 366 aa3.8□□□□□ -1.8
SPT3YDR392W SMA2Q04658 369 aa3.8□□□□□ -1.8
SPT3YDR392W RMD5Q12508 421 aa3.8□□□□□ -1.8
SPT3YDR392W NSP1P14907 823 aaKnown RBP3.79□□□□□ -1.8
SPT3YDR392W PET9P18239 318 aaKnown RBP3.79□□□□□ -1.8
SPT3YDR392W NIP100P33420 868 aa3.79□□□□□ -1.8
SPT3YDR392W DOA1P36037 715 aa3.79□□□□□ -1.8
SPT3YDR392W RRP14P36080 434 aaKnown RBP3.79□□□□□ -1.8
SPT3YDR392W BNA4P38169 460 aa3.79□□□□□ -1.8
SPT3YDR392W RKM3P38222 552 aa3.79□□□□□ -1.8
SPT3YDR392W FAT1P38225 669 aa3.79□□□□□ -1.8
SPT3YDR392W CUE1P38428 203 aa3.79□□□□□ -1.8
SPT3YDR392W VPS41P38959 992 aa3.79□□□□□ -1.8
SPT3YDR392W YIL001WP40560 513 aa3.79□□□□□ -1.8
SPT3YDR392W BRO1P48582 844 aa3.79□□□□□ -1.8
SPT3YDR392W CPR6P53691 371 aaKnown RBP3.79□□□□□ -1.8
SPT3YDR392W YNL260CP53846 198 aa3.79□□□□□ -1.8
SPT3YDR392W HNT3Q08702 217 aa3.79□□□□□ -1.8
SPT3YDR392W CWC2Q12046 339 aaPredicted RBP3.79□□□□□ -1.8
SPT3YDR392W ATX2Q12067 313 aa3.79□□□□□ -1.8
SPT3YDR392W UBX3Q12229 455 aa3.79□□□□□ -1.8
SPT3YDR392W UNG1P12887 359 aa3.78□□□□□ -1.8
SPT3YDR392W RPN12P32496 274 aa3.78□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 27 ms