RNA–Protein interactions for RNA: YDR136C

VPS61, Transcript of Dubious open reading frame, yeastyeast

Gene VPS61, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS61YDR136C COG7P53195 279 aa5.83□□□□□ -1.48
VPS61YDR136C MEP3P53390 489 aa5.83□□□□□ -1.48
VPS61YDR136C COS1P53822 381 aa5.83□□□□□ -1.48
VPS61YDR136C CWC25P53854 179 aaKnown RBP5.83□□□□□ -1.48
VPS61YDR136C MTQ1P53944 314 aa5.83□□□□□ -1.48
VPS61YDR136C TGL2P54857 326 aa5.83□□□□□ -1.48
VPS61YDR136C MSC1Q03104 513 aa5.83□□□□□ -1.48
VPS61YDR136C EAR1Q03212 550 aa5.83□□□□□ -1.48
VPS61YDR136C PLM2Q04383 521 aa5.83□□□□□ -1.48
VPS61YDR136C MFB1Q04922 465 aa5.83□□□□□ -1.48
VPS61YDR136C COX20Q04935 205 aa5.83□□□□□ -1.48
VPS61YDR136C YLR224WQ05947 369 aa5.83□□□□□ -1.48
VPS61YDR136C PDR8Q06149 701 aa5.83□□□□□ -1.48
VPS61YDR136C PCL9Q12477 304 aa5.83□□□□□ -1.48
VPS61YDR136C RRP12Q12754 1228 aaKnown RBP5.83□□□□□ -1.48
VPS61YDR136C HIS3P06633 220 aa5.82□□□□□ -1.48
VPS61YDR136C SEC12P11655 471 aa5.82□□□□□ -1.48
VPS61YDR136C PHO80P20052 293 aa5.82□□□□□ -1.48
VPS61YDR136C RPA135P22138 1203 aaKnown RBP5.82□□□□□ -1.48
VPS61YDR136C EXG1P23776 448 aaKnown RBP5.82□□□□□ -1.48
VPS61YDR136C CPR3P25719 182 aa5.82□□□□□ -1.48
VPS61YDR136C KRE6P32486 720 aa5.82□□□□□ -1.48
VPS61YDR136C NAB2P32505 525 aaKnown RBP RIP-Chip data5.82□□□□□ -1.48not detected
VPS61YDR136C MSS1P32559 526 aaPredicted RBP5.82□□□□□ -1.48
VPS61YDR136C PUB1P32588 453 aaKnown RBP RIP-Chip data5.82□□□□□ -1.48not detected
VPS61YDR136C SHE2P36068 246 aaKnown RBP RIP-Chip data5.82□□□□□ -1.48not detected
VPS61YDR136C APL3P38065 1025 aa5.82□□□□□ -1.48
VPS61YDR136C BNA4P38169 460 aa5.82□□□□□ -1.48
VPS61YDR136C RRN10P38204 145 aa5.82□□□□□ -1.48
VPS61YDR136C ALP1P38971 573 aa5.82□□□□□ -1.48
VPS61YDR136C YEL068CP39977 110 aa5.82□□□□□ -1.48
VPS61YDR136C YIL165CP40446 119 aa5.82□□□□□ -1.48
VPS61YDR136C PKP1P40530 394 aa5.82□□□□□ -1.48
VPS61YDR136C FAF1P40546 346 aaPredicted RBP5.82□□□□□ -1.48
VPS61YDR136C MAD2P40958 196 aa5.82□□□□□ -1.48
VPS61YDR136C CIN1P40987 1014 aa5.82□□□□□ -1.48
VPS61YDR136C BAT2P47176 376 aaKnown RBP5.82□□□□□ -1.48
VPS61YDR136C UBC9P50623 157 aaPredicted RBP5.82□□□□□ -1.48
VPS61YDR136C SPT20P50875 604 aa5.82□□□□□ -1.48
VPS61YDR136C UBC12P52491 188 aa5.82□□□□□ -1.48
VPS61YDR136C YNR040WP53736 256 aa5.82□□□□□ -1.48
VPS61YDR136C DUS1P53759 423 aaKnown RBP5.82□□□□□ -1.48
VPS61YDR136C RHO4Q00246 291 aa5.82□□□□□ -1.48
VPS61YDR136C RPL6AQ02326 176 aaKnown RBP5.82□□□□□ -1.48
VPS61YDR136C ROT1Q03691 256 aa5.82□□□□□ -1.48
VPS61YDR136C TY1A-DR2Q03964 440 aaKnown RBP5.82□□□□□ -1.48
VPS61YDR136C SSK1Q07084 712 aa5.82□□□□□ -1.48
VPS61YDR136C REX4Q08237 289 aa5.82□□□□□ -1.48
VPS61YDR136C FRE3Q08905 711 aa5.82□□□□□ -1.48
VPS61YDR136C ATG41Q12048 136 aa5.82□□□□□ -1.48
VPS61YDR136C YPR022CQ12139 1133 aa5.82□□□□□ -1.48
VPS61YDR136C TPO4Q12256 659 aa5.82□□□□□ -1.48
VPS61YDR136C ATP14Q12349 124 aa5.82□□□□□ -1.48
VPS61YDR136C YGR161W-CQ3E744 92 aa5.82□□□□□ -1.48
VPS61YDR136C CAN1P04817 590 aa5.81□□□□□ -1.48
VPS61YDR136C YOL162WP0CF19 215 aa5.81□□□□□ -1.48
VPS61YDR136C HOP1P20050 605 aa5.81□□□□□ -1.48
VPS61YDR136C KIN3P22209 435 aa5.81□□□□□ -1.48
VPS61YDR136C APN1P22936 367 aa5.81□□□□□ -1.48
VPS61YDR136C TEF4P36008 412 aaKnown RBP5.81□□□□□ -1.48
VPS61YDR136C YKL151CP36059 337 aa5.81□□□□□ -1.48
VPS61YDR136C RTC2P38279 296 aa5.81□□□□□ -1.48
VPS61YDR136C RPS20P38701 121 aaKnown RBP5.81□□□□□ -1.48
VPS61YDR136C RRF1P38771 230 aa5.81□□□□□ -1.48
VPS61YDR136C CHL4P38907 458 aa5.81□□□□□ -1.48
VPS61YDR136C NAB3P38996 802 aaKnown RBP RIP-Chip data5.81□□□□□ -1.48not detected
VPS61YDR136C MRPS18P42847 217 aa5.81□□□□□ -1.48
VPS61YDR136C LSB6P42951 607 aa5.81□□□□□ -1.48
VPS61YDR136C HAM1P47119 197 aaKnown RBP5.81□□□□□ -1.48
VPS61YDR136C MAL11P53048 616 aa5.81□□□□□ -1.48
VPS61YDR136C PAU12P53343 120 aa5.81□□□□□ -1.48
VPS61YDR136C YPL034WQ03083 165 aa5.81□□□□□ -1.48
VPS61YDR136C RPC11Q04307 110 aaPredicted RBP5.81□□□□□ -1.48
VPS61YDR136C EMI2Q04409 500 aaKnown RBP5.81□□□□□ -1.48
VPS61YDR136C TMN2Q04562 672 aa5.81□□□□□ -1.48
VPS61YDR136C ARV1Q06541 321 aa5.81□□□□□ -1.48
VPS61YDR136C MLC2Q06580 163 aa5.81□□□□□ -1.48
VPS61YDR136C SKI7Q08491 747 aaPredicted RBP5.81□□□□□ -1.48
VPS61YDR136C ATP16Q12165 160 aa5.81□□□□□ -1.48
VPS61YDR136C TIR4Q12218 487 aaPredicted RBP5.81□□□□□ -1.48
VPS61YDR136C FRE6Q12473 712 aa5.81□□□□□ -1.48
VPS61YDR136C PSF1Q12488 208 aa5.81□□□□□ -1.48
VPS61YDR136C YPR064WQ12492 139 aa5.81□□□□□ -1.48
VPS61YDR136C YLR099W-AQ3E798 87 aa5.81□□□□□ -1.48
VPS61YDR136C GCN4P03069 281 aa5.8□□□□□ -1.48
VPS61YDR136C YGL041W-AP0C5N3 154 aa5.8□□□□□ -1.48
VPS61YDR136C DSF1P0CX08 502 aa5.8□□□□□ -1.48
VPS61YDR136C YNR073CP0CX09 502 aa5.8□□□□□ -1.48
VPS61YDR136C NHP6BP11633 99 aaKnown RBP5.8□□□□□ -1.48
VPS61YDR136C DPM1P14020 267 aaKnown RBP5.8□□□□□ -1.48
VPS61YDR136C ERD2P18414 219 aa5.8□□□□□ -1.48
VPS61YDR136C PRP28P23394 588 aa5.8□□□□□ -1.48
VPS61YDR136C CAM1P29547 415 aaKnown RBP5.8□□□□□ -1.48
VPS61YDR136C SSH4P32343 579 aa5.8□□□□□ -1.48
VPS61YDR136C NTH1P32356 751 aa5.8□□□□□ -1.48
VPS61YDR136C PDR3P33200 976 aa5.8□□□□□ -1.48
VPS61YDR136C DOA1P36037 715 aa5.8□□□□□ -1.48
VPS61YDR136C ANR2P36090 516 aaPredicted RBP5.8□□□□□ -1.48
VPS61YDR136C DTR1P38125 572 aa5.8□□□□□ -1.48
VPS61YDR136C IFA38P38286 347 aa5.8□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms