RNA–Protein interactions for RNA: YDR108W

TRS85, Transcript of Component of transport protein particle (TRAPP) complex III, yeastyeast

Gene TRS85, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS85YDR108W Q0142Q9ZZW4 58 aa3.95□□□□□ -1.78
TRS85YDR108W HXK2P04807 486 aaKnown RBP3.94□□□□□ -1.78
TRS85YDR108W CDC7P06243 507 aa3.94□□□□□ -1.78
TRS85YDR108W NAM2P11325 894 aa3.94□□□□□ -1.78
TRS85YDR108W RPB3P16370 318 aaKnown RBP3.94□□□□□ -1.78
TRS85YDR108W SNF6P18888 332 aa3.94□□□□□ -1.78
TRS85YDR108W AGP1P25376 633 aa3.94□□□□□ -1.78
TRS85YDR108W PEX4P29340 183 aa3.94□□□□□ -1.78
TRS85YDR108W PAH1P32567 862 aa3.94□□□□□ -1.78
TRS85YDR108W CSG2P35206 410 aa3.94□□□□□ -1.78
TRS85YDR108W RRN10P38204 145 aa3.94□□□□□ -1.78
TRS85YDR108W YBR071WP38243 211 aa3.94□□□□□ -1.78
TRS85YDR108W EHT1P38295 451 aa3.94□□□□□ -1.78
TRS85YDR108W FET3P38993 636 aa3.94□□□□□ -1.78
TRS85YDR108W MGS1P40151 587 aa3.94□□□□□ -1.78
TRS85YDR108W PTR3P43606 678 aa3.94□□□□□ -1.78
TRS85YDR108W YAR1P46683 200 aa3.94□□□□□ -1.78
TRS85YDR108W SSY5P47002 699 aa3.94□□□□□ -1.78
TRS85YDR108W PUS4P48567 403 aaKnown RBP3.94□□□□□ -1.78
TRS85YDR108W SOL1P50278 321 aa3.94□□□□□ -1.78
TRS85YDR108W YNR014WP53719 212 aa3.94□□□□□ -1.78
TRS85YDR108W ARG5,6Q01217 863 aa3.94□□□□□ -1.78
TRS85YDR108W MAP1Q01662 387 aaKnown RBP RIP-Chip data3.94□□□□□ -1.78not detected
TRS85YDR108W UBP16Q02863 499 aa3.94□□□□□ -1.78
TRS85YDR108W SKY1Q03656 742 aa3.94□□□□□ -1.78
TRS85YDR108W YAP6Q03935 383 aa3.94□□□□□ -1.78
TRS85YDR108W AIM32Q04689 311 aa3.94□□□□□ -1.78
TRS85YDR108W RIF2Q06208 395 aa3.94□□□□□ -1.78
TRS85YDR108W RRG7Q08774 242 aaPredicted RBP3.94□□□□□ -1.78
TRS85YDR108W TCO89Q08921 799 aa3.94□□□□□ -1.78
TRS85YDR108W SRO7Q12038 1033 aa3.94□□□□□ -1.78
TRS85YDR108W TGS1Q12052 315 aa3.94□□□□□ -1.78
TRS85YDR108W MHT1Q12525 324 aa3.94□□□□□ -1.78
TRS85YDR108W YPR145C-AQ2V2P0 78 aa3.94□□□□□ -1.78
TRS85YDR108W TY1B-NL2Q99337 1749 aaKnown RBP3.94□□□□□ -1.78
TRS85YDR108W GLT1Q12680 2145 aaKnown RBP3.94□□□□□ -1.78
TRS85YDR108W GAL4P04386 881 aa3.94□□□□□ -1.78
TRS85YDR108W RPS31P05759 152 aaKnown RBP3.94□□□□□ -1.78
TRS85YDR108W ALG7P07286 448 aa3.94□□□□□ -1.78
TRS85YDR108W PRB1P09232 635 aa3.94□□□□□ -1.78
TRS85YDR108W SEC59P20048 519 aa3.94□□□□□ -1.78
TRS85YDR108W PEX34P25584 144 aa3.94□□□□□ -1.78
TRS85YDR108W ADE1P27616 306 aa3.94□□□□□ -1.78
TRS85YDR108W CAT2P32796 670 aaKnown RBP3.94□□□□□ -1.78
TRS85YDR108W YPT7P32939 208 aa3.94□□□□□ -1.78
TRS85YDR108W MRPL16P38064 232 aa3.94□□□□□ -1.78
TRS85YDR108W TAT1P38085 619 aa3.94□□□□□ -1.78
TRS85YDR108W YBR220CP38318 560 aa3.94□□□□□ -1.78
TRS85YDR108W FAD1P38913 306 aa3.94□□□□□ -1.78
TRS85YDR108W GAT2P40209 560 aa3.94□□□□□ -1.78
TRS85YDR108W SWM2P40342 146 aa3.94□□□□□ -1.78
TRS85YDR108W SAM37P50110 327 aa3.94□□□□□ -1.78
TRS85YDR108W YGL185CP53100 379 aa3.94□□□□□ -1.78
TRS85YDR108W MPA43P53583 542 aaPredicted RBP3.94□□□□□ -1.78
TRS85YDR108W YNR066CP53752 436 aa3.94□□□□□ -1.78
TRS85YDR108W MET14Q02196 202 aa3.94□□□□□ -1.78
TRS85YDR108W GSF2Q04697 403 aaKnown RBP3.94□□□□□ -1.78
TRS85YDR108W GPI11Q06636 219 aa3.94□□□□□ -1.78
TRS85YDR108W AIM6Q07716 390 aa3.94□□□□□ -1.78
TRS85YDR108W REX4Q08237 289 aa3.94□□□□□ -1.78
TRS85YDR108W MED7Q08278 222 aa3.94□□□□□ -1.78
TRS85YDR108W LEU9Q12166 604 aaKnown RBP3.94□□□□□ -1.78
TRS85YDR108W YPL245WQ12179 454 aaKnown RBP3.94□□□□□ -1.78
TRS85YDR108W YDR018CQ12185 396 aa3.94□□□□□ -1.78
TRS85YDR108W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.94□□□□□ -1.78not detected
TRS85YDR108W RTN2Q12443 393 aa3.94□□□□□ -1.78
TRS85YDR108W HBN1Q96VH4 193 aa3.94□□□□□ -1.78
TRS85YDR108W FSH3Q99369 266 aa3.94□□□□□ -1.78
TRS85YDR108W FLO11P08640 1367 aa3.94□□□□□ -1.78
TRS85YDR108W YRF1-1P0CX20 1796 aa3.94□□□□□ -1.78
TRS85YDR108W YRF1-5P0CX21 1796 aa3.94□□□□□ -1.78
TRS85YDR108W YRF1-8P0CX22 1796 aa3.94□□□□□ -1.78
TRS85YDR108W TIM9O74700 87 aa3.93□□□□□ -1.78
TRS85YDR108W RHO2P06781 192 aa3.93□□□□□ -1.78
TRS85YDR108W CDC33P07260 213 aaKnown RBP3.93□□□□□ -1.78
TRS85YDR108W NAR1P23503 491 aaKnown RBP3.93□□□□□ -1.78
TRS85YDR108W RHB1P25378 209 aa3.93□□□□□ -1.78
TRS85YDR108W ERG1P32476 496 aaKnown RBP3.93□□□□□ -1.78
TRS85YDR108W SKT5P34226 696 aa3.93□□□□□ -1.78
TRS85YDR108W YUH1P35127 236 aa3.93□□□□□ -1.78
TRS85YDR108W APL3P38065 1025 aa3.93□□□□□ -1.78
TRS85YDR108W FMO1P38866 432 aa3.93□□□□□ -1.78
TRS85YDR108W YAR028WP39548 234 aa3.93□□□□□ -1.78
TRS85YDR108W MET28P40573 187 aa3.93□□□□□ -1.78
TRS85YDR108W PHO86P46956 311 aa3.93□□□□□ -1.78
TRS85YDR108W PMT3P47190 753 aa3.93□□□□□ -1.78
TRS85YDR108W ALT2P52892 507 aa3.93□□□□□ -1.78
TRS85YDR108W YGL159WP53110 370 aa3.93□□□□□ -1.78
TRS85YDR108W ERV29P53337 310 aa3.93□□□□□ -1.78
TRS85YDR108W YDR366CP87287 132 aa3.93□□□□□ -1.78
TRS85YDR108W RPS15Q01855 142 aaKnown RBP3.93□□□□□ -1.78
TRS85YDR108W SLD5Q03406 294 aa3.93□□□□□ -1.78
TRS85YDR108W SHH3Q04487 196 aa3.93□□□□□ -1.78
TRS85YDR108W YDR124WQ04608 324 aa3.93□□□□□ -1.78
TRS85YDR108W YDR215CQ12240 137 aa3.93□□□□□ -1.78
TRS85YDR108W YDL199CQ12407 687 aa3.93□□□□□ -1.78
TRS85YDR108W PSF1Q12488 208 aa3.93□□□□□ -1.78
TRS85YDR108W KCS1Q12494 1050 aa3.93□□□□□ -1.78
TRS85YDR108W RMD5Q12508 421 aa3.93□□□□□ -1.78
TRS85YDR108W CMR1Q12510 522 aaKnown RBP3.93□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms