RNA–Protein interactions for RNA: YDR052C

DBF4, Transcript of Regulatory subunit of Cdc7p-Dbf4p kinase complex, yeast

Gene DBF4, Length 2,115 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBF4	YDR052C	TAT1	P38085	619 aa		4.92	□□□□□ -1.62
DBF4	YDR052C	YBR220C	P38318	560 aa		4.92	□□□□□ -1.62
DBF4	YDR052C	MDM31	P38880	579 aa		4.92	□□□□□ -1.62
DBF4	YDR052C	BUR6	P40096	142 aa		4.92	□□□□□ -1.62
DBF4	YDR052C	GAT2	P40209	560 aa		4.92	□□□□□ -1.62
DBF4	YDR052C	VMA21	P41806	77 aa		4.92	□□□□□ -1.62
DBF4	YDR052C	FIG4	P42837	879 aa		4.92	□□□□□ -1.62
DBF4	YDR052C	LSB3	P43603	459 aa	Known RBP	4.92	□□□□□ -1.62
DBF4	YDR052C	NUP57	P48837	541 aa		4.92	□□□□□ -1.62
DBF4	YDR052C	YGL204C	P53089	101 aa		4.92	□□□□□ -1.62
DBF4	YDR052C	YPR003C	P53394	754 aa		4.92	□□□□□ -1.62
DBF4	YDR052C	YNR066C	P53752	436 aa		4.92	□□□□□ -1.62
DBF4	YDR052C	NMA111	P53920	997 aa		4.92	□□□□□ -1.62
DBF4	YDR052C	SAE3	P89114	91 aa		4.92	□□□□□ -1.62
DBF4	YDR052C	RIM13	Q03792	727 aa		4.92	□□□□□ -1.62
DBF4	YDR052C	CTK1	Q03957	528 aa	Known RBP	4.92	□□□□□ -1.62
DBF4	YDR052C	DOT1	Q04089	582 aa	Known RBP	4.92	□□□□□ -1.62
DBF4	YDR052C	CUE4	Q04201	117 aa	Predicted RBP	4.92	□□□□□ -1.62
DBF4	YDR052C	AIM32	Q04689	311 aa		4.92	□□□□□ -1.62
DBF4	YDR052C	CDC123	Q05791	360 aa		4.92	□□□□□ -1.62
DBF4	YDR052C	AIM6	Q07716	390 aa		4.92	□□□□□ -1.62
DBF4	YDR052C	BUD20	Q08004	166 aa	Predicted RBP	4.92	□□□□□ -1.62
DBF4	YDR052C	MED7	Q08278	222 aa		4.92	□□□□□ -1.62
DBF4	YDR052C	YDL176W	Q12027	708 aa		4.92	□□□□□ -1.62
DBF4	YDR052C	LEU9	Q12166	604 aa	Known RBP	4.92	□□□□□ -1.62
DBF4	YDR052C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
DBF4	YDR052C	SEC59	P20048	519 aa		4.91	□□□□□ -1.62
DBF4	YDR052C	AGP1	P25376	633 aa		4.91	□□□□□ -1.62
DBF4	YDR052C	ATG15	P25641	520 aa		4.91	□□□□□ -1.62
DBF4	YDR052C	BUB2	P26448	306 aa	Predicted RBP	4.91	□□□□□ -1.62
DBF4	YDR052C	ERG1	P32476	496 aa	Known RBP	4.91	□□□□□ -1.62
DBF4	YDR052C	CSG2	P35206	410 aa		4.91	□□□□□ -1.62
DBF4	YDR052C	TMA19	P35691	167 aa	Known RBP	4.91	□□□□□ -1.62
DBF4	YDR052C	RMA1	P36001	430 aa	Known RBP	4.91	□□□□□ -1.62
DBF4	YDR052C	GPT2	P36148	743 aa		4.91	□□□□□ -1.62
DBF4	YDR052C	TVP38	P36164	337 aa		4.91	□□□□□ -1.62
DBF4	YDR052C	SDH4	P37298	181 aa		4.91	□□□□□ -1.62
DBF4	YDR052C	RCK1	P38622	512 aa		4.91	□□□□□ -1.62
DBF4	YDR052C	MET28	P40573	187 aa		4.91	□□□□□ -1.62
DBF4	YDR052C	LCB2	P40970	561 aa		4.91	□□□□□ -1.62
DBF4	YDR052C	ASN2	P49090	572 aa	Known RBP	4.91	□□□□□ -1.62
DBF4	YDR052C	PHO23	P50947	330 aa		4.91	□□□□□ -1.62
DBF4	YDR052C	ROG1	P53118	685 aa		4.91	□□□□□ -1.62
DBF4	YDR052C	YGR017W	P53210	297 aa		4.91	□□□□□ -1.62
DBF4	YDR052C	YPL067C	Q02754	198 aa		4.91	□□□□□ -1.62
DBF4	YDR052C	UGO1	Q03327	502 aa		4.91	□□□□□ -1.62
DBF4	YDR052C	YMR155W	Q03795	547 aa		4.91	□□□□□ -1.62
DBF4	YDR052C	NAT4	Q04751	285 aa		4.91	□□□□□ -1.62
DBF4	YDR052C	YMR034C	Q05131	434 aa	Predicted RBP	4.91	□□□□□ -1.62
DBF4	YDR052C	REX4	Q08237	289 aa		4.91	□□□□□ -1.62
DBF4	YDR052C	CSM4	Q08955	156 aa		4.91	□□□□□ -1.62
DBF4	YDR052C	YIL134C-A	Q45U18	67 aa		4.91	□□□□□ -1.62
DBF4	YDR052C	CDC7	P06243	507 aa		4.91	□□□□□ -1.62
DBF4	YDR052C	CDC34	P14682	295 aa		4.91	□□□□□ -1.62
DBF4	YDR052C	SLZ1	P40167	298 aa		4.91	□□□□□ -1.62
DBF4	YDR052C	PRM2	P40534	656 aa		4.91	□□□□□ -1.62
DBF4	YDR052C	OPT1	P40897	799 aa		4.91	□□□□□ -1.62
DBF4	YDR052C	ALK1	P43633	760 aa	Known RBP	4.91	□□□□□ -1.62
DBF4	YDR052C	ALT2	P52892	507 aa		4.91	□□□□□ -1.62
DBF4	YDR052C	STR3	P53101	465 aa	Known RBP	4.91	□□□□□ -1.62
DBF4	YDR052C	MPC1	P53157	130 aa	Known RBP	4.91	□□□□□ -1.62
DBF4	YDR052C	MEP3	P53390	489 aa		4.91	□□□□□ -1.62
DBF4	YDR052C	BRE5	P53741	515 aa	Known RBP	4.91	□□□□□ -1.62
DBF4	YDR052C	YNL181W	P53878	407 aa		4.91	□□□□□ -1.62
DBF4	YDR052C	RHO4	Q00246	291 aa		4.91	□□□□□ -1.62
DBF4	YDR052C	TOF2	Q02208	771 aa		4.91	□□□□□ -1.62
DBF4	YDR052C	YLR455W	Q06188	304 aa		4.91	□□□□□ -1.62
DBF4	YDR052C	RRT8	Q08219	342 aa		4.91	□□□□□ -1.62
DBF4	YDR052C	MRX4	Q12467	430 aa		4.91	□□□□□ -1.62
DBF4	YDR052C	PSF1	Q12488	208 aa		4.91	□□□□□ -1.62
DBF4	YDR052C	CBP1	P07252	654 aa		4.9	□□□□□ -1.62
DBF4	YDR052C	PRE9	P23638	258 aa	Known RBP	4.9	□□□□□ -1.62
DBF4	YDR052C	PET18	P25362	215 aa		4.9	□□□□□ -1.62
DBF4	YDR052C	YCR061W	P25639	631 aa		4.9	□□□□□ -1.62
DBF4	YDR052C	BCS1	P32839	456 aa		4.9	□□□□□ -1.62
DBF4	YDR052C	MOT2	P34909	587 aa	Known RBP	4.9	□□□□□ -1.62
DBF4	YDR052C	RRN10	P38204	145 aa		4.9	□□□□□ -1.62
DBF4	YDR052C	GAB1	P41733	394 aa		4.9	□□□□□ -1.62
DBF4	YDR052C	YAR1	P46683	200 aa		4.9	□□□□□ -1.62
DBF4	YDR052C	YJR011C	P47086	261 aa	Predicted RBP	4.9	□□□□□ -1.62
DBF4	YDR052C	BNA1	P47096	177 aa		4.9	□□□□□ -1.62
DBF4	YDR052C	PUS4	P48567	403 aa	Known RBP	4.9	□□□□□ -1.62
DBF4	YDR052C	AIF1	P52923	378 aa		4.9	□□□□□ -1.62
DBF4	YDR052C	RPN14	P53196	417 aa		4.9	□□□□□ -1.62
DBF4	YDR052C	PEX31	P53203	462 aa		4.9	□□□□□ -1.62
DBF4	YDR052C	HRD1	Q08109	551 aa		4.9	□□□□□ -1.62
DBF4	YDR052C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.62	not detected
DBF4	YDR052C	TFC7	Q12415	435 aa		4.9	□□□□□ -1.62
DBF4	YDR052C	RMD5	Q12508	421 aa		4.9	□□□□□ -1.62
DBF4	YDR052C	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.9	□□□□□ -1.62
DBF4	YDR052C	UBR2	Q07963	1872 aa		4.9	□□□□□ -1.63
DBF4	YDR052C	THP2	O13539	261 aa	Known RBP	4.9	□□□□□ -1.63
DBF4	YDR052C	ATP5	P09457	212 aa		4.9	□□□□□ -1.63
DBF4	YDR052C	YOL163W	P0CF20	169 aa		4.9	□□□□□ -1.63
DBF4	YDR052C	DDI2	P0CH63	225 aa		4.9	□□□□□ -1.63
DBF4	YDR052C	DDI3	P0CH64	225 aa		4.9	□□□□□ -1.63
DBF4	YDR052C	ARG8	P18544	423 aa		4.9	□□□□□ -1.63
DBF4	YDR052C	ELO2	P25358	347 aa		4.9	□□□□□ -1.63
DBF4	YDR052C	NTH1	P32356	751 aa		4.9	□□□□□ -1.63
DBF4	YDR052C	SFC1	P33303	322 aa		4.9	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 34.9 ms