RNA–Protein interactions for RNA: YCL054W

SPB1, Transcript of AdoMet-dependent methyltransferase, yeastyeast

Gene SPB1, Length 2,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB1YCL054W SSQ1Q05931 657 aaPredicted RBP2.43□□□□□ -2.02
SPB1YCL054W BCP1Q06338 283 aa2.43□□□□□ -2.02
SPB1YCL054W ATX2Q12067 313 aa2.43□□□□□ -2.02
SPB1YCL054W CRC1Q12289 327 aa2.43□□□□□ -2.02
SPB1YCL054W YRM1Q12340 786 aa2.43□□□□□ -2.02
SPB1YCL054W HEM2P05373 342 aa2.42□□□□□ -2.02
SPB1YCL054W SSA3P09435 649 aaKnown RBP2.42□□□□□ -2.02
SPB1YCL054W MRS3P10566 314 aa2.42□□□□□ -2.02
SPB1YCL054W RSR1P13856 272 aa2.42□□□□□ -2.02
SPB1YCL054W FRS2P15625 503 aaKnown RBP2.42□□□□□ -2.02
SPB1YCL054W YCR100CP25606 316 aa2.42□□□□□ -2.02
SPB1YCL054W ARO4P32449 370 aaKnown RBP2.42□□□□□ -2.02
SPB1YCL054W LOS1P33418 1100 aaPredicted RBP2.42□□□□□ -2.02
SPB1YCL054W PRX1P34227 261 aaKnown RBP2.42□□□□□ -2.02
SPB1YCL054W CBP4P37267 147 aa2.42□□□□□ -2.02
SPB1YCL054W PRP39P39682 629 aaKnown RBP2.42□□□□□ -2.02
SPB1YCL054W YER085CP40058 173 aa2.42□□□□□ -2.02
SPB1YCL054W ATM1P40416 690 aa2.42□□□□□ -2.02
SPB1YCL054W FIS1P40515 155 aa2.42□□□□□ -2.02
SPB1YCL054W SNO3P43544 222 aa2.42□□□□□ -2.02
SPB1YCL054W OTU1P43558 301 aa2.42□□□□□ -2.02
SPB1YCL054W GWT1P47026 490 aa2.42□□□□□ -2.02
SPB1YCL054W HSH155P49955 971 aaKnown RBP2.42□□□□□ -2.02
SPB1YCL054W MND1P53102 219 aa2.42□□□□□ -2.02
SPB1YCL054W YNL234WP53857 426 aa2.42□□□□□ -2.02
SPB1YCL054W TDA7P53882 636 aaPredicted RBP2.42□□□□□ -2.02
SPB1YCL054W BET4Q00618 327 aa2.42□□□□□ -2.02
SPB1YCL054W YMR310CQ04867 317 aaPredicted RBP2.42□□□□□ -2.02
SPB1YCL054W MRPL51Q06090 140 aaPredicted RBP2.42□□□□□ -2.02
SPB1YCL054W RRG8Q06109 277 aa2.42□□□□□ -2.02
SPB1YCL054W LDS2Q08218 356 aa2.42□□□□□ -2.02
SPB1YCL054W FSH3Q99369 266 aa2.42□□□□□ -2.02
SPB1YCL054W MSF1P08425 469 aa2.42□□□□□ -2.02
SPB1YCL054W FAR1P21268 830 aa2.42□□□□□ -2.02
SPB1YCL054W VAM7P32912 316 aa2.42□□□□□ -2.02
SPB1YCL054W CBF5P33322 483 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
SPB1YCL054W KKQ8P36004 724 aa2.42□□□□□ -2.02
SPB1YCL054W YBR137WP38276 179 aa2.42□□□□□ -2.02
SPB1YCL054W SBE22P38814 852 aa2.42□□□□□ -2.02
SPB1YCL054W SHQ1P40486 507 aaPredicted RBP2.42□□□□□ -2.02
SPB1YCL054W YHC3P47040 408 aa2.42□□□□□ -2.02
SPB1YCL054W YGL114WP53134 725 aa2.42□□□□□ -2.02
SPB1YCL054W YNL181WP53878 407 aa2.42□□□□□ -2.02
SPB1YCL054W IRC15Q02733 499 aa2.42□□□□□ -2.02
SPB1YCL054W RPM2Q02773 1202 aa2.42□□□□□ -2.02
SPB1YCL054W ODC1Q03028 310 aa2.42□□□□□ -2.02
SPB1YCL054W ECI1Q05871 280 aa2.42□□□□□ -2.02
SPB1YCL054W TSR1Q07381 788 aaKnown RBP2.42□□□□□ -2.02
SPB1YCL054W YPL150WQ12152 901 aa2.42□□□□□ -2.02
SPB1YCL054W RIF1P29539 1916 aa2.41□□□□□ -2.02
SPB1YCL054W RPL18AP0CX49 186 aaKnown RBP2.41□□□□□ -2.02
SPB1YCL054W RPL18BP0CX50 186 aaKnown RBP2.41□□□□□ -2.02
SPB1YCL054W MXR2P25566 168 aa2.41□□□□□ -2.02
SPB1YCL054W ATS1P31386 333 aa2.41□□□□□ -2.02
SPB1YCL054W SUA5P32579 426 aa2.41□□□□□ -2.02
SPB1YCL054W RAD23P32628 398 aaKnown RBP2.41□□□□□ -2.02
SPB1YCL054W UTP18P40362 594 aaPredicted RBP2.41□□□□□ -2.02
SPB1YCL054W TOS3P43637 560 aa2.41□□□□□ -2.02
SPB1YCL054W RTC4P53850 401 aa2.41□□□□□ -2.02
SPB1YCL054W YMR254CQ04838 102 aa2.41□□□□□ -2.02
SPB1YCL054W YOR338WQ99326 363 aa2.41□□□□□ -2.02
SPB1YCL054W SEN1Q00416 2231 aaKnown RBP2.41□□□□□ -2.02
SPB1YCL054W CDC36P06100 191 aaPredicted RBP2.41□□□□□ -2.02
SPB1YCL054W UTR1P21373 530 aa2.41□□□□□ -2.02
SPB1YCL054W RNA14P25298 677 aaKnown RBP2.41□□□□□ -2.02
SPB1YCL054W TIP1P27654 210 aaPredicted RBP2.41□□□□□ -2.02
SPB1YCL054W YMR134WP40207 237 aa2.41□□□□□ -2.02
SPB1YCL054W HAM1P47119 197 aaKnown RBP2.41□□□□□ -2.02
SPB1YCL054W AVT4P50944 713 aa2.41□□□□□ -2.02
SPB1YCL054W PET117Q02771 107 aa2.41□□□□□ -2.02
SPB1YCL054W ATC1Q04005 294 aa2.41□□□□□ -2.02
SPB1YCL054W RTN1Q04947 295 aaKnown RBP2.41□□□□□ -2.02
SPB1YCL054W YAP7Q08182 245 aa2.41□□□□□ -2.02
SPB1YCL054W ATG31Q12421 196 aa2.41□□□□□ -2.02
SPB1YCL054W DCP1Q12517 231 aaPredicted RBP2.41□□□□□ -2.02
SPB1YCL054W YDR034W-BQ6Q5X2 51 aa2.41□□□□□ -2.02
SPB1YCL054W IRA2P19158 3079 aa2.41□□□□□ -2.02
SPB1YCL054W STE2D6VTK4 431 aa2.4□□□□□ -2.02
SPB1YCL054W RAD1P06777 1100 aa2.4□□□□□ -2.02
SPB1YCL054W SSC1P0CS90 654 aaKnown RBP2.4□□□□□ -2.02
SPB1YCL054W TCP1P12612 559 aaKnown RBP2.4□□□□□ -2.02
SPB1YCL054W APA2P22108 325 aa2.4□□□□□ -2.02
SPB1YCL054W RVS161P25343 265 aaKnown RBP2.4□□□□□ -2.02
SPB1YCL054W GLC7P32598 312 aaKnown RBP2.4□□□□□ -2.02
SPB1YCL054W IMP3P32899 183 aaPredicted RBP2.4□□□□□ -2.02
SPB1YCL054W YKL162CP36052 402 aa2.4□□□□□ -2.02
SPB1YCL054W RIM2P38127 377 aa2.4□□□□□ -2.02
SPB1YCL054W IML3P38265 245 aa2.4□□□□□ -2.02
SPB1YCL054W ATG7P38862 630 aa2.4□□□□□ -2.02
SPB1YCL054W END3P39013 349 aa2.4□□□□□ -2.02
SPB1YCL054W MST28P39552 234 aa2.4□□□□□ -2.02
SPB1YCL054W LYS12P40495 371 aaKnown RBP2.4□□□□□ -2.02
SPB1YCL054W FMP33P46998 180 aa2.4□□□□□ -2.02
SPB1YCL054W FUS2Q05670 677 aa2.4□□□□□ -2.02
SPB1YCL054W SGT1Q08446 395 aa2.4□□□□□ -2.02
SPB1YCL054W RRP12Q12754 1228 aaKnown RBP2.4□□□□□ -2.02
SPB1YCL054W ARF1P11076 181 aaKnown RBP2.4□□□□□ -2.03
SPB1YCL054W FUS3P16892 353 aaKnown RBP2.4□□□□□ -2.03
SPB1YCL054W GLN3P18494 730 aa2.4□□□□□ -2.03
SPB1YCL054W DAL2P25335 343 aa2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 25.8 ms