RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W LOT5P34234 306 aa5.16□□□□□ -1.58
SHM1YBR263W TEF4P36008 412 aaKnown RBP5.16□□□□□ -1.58
SHM1YBR263W MDV1P47025 714 aa5.16□□□□□ -1.58
SHM1YBR263W TOS2P50078 622 aa5.16□□□□□ -1.58
SHM1YBR263W SEH1P53011 349 aaKnown RBP5.16□□□□□ -1.58
SHM1YBR263W TWF1P53250 332 aa5.16□□□□□ -1.58
SHM1YBR263W ASI2P53895 289 aa5.16□□□□□ -1.58
SHM1YBR263W SWP1Q02795 286 aa5.16□□□□□ -1.58
SHM1YBR263W RRN5Q02983 363 aa5.16□□□□□ -1.58
SHM1YBR263W YDR541CQ03049 344 aa5.16□□□□□ -1.58
SHM1YBR263W KRE28Q04431 385 aa5.16□□□□□ -1.58
SHM1YBR263W SWA2Q06677 668 aa5.16□□□□□ -1.58
SHM1YBR263W YOR342CQ12182 319 aa5.16□□□□□ -1.58
SHM1YBR263W YRM1Q12340 786 aa5.16□□□□□ -1.58
SHM1YBR263W YOL159C-AQ3E769 90 aa5.16□□□□□ -1.58
SHM1YBR263W TRA1P38811 3744 aa5.16□□□□□ -1.58
SHM1YBR263W RER1P25560 188 aa5.15□□□□□ -1.58
SHM1YBR263W PBN1P25580 416 aa5.15□□□□□ -1.58
SHM1YBR263W IDH1P28834 360 aaKnown RBP RIP-Chip data5.15□□□□□ -1.58not detected
SHM1YBR263W RPN2P32565 945 aaKnown RBP5.15□□□□□ -1.58
SHM1YBR263W SPC34P36131 295 aa5.15□□□□□ -1.58
SHM1YBR263W EXO84P38261 753 aa5.15□□□□□ -1.58
SHM1YBR263W GID8P40208 455 aa5.15□□□□□ -1.58
SHM1YBR263W MET28P40573 187 aa5.15□□□□□ -1.58
SHM1YBR263W SNM1P40993 198 aa5.15□□□□□ -1.58
SHM1YBR263W SMK1P41808 388 aa5.15□□□□□ -1.58
SHM1YBR263W BIT61P47041 543 aa5.15□□□□□ -1.58
SHM1YBR263W SYF2P53277 215 aaPredicted RBP5.15□□□□□ -1.58
SHM1YBR263W YLR460CP54007 376 aa5.15□□□□□ -1.58
SHM1YBR263W TIM11P81449 96 aaPredicted RBP5.15□□□□□ -1.58
SHM1YBR263W NCE101Q02820 53 aa5.15□□□□□ -1.58
SHM1YBR263W YDR239CQ03780 787 aa5.15□□□□□ -1.58
SHM1YBR263W NUP53Q03790 475 aa5.15□□□□□ -1.58
SHM1YBR263W RNH202Q05635 350 aa5.15□□□□□ -1.58
SHM1YBR263W YPS7Q06325 596 aa5.15□□□□□ -1.58
SHM1YBR263W RRP9Q06506 573 aaKnown RBP5.15□□□□□ -1.58
SHM1YBR263W YOR376WQ08900 122 aa5.15□□□□□ -1.58
SHM1YBR263W PRP46Q12417 451 aaPredicted RBP5.15□□□□□ -1.58
SHM1YBR263W PRP8P33334 2413 aaKnown RBP5.14□□□□□ -1.59
SHM1YBR263W KSS1P14681 368 aa5.14□□□□□ -1.59
SHM1YBR263W SEC62P21825 274 aa5.14□□□□□ -1.59
SHM1YBR263W NAM9P27929 486 aa5.14□□□□□ -1.59
SHM1YBR263W APE2P32454 952 aaKnown RBP5.14□□□□□ -1.59
SHM1YBR263W HIR2P32480 875 aa5.14□□□□□ -1.59
SHM1YBR263W EMP70P32802 667 aa5.14□□□□□ -1.59
SHM1YBR263W HCS1P34243 683 aa5.14□□□□□ -1.59
SHM1YBR263W SLM4P38247 162 aa5.14□□□□□ -1.59
SHM1YBR263W OM14P38325 134 aa5.14□□□□□ -1.59
SHM1YBR263W ECM34P38728 170 aa5.14□□□□□ -1.59
SHM1YBR263W SER3P40054 469 aa5.14□□□□□ -1.59
SHM1YBR263W CIN1P40987 1014 aa5.14□□□□□ -1.59
SHM1YBR263W CAK1P43568 368 aaPredicted RBP5.14□□□□□ -1.59
SHM1YBR263W MPC1P53157 130 aaKnown RBP5.14□□□□□ -1.59
SHM1YBR263W DCP2P53550 970 aaKnown RBP5.14□□□□□ -1.59
SHM1YBR263W DBP6P53734 629 aaKnown RBP5.14□□□□□ -1.59
SHM1YBR263W TPS1Q00764 495 aaKnown RBP5.14□□□□□ -1.59
SHM1YBR263W YPL107WQ02873 248 aa5.14□□□□□ -1.59
SHM1YBR263W ATG21Q02887 496 aa5.14□□□□□ -1.59
SHM1YBR263W PAL1Q05518 499 aaKnown RBP5.14□□□□□ -1.59
SHM1YBR263W MEU1Q07938 337 aaKnown RBP RIP-Chip data5.14□□□□□ -1.59not detected
SHM1YBR263W YDL211CQ12121 372 aa5.14□□□□□ -1.59
SHM1YBR263W MSL5Q12186 476 aaKnown RBP RIP-Chip data5.14□□□□□ -1.59not detected
SHM1YBR263W MRX4Q12467 430 aa5.14□□□□□ -1.59
SHM1YBR263W NKP1Q12493 238 aa5.14□□□□□ -1.59
SHM1YBR263W GPH1P06738 902 aaKnown RBP5.13□□□□□ -1.59
SHM1YBR263W PET9P18239 318 aaKnown RBP5.13□□□□□ -1.59
SHM1YBR263W KGD1P20967 1014 aaKnown RBP5.13□□□□□ -1.59
SHM1YBR263W CLB4P24871 460 aa5.13□□□□□ -1.59
SHM1YBR263W POL4P25615 582 aa5.13□□□□□ -1.59
SHM1YBR263W NUF2P33895 451 aa5.13□□□□□ -1.59
SHM1YBR263W CHS7P38843 316 aa5.13□□□□□ -1.59
SHM1YBR263W PET100P38958 111 aa5.13□□□□□ -1.59
SHM1YBR263W RCY1P39531 840 aa5.13□□□□□ -1.59
SHM1YBR263W ECM1P39715 212 aa5.13□□□□□ -1.59
SHM1YBR263W YNL195CP40168 261 aa5.13□□□□□ -1.59
SHM1YBR263W SHR5P41912 237 aa5.13□□□□□ -1.59
SHM1YBR263W NUP57P48837 541 aa5.13□□□□□ -1.59
SHM1YBR263W IMD4P50094 524 aaKnown RBP5.13□□□□□ -1.59
SHM1YBR263W YPL068CQ02749 293 aa5.13□□□□□ -1.59
SHM1YBR263W SEI1Q06058 285 aa5.13□□□□□ -1.59
SHM1YBR263W ARV1Q06541 321 aa5.13□□□□□ -1.59
SHM1YBR263W VPS36Q06696 566 aa5.13□□□□□ -1.59
SHM1YBR263W YOL024WQ08172 172 aa5.13□□□□□ -1.59
SHM1YBR263W NOP12Q08208 459 aaKnown RBP5.13□□□□□ -1.59
SHM1YBR263W SUI3P09064 285 aaKnown RBP5.13□□□□□ -1.59
SHM1YBR263W RPL11AP0C0W9 174 aaKnown RBP5.13□□□□□ -1.59
SHM1YBR263W YOL163WP0CF20 169 aa5.13□□□□□ -1.59
SHM1YBR263W ARF1P11076 181 aaKnown RBP5.13□□□□□ -1.59
SHM1YBR263W DBP2P24783 546 aaKnown RBP5.13□□□□□ -1.59
SHM1YBR263W YCR102CP25608 368 aa5.13□□□□□ -1.59
SHM1YBR263W UBC8P28263 218 aa5.13□□□□□ -1.59
SHM1YBR263W SAC1P32368 623 aaKnown RBP5.13□□□□□ -1.59
SHM1YBR263W HSP150P32478 413 aa5.13□□□□□ -1.59
SHM1YBR263W MRPL6P32904 214 aa5.13□□□□□ -1.59
SHM1YBR263W YPT7P32939 208 aa5.13□□□□□ -1.59
SHM1YBR263W SNU114P36048 1008 aaKnown RBP5.13□□□□□ -1.59
SHM1YBR263W YIL067CP40514 678 aa5.13□□□□□ -1.59
SHM1YBR263W SNL1P40548 159 aa5.13□□□□□ -1.59
SHM1YBR263W IRC6P43615 237 aa5.13□□□□□ -1.59
SHM1YBR263W MEP3P53390 489 aa5.13□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms