RNA–Protein interactions for RNA: YBR170C

NPL4, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene NPL4, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NPL4YBR170C YAR1P46683 200 aa3.82□□□□□ -1.8
NPL4YBR170C YJL118WP47022 219 aa3.82□□□□□ -1.8
NPL4YBR170C KEL2P50090 882 aa3.82□□□□□ -1.8
NPL4YBR170C WSC2P53832 503 aa3.82□□□□□ -1.8
NPL4YBR170C PET117Q02771 107 aa3.82□□□□□ -1.8
NPL4YBR170C SRL4Q03085 281 aa3.82□□□□□ -1.8
NPL4YBR170C CTS2Q06350 511 aa3.82□□□□□ -1.8
NPL4YBR170C LOT6Q07923 191 aa3.82□□□□□ -1.8
NPL4YBR170C RGT2Q12300 763 aa3.82□□□□□ -1.8
NPL4YBR170C COX2P00410 251 aa3.81□□□□□ -1.8
NPL4YBR170C PIS1P06197 220 aaKnown RBP3.81□□□□□ -1.8
NPL4YBR170C PET123P17558 318 aa3.81□□□□□ -1.8
NPL4YBR170C CDC42P19073 191 aa3.81□□□□□ -1.8
NPL4YBR170C MCK1P21965 375 aaKnown RBP3.81□□□□□ -1.8
NPL4YBR170C ITR2P30606 609 aa3.81□□□□□ -1.8
NPL4YBR170C AGA1P32323 725 aa3.81□□□□□ -1.8
NPL4YBR170C GCG1P32656 232 aaKnown RBP3.81□□□□□ -1.8
NPL4YBR170C SKG6P32900 734 aaPredicted RBP3.81□□□□□ -1.8
NPL4YBR170C PRM9P39551 298 aa3.81□□□□□ -1.8
NPL4YBR170C YIL029CP40538 142 aa3.81□□□□□ -1.8
NPL4YBR170C GCN20P43535 752 aaKnown RBP3.81□□□□□ -1.8
NPL4YBR170C AGP3P43548 558 aa3.81□□□□□ -1.8
NPL4YBR170C NCA3P46955 337 aa3.81□□□□□ -1.8
NPL4YBR170C MRX5P47007 382 aa3.81□□□□□ -1.8
NPL4YBR170C LCB3P47013 409 aa3.81□□□□□ -1.8
NPL4YBR170C KAP114P53067 1004 aa3.81□□□□□ -1.8
NPL4YBR170C LSG1P53145 640 aaKnown RBP3.81□□□□□ -1.8
NPL4YBR170C TIM21P53220 239 aa3.81□□□□□ -1.8
NPL4YBR170C MNT4P53745 580 aa3.81□□□□□ -1.8
NPL4YBR170C NUP116Q02630 1113 aa3.81□□□□□ -1.8
NPL4YBR170C TDA1Q03533 586 aa3.81□□□□□ -1.8
NPL4YBR170C PRM6Q04705 352 aa3.81□□□□□ -1.8
NPL4YBR170C EAF3Q12432 401 aa3.81□□□□□ -1.8
NPL4YBR170C SSK22P25390 1331 aaPredicted RBP3.81□□□□□ -1.8
NPL4YBR170C ARO4P32449 370 aaKnown RBP3.81□□□□□ -1.8
NPL4YBR170C MSN4P33749 630 aa3.81□□□□□ -1.8
NPL4YBR170C SWD2P36104 329 aaPredicted RBP3.81□□□□□ -1.8
NPL4YBR170C AVT5P38176 459 aa3.81□□□□□ -1.8
NPL4YBR170C BNA6P43619 295 aa3.81□□□□□ -1.8
NPL4YBR170C MSO1P53604 210 aaKnown RBP3.81□□□□□ -1.8
NPL4YBR170C SED5Q01590 340 aa3.81□□□□□ -1.8
NPL4YBR170C IRC4Q03036 179 aa3.81□□□□□ -1.8
NPL4YBR170C GMC2Q06201 188 aa3.81□□□□□ -1.8
NPL4YBR170C BER1Q06688 274 aaKnown RBP3.81□□□□□ -1.8
NPL4YBR170C BTS1Q12051 335 aa3.81□□□□□ -1.8
NPL4YBR170C APC9Q12107 265 aa3.81□□□□□ -1.8
NPL4YBR170C PCL9Q12477 304 aa3.81□□□□□ -1.8
NPL4YBR170C SAL1D6W196 494 aa3.8□□□□□ -1.8
NPL4YBR170C TRP1P00912 224 aa3.8□□□□□ -1.8
NPL4YBR170C YSR3P23501 404 aa3.8□□□□□ -1.8
NPL4YBR170C RVS161P25343 265 aaKnown RBP3.8□□□□□ -1.8
NPL4YBR170C CWP1P28319 239 aa3.8□□□□□ -1.8
NPL4YBR170C KAR9P32526 644 aa3.8□□□□□ -1.8
NPL4YBR170C PRS1P32895 427 aaKnown RBP3.8□□□□□ -1.8
NPL4YBR170C SPO23P33757 523 aa3.8□□□□□ -1.8
NPL4YBR170C SAD1P43589 448 aa3.8□□□□□ -1.8
NPL4YBR170C MTM1P53320 366 aa3.8□□□□□ -1.8
NPL4YBR170C BSC6Q08280 497 aa3.8□□□□□ -1.8
NPL4YBR170C ADH2P00331 348 aaKnown RBP3.79□□□□□ -1.8
NPL4YBR170C ATP6P00854 259 aa3.79□□□□□ -1.8
NPL4YBR170C CHA1P25379 360 aaKnown RBP3.79□□□□□ -1.8
NPL4YBR170C RPL16AP26784 199 aaKnown RBP3.79□□□□□ -1.8
NPL4YBR170C ZRT1P32804 376 aa3.79□□□□□ -1.8
NPL4YBR170C YKT6P36015 200 aaKnown RBP3.79□□□□□ -1.8
NPL4YBR170C ECM8P38246 354 aa3.79□□□□□ -1.8
NPL4YBR170C PRM5P40476 318 aa3.79□□□□□ -1.8
NPL4YBR170C YJL213WP40896 331 aa3.79□□□□□ -1.8
NPL4YBR170C YGR210CP42942 411 aa3.79□□□□□ -1.8
NPL4YBR170C YFL067WP43537 175 aa3.79□□□□□ -1.8
NPL4YBR170C CIN2P46670 268 aa3.79□□□□□ -1.8
NPL4YBR170C SMC5Q08204 1093 aa3.79□□□□□ -1.8
NPL4YBR170C FCY22Q12119 530 aa3.79□□□□□ -1.8
NPL4YBR170C RPN6Q12377 434 aa3.79□□□□□ -1.8
NPL4YBR170C ERP3Q12403 225 aa3.79□□□□□ -1.8
NPL4YBR170C MEI5P32489 222 aa3.78□□□□□ -1.8
NPL4YBR170C YHR035WP38769 630 aa3.78□□□□□ -1.8
NPL4YBR170C MDM31P38880 579 aa3.78□□□□□ -1.8
NPL4YBR170C YER085CP40058 173 aa3.78□□□□□ -1.8
NPL4YBR170C FMC1P40491 155 aa3.78□□□□□ -1.8
NPL4YBR170C DFG10P40526 253 aa3.78□□□□□ -1.8
NPL4YBR170C YPR091CQ06833 770 aa3.78□□□□□ -1.8
NPL4YBR170C YDL114WQ07530 308 aa3.78□□□□□ -1.8
NPL4YBR170C HNT3Q08702 217 aa3.78□□□□□ -1.8
NPL4YBR170C SLM3Q12093 417 aa3.78□□□□□ -1.8
NPL4YBR170C YGK3Q12222 375 aaPredicted RBP3.78□□□□□ -1.8
NPL4YBR170C ATG31Q12421 196 aa3.78□□□□□ -1.8
NPL4YBR170C HPR1P17629 752 aaKnown RBP3.78□□□□□ -1.8
NPL4YBR170C RPB4P20433 221 aaPredicted RBP3.78□□□□□ -1.8
NPL4YBR170C FUN26P31381 517 aa3.78□□□□□ -1.8
NPL4YBR170C DOA4P32571 926 aa3.78□□□□□ -1.8
NPL4YBR170C MAM33P40513 266 aa3.78□□□□□ -1.8
NPL4YBR170C YNL320WP42840 284 aa3.78□□□□□ -1.8
NPL4YBR170C WWM1P43582 211 aaKnown RBP3.78□□□□□ -1.8
NPL4YBR170C YMR209CQ03648 457 aa3.78□□□□□ -1.8
NPL4YBR170C YMR027WQ04371 470 aa3.78□□□□□ -1.8
NPL4YBR170C CMS1Q07897 291 aaKnown RBP3.78□□□□□ -1.8
NPL4YBR170C DDC1Q08949 612 aa3.78□□□□□ -1.8
NPL4YBR170C TMS1Q12116 473 aa3.78□□□□□ -1.8
NPL4YBR170C HTZ1Q12692 134 aaKnown RBP3.78□□□□□ -1.8
NPL4YBR170C RAD3P06839 778 aa3.77□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 37.5 ms