RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 CLP1Q92989 425 aaKnown RBP10.59□□□□□ -0.71
NPLOC4-210ENST00000572824 HINFPQ9BQA5 517 aa10.59□□□□□ -0.71
NPLOC4-210ENST00000572824 TRAIPQ9BWF2 469 aa10.59□□□□□ -0.71
NPLOC4-210ENST00000572824 MYH9P35579 1960 aaKnown RBP10.59□□□□□ -0.71
NPLOC4-210ENST00000572824 FNDC1Q4ZHG4 1894 aaPredicted RBP10.58□□□□□ -0.72
NPLOC4-210ENST00000572824 ABHD14A-ACY1A0A1B0GW23 586 aa10.58□□□□□ -0.72
NPLOC4-210ENST00000572824 A6NJY4 79 aa10.58□□□□□ -0.72
NPLOC4-210ENST00000572824 LINC00271P0C7V0 271 aa10.58□□□□□ -0.72
NPLOC4-210ENST00000572824 ARP10275 920 aa10.58□□□□□ -0.72
NPLOC4-210ENST00000572824 TGFB3P10600 412 aa10.58□□□□□ -0.72
NPLOC4-210ENST00000572824 CTSOP43234 321 aaPredicted RBP10.58□□□□□ -0.72
NPLOC4-210ENST00000572824 ERVK-21P61565 698 aa10.58□□□□□ -0.72
NPLOC4-210ENST00000572824 IGBP1P78318 339 aa10.58□□□□□ -0.72
NPLOC4-210ENST00000572824 TMEM62Q0P6H9 643 aa10.58□□□□□ -0.72
NPLOC4-210ENST00000572824 ITGB3BPQ13352 177 aaPredicted RBP10.58□□□□□ -0.72
NPLOC4-210ENST00000572824 IKBKEQ14164 716 aa10.58□□□□□ -0.72
NPLOC4-210ENST00000572824 APOA5Q6Q788 366 aa10.58□□□□□ -0.72
NPLOC4-210ENST00000572824 FANCBQ8NB91 859 aa10.58□□□□□ -0.72
NPLOC4-210ENST00000572824 MAP3K20Q9NYL2 800 aaKnown RBP10.58□□□□□ -0.72
NPLOC4-210ENST00000572824 SEC63Q9UGP8 760 aaKnown RBP10.58□□□□□ -0.72
NPLOC4-210ENST00000572824 PCDHA6Q9UN73 950 aa10.58□□□□□ -0.72
NPLOC4-210ENST00000572824 PCDHA8Q9Y5H6 950 aa10.58□□□□□ -0.72
NPLOC4-210ENST00000572824 UBIAD1Q9Y5Z9 338 aa10.58□□□□□ -0.72
NPLOC4-210ENST00000572824 KIF28PB7ZC32 967 aa10.57□□□□□ -0.72
NPLOC4-210ENST00000572824 DDX39AO00148 427 aaKnown RBP10.57□□□□□ -0.72
NPLOC4-210ENST00000572824 STXBP3O00186 592 aa10.57□□□□□ -0.72
NPLOC4-210ENST00000572824 PDIA4P13667 645 aaKnown RBP10.57□□□□□ -0.72
NPLOC4-210ENST00000572824 POU3F3P20264 500 aaPredicted RBP10.57□□□□□ -0.72
NPLOC4-210ENST00000572824 KIF5BP33176 963 aa10.57□□□□□ -0.72
NPLOC4-210ENST00000572824 GATMP50440 423 aa10.57□□□□□ -0.72
NPLOC4-210ENST00000572824 RNF144AP50876 292 aaPredicted RBP10.57□□□□□ -0.72
NPLOC4-210ENST00000572824 HTRA4P83105 476 aaPredicted RBP10.57□□□□□ -0.72
NPLOC4-210ENST00000572824 EXOSC10Q01780 885 aaKnown RBP10.57□□□□□ -0.72
NPLOC4-210ENST00000572824 MGAT3Q09327 533 aa10.57□□□□□ -0.72
NPLOC4-210ENST00000572824 PPFIA1Q13136 1202 aa10.57□□□□□ -0.72
NPLOC4-210ENST00000572824 NEDD9Q14511 834 aa10.57□□□□□ -0.72
NPLOC4-210ENST00000572824 LPIN1Q14693 890 aa10.57□□□□□ -0.72
NPLOC4-210ENST00000572824 TLR1Q15399 786 aa10.57□□□□□ -0.72
NPLOC4-210ENST00000572824 GNPTABQ3T906 1256 aa10.57□□□□□ -0.72
NPLOC4-210ENST00000572824 KCNV1Q6PIU1 500 aa10.57□□□□□ -0.72
NPLOC4-210ENST00000572824 DNAJB3Q8WWF6 145 aa10.57□□□□□ -0.72
NPLOC4-210ENST00000572824 TMEM87BQ96K49 555 aa10.57□□□□□ -0.72
NPLOC4-210ENST00000572824 MAP3K14Q99558 947 aa10.57□□□□□ -0.72
NPLOC4-210ENST00000572824 RAD9AQ99638 391 aa10.57□□□□□ -0.72
NPLOC4-210ENST00000572824 FAM49AQ9H0Q0 323 aaPredicted RBP10.57□□□□□ -0.72
NPLOC4-210ENST00000572824 PSTPIP2Q9H939 334 aa10.57□□□□□ -0.72
NPLOC4-210ENST00000572824 AGO3Q9H9G7 860 aaKnown RBP10.57□□□□□ -0.72
NPLOC4-210ENST00000572824 SCHIP1Q9P0W5 487 aaPredicted RBP10.57□□□□□ -0.72
NPLOC4-210ENST00000572824 DACH1Q9UI36 760 aa10.57□□□□□ -0.72
NPLOC4-210ENST00000572824 SLC12A7Q9Y666 1083 aa10.57□□□□□ -0.72
NPLOC4-210ENST00000572824 KLF18A0A0U1RQI7 1052 aa10.56□□□□□ -0.72
NPLOC4-210ENST00000572824 FAM86C2PA6NEL3 165 aa10.56□□□□□ -0.72
NPLOC4-210ENST00000572824 CCNE2O96020 404 aa10.56□□□□□ -0.72
NPLOC4-210ENST00000572824 IBSPP21815 317 aaPredicted RBP10.56□□□□□ -0.72
NPLOC4-210ENST00000572824 GPC1P35052 558 aa10.56□□□□□ -0.72
NPLOC4-210ENST00000572824 LIFRP42702 1097 aa10.56□□□□□ -0.72
NPLOC4-210ENST00000572824 APOBRQ0VD83 1088 aa10.56□□□□□ -0.72
NPLOC4-210ENST00000572824 MTMR1Q13613 665 aa10.56□□□□□ -0.72
NPLOC4-210ENST00000572824 GRIK4Q16099 956 aa10.56□□□□□ -0.72
NPLOC4-210ENST00000572824 FOXD4L5Q5VV16 416 aaPredicted RBP10.56□□□□□ -0.72
NPLOC4-210ENST00000572824 SGMS1Q86VZ5 419 aa10.56□□□□□ -0.72
NPLOC4-210ENST00000572824 SAMD3Q8N6K7 520 aa10.56□□□□□ -0.72
NPLOC4-210ENST00000572824 RASGRP4Q8TDF6 673 aa10.56□□□□□ -0.72
NPLOC4-210ENST00000572824 CUL5Q93034 780 aa10.56□□□□□ -0.72
NPLOC4-210ENST00000572824 GPRASP2Q96D09 838 aa10.56□□□□□ -0.72
NPLOC4-210ENST00000572824 ZFP42Q96MM3 310 aa10.56□□□□□ -0.72
NPLOC4-210ENST00000572824 TGS1Q96RS0 853 aaKnown RBP10.56□□□□□ -0.72
NPLOC4-210ENST00000572824 PPP1R16BQ96T49 567 aa10.56□□□□□ -0.72
NPLOC4-210ENST00000572824 USP26Q9BXU7 913 aa10.56□□□□□ -0.72
NPLOC4-210ENST00000572824 ANO3Q9BYT9 981 aa10.56□□□□□ -0.72
NPLOC4-210ENST00000572824 GRIP2Q9C0E4 1043 aa10.56□□□□□ -0.72
NPLOC4-210ENST00000572824 EPHX3Q9H6B9 360 aa10.56□□□□□ -0.72
NPLOC4-210ENST00000572824 RC3H2Q9HBD1 1191 aaKnown RBP10.56□□□□□ -0.72
NPLOC4-210ENST00000572824 POLMQ9NP87 494 aaPredicted RBP10.56□□□□□ -0.72
NPLOC4-210ENST00000572824 ATP13A2Q9NQ11 1180 aa10.56□□□□□ -0.72
NPLOC4-210ENST00000572824 GOLGA8AA7E2F4 631 aa10.55□□□□□ -0.72
NPLOC4-210ENST00000572824 GOLGA8BA8MQT2 603 aa10.55□□□□□ -0.72
NPLOC4-210ENST00000572824 H3BQ06 376 aaPredicted RBP10.55□□□□□ -0.72
NPLOC4-210ENST00000572824 CDK2AP1O14519 115 aa10.55□□□□□ -0.72
NPLOC4-210ENST00000572824 AMHP03971 560 aa10.55□□□□□ -0.72
NPLOC4-210ENST00000572824 IL9P15248 144 aa10.55□□□□□ -0.72
NPLOC4-210ENST00000572824 CD52P31358 61 aa10.55□□□□□ -0.72
NPLOC4-210ENST00000572824 GTF2F1P35269 517 aaKnown RBP eCLIP10.55□□□□□ -0.72
NPLOC4-210ENST00000572824 NAPAP54920 295 aa10.55□□□□□ -0.72
NPLOC4-210ENST00000572824 FOXK2Q01167 660 aa10.55□□□□□ -0.72
NPLOC4-210ENST00000572824 PLCB4Q15147 1175 aa10.55□□□□□ -0.72
NPLOC4-210ENST00000572824 RTN1Q16799 776 aa10.55□□□□□ -0.72
NPLOC4-210ENST00000572824 EPC2Q52LR7 807 aa10.55□□□□□ -0.72
NPLOC4-210ENST00000572824 BMP2KLQ5H9B9 411 aa10.55□□□□□ -0.72
NPLOC4-210ENST00000572824 JAKMIP3Q5VZ66 844 aa10.55□□□□□ -0.72
NPLOC4-210ENST00000572824 NLRX1Q86UT6 975 aa10.55□□□□□ -0.72
NPLOC4-210ENST00000572824 SEPT8Q92599 483 aa10.55□□□□□ -0.72
NPLOC4-210ENST00000572824 GJA10Q969M2 543 aa10.55□□□□□ -0.72
NPLOC4-210ENST00000572824 NEK1Q96PY6 1258 aa10.55□□□□□ -0.72
NPLOC4-210ENST00000572824 SENP7Q9BQF6 1050 aa10.55□□□□□ -0.72
NPLOC4-210ENST00000572824 IFIH1Q9BYX4 1025 aaKnown RBP10.55□□□□□ -0.72
NPLOC4-210ENST00000572824 C11orf16Q9NQ32 467 aa10.55□□□□□ -0.72
NPLOC4-210ENST00000572824 KCNH7Q9NS40 1196 aa10.55□□□□□ -0.72
NPLOC4-210ENST00000572824 TUBE1Q9UJT0 475 aa10.55□□□□□ -0.72
NPLOC4-210ENST00000572824 PCDHGC5Q9Y5F6 944 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms