RNA–Protein interactions for RNA: ENST00000520895.5

HDAC2-209, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-209ENST00000520895 TFIP11Q9UBB9 837 aaKnown RBP17.19■□□□□ 0.34
HDAC2-209ENST00000520895 RBAK-RBAKDNI3L0D1 243 aa17.18■□□□□ 0.34
HDAC2-209ENST00000520895 SOX1O00570 391 aaPredicted RBP17.18■□□□□ 0.34
HDAC2-209ENST00000520895 USO1O60763 962 aaKnown RBP17.18■□□□□ 0.34
HDAC2-209ENST00000520895 BRD1O95696 1058 aa17.18■□□□□ 0.34
HDAC2-209ENST00000520895 ATP2A2P16615 1042 aaKnown RBP17.18■□□□□ 0.34
HDAC2-209ENST00000520895 NASPP49321 788 aaPredicted RBP17.18■□□□□ 0.34
HDAC2-209ENST00000520895 WDR5P61964 334 aaKnown RBP17.18■□□□□ 0.34
HDAC2-209ENST00000520895 GRIN1Q05586 938 aa17.18■□□□□ 0.34
HDAC2-209ENST00000520895 TMEM40Q8WWA1 233 aa17.18■□□□□ 0.34
HDAC2-209ENST00000520895 PRPF31Q8WWY3 499 aaKnown RBP17.18■□□□□ 0.34
HDAC2-209ENST00000520895 NLRP4Q96MN2 994 aa17.18■□□□□ 0.34
HDAC2-209ENST00000520895 SLC9A7Q96T83 725 aa17.18■□□□□ 0.34
HDAC2-209ENST00000520895 GCOM2Q9BZD3 368 aaPredicted RBP17.18■□□□□ 0.34
HDAC2-209ENST00000520895 NT5C3AQ9H0P0 336 aa17.18■□□□□ 0.34
HDAC2-209ENST00000520895 BHMT2Q9H2M3 363 aa17.18■□□□□ 0.34
HDAC2-209ENST00000520895 ADAMTS10Q9H324 1103 aa17.18■□□□□ 0.34
HDAC2-209ENST00000520895 FBXO2Q9UK22 296 aaPredicted RBP17.18■□□□□ 0.34
HDAC2-209ENST00000520895 PADI3Q9ULW8 664 aa17.18■□□□□ 0.34
HDAC2-209ENST00000520895 NOC2LQ9Y3T9 749 aaKnown RBP17.18■□□□□ 0.34
HDAC2-209ENST00000520895 SRPRBQ9Y5M8 271 aaKnown RBP17.18■□□□□ 0.34
HDAC2-209ENST00000520895 COL4A3BPQ9Y5P4 624 aa17.18■□□□□ 0.34
HDAC2-209ENST00000520895 GRXCR1A8MXD5 290 aa17.17■□□□□ 0.34
HDAC2-209ENST00000520895 E9PMD0 336 aa17.17■□□□□ 0.34
HDAC2-209ENST00000520895 GPR182O15218 404 aa17.17■□□□□ 0.34
HDAC2-209ENST00000520895 SLC26A4O43511 780 aa17.17■□□□□ 0.34
HDAC2-209ENST00000520895 AMHP03971 560 aa17.17■□□□□ 0.34
HDAC2-209ENST00000520895 EIF4BP23588 611 aaKnown RBP17.17■□□□□ 0.34
HDAC2-209ENST00000520895 ANP32AP39687 249 aaKnown RBP17.17■□□□□ 0.34
HDAC2-209ENST00000520895 SMAD3P84022 425 aaKnown RBP17.17■□□□□ 0.34
HDAC2-209ENST00000520895 ATL3Q6DD88 541 aa17.17■□□□□ 0.34
HDAC2-209ENST00000520895 PADI6Q6TGC4 694 aa17.17■□□□□ 0.34
HDAC2-209ENST00000520895 MAEAQ7L5Y9 396 aa17.17■□□□□ 0.34
HDAC2-209ENST00000520895 ZNF410Q86VK4 478 aa17.17■□□□□ 0.34
HDAC2-209ENST00000520895 KSR1Q8IVT5 923 aa17.17■□□□□ 0.34
HDAC2-209ENST00000520895 KCTD17Q8N5Z5 321 aa17.17■□□□□ 0.34
HDAC2-209ENST00000520895 KRI1Q8N9T8 703 aaKnown RBP17.17■□□□□ 0.34
HDAC2-209ENST00000520895 MCPH1Q8NEM0 835 aa17.17■□□□□ 0.34
HDAC2-209ENST00000520895 PHOSPHO2Q8TCD6 241 aa17.17■□□□□ 0.34
HDAC2-209ENST00000520895 PLIN2Q99541 437 aa17.17■□□□□ 0.34
HDAC2-209ENST00000520895 FTHL17Q9BXU8 183 aa17.17■□□□□ 0.34
HDAC2-209ENST00000520895 CSRNP2Q9H175 543 aa17.17■□□□□ 0.34
HDAC2-209ENST00000520895 XPNPEP1Q9NQW7 623 aa17.17■□□□□ 0.34
HDAC2-209ENST00000520895 CFAP45Q9UL16 551 aa17.17■□□□□ 0.34
HDAC2-209ENST00000520895 GBF1Q92538 1859 aa17.16■□□□□ 0.34
HDAC2-209ENST00000520895 A0A087WZ62 844 aa17.16■□□□□ 0.34
HDAC2-209ENST00000520895 SPTLC2O15270 562 aa17.16■□□□□ 0.34
HDAC2-209ENST00000520895 ASAP2O43150 1006 aa17.16■□□□□ 0.34
HDAC2-209ENST00000520895 EYA4O95677 639 aa17.16■□□□□ 0.34
HDAC2-209ENST00000520895 SRGAP2CP0DJJ0 459 aa17.16■□□□□ 0.34
HDAC2-209ENST00000520895 DARSP14868 501 aaKnown RBP17.16■□□□□ 0.34
HDAC2-209ENST00000520895 TXLNAP40222 546 aa17.16■□□□□ 0.34
HDAC2-209ENST00000520895 LAMTOR4Q0VGL1 99 aa17.16■□□□□ 0.34
HDAC2-209ENST00000520895 MXD4Q14582 209 aaPredicted RBP17.16■□□□□ 0.34
HDAC2-209ENST00000520895 HYIQ5T013 277 aa17.16■□□□□ 0.34
HDAC2-209ENST00000520895 FAM109BQ6ICB4 259 aaPredicted RBP17.16■□□□□ 0.34
HDAC2-209ENST00000520895 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.16■□□□□ 0.342e-6■■□□□ 11.9
HDAC2-209ENST00000520895 LINC00301Q8NCQ3 95 aa17.16■□□□□ 0.34
HDAC2-209ENST00000520895 LRCH3Q96II8 777 aa17.16■□□□□ 0.34
HDAC2-209ENST00000520895 PNMA5Q96PV4 448 aa17.16■□□□□ 0.34
HDAC2-209ENST00000520895 FDXACB1Q9BRP7 624 aaPredicted RBP17.16■□□□□ 0.34
HDAC2-209ENST00000520895 INO80BQ9C086 356 aaPredicted RBP17.16■□□□□ 0.34
HDAC2-209ENST00000520895 ERVK-5Q9HDB9 667 aa17.16■□□□□ 0.34
HDAC2-209ENST00000520895 ST3GAL5Q9UNP4 418 aa17.16■□□□□ 0.34
HDAC2-209ENST00000520895 ATP6V1DQ9Y5K8 247 aa17.16■□□□□ 0.34
HDAC2-209ENST00000520895 MORC2Q9Y6X9 1032 aaPredicted RBP17.16■□□□□ 0.34
HDAC2-209ENST00000520895 PTPRSQ13332 1948 aa17.15■□□□□ 0.34
HDAC2-209ENST00000520895 YEATS4O95619 227 aa17.15■□□□□ 0.34
HDAC2-209ENST00000520895 SSBP05455 408 aaKnown RBP eCLIP17.15■□□□□ 0.34
HDAC2-209ENST00000520895 CYP11B2P19099 503 aa17.15■□□□□ 0.34
HDAC2-209ENST00000520895 DEFB103AP81534 67 aa17.15■□□□□ 0.34
HDAC2-209ENST00000520895 DNM1Q05193 864 aaKnown RBP17.15■□□□□ 0.34
HDAC2-209ENST00000520895 GRB10Q13322 594 aa17.15■□□□□ 0.34
HDAC2-209ENST00000520895 TFDP1Q14186 410 aa17.15■□□□□ 0.34
HDAC2-209ENST00000520895 SPECC1Q5M775 1068 aa17.15■□□□□ 0.34
HDAC2-209ENST00000520895 FAM102BQ5T8I3 360 aa17.15■□□□□ 0.34
HDAC2-209ENST00000520895 FAM228AQ86W67 206 aa17.15■□□□□ 0.34
HDAC2-209ENST00000520895 HERC6Q8IVU3 1022 aa17.15■□□□□ 0.34
HDAC2-209ENST00000520895 MYOCDQ8IZQ8 938 aa17.15■□□□□ 0.34
HDAC2-209ENST00000520895 CLIC6Q96NY7 704 aa17.15■□□□□ 0.34
HDAC2-209ENST00000520895 ZBED2Q9BTP6 218 aa17.15■□□□□ 0.34
HDAC2-209ENST00000520895 POLR3FQ9H1D9 316 aaPredicted RBP17.15■□□□□ 0.34
HDAC2-209ENST00000520895 CCDC39Q9UFE4 941 aa17.15■□□□□ 0.34
HDAC2-209ENST00000520895 MSRAQ9UJ68 235 aa17.15■□□□□ 0.34
HDAC2-209ENST00000520895 COL6A3P12111 3177 aa17.15■□□□□ 0.34
HDAC2-209ENST00000520895 CHD7Q9P2D1 2997 aa17.15■□□□□ 0.34
HDAC2-209ENST00000520895 PPP6R2O75170 966 aa17.14■□□□□ 0.33
HDAC2-209ENST00000520895 SLC34A2O95436 690 aa17.14■□□□□ 0.33
HDAC2-209ENST00000520895 SFPQP23246 707 aaKnown RBP eCLIP17.14■□□□□ 0.33
HDAC2-209ENST00000520895 ARL2P36404 184 aa17.14■□□□□ 0.33
HDAC2-209ENST00000520895 NUCB2P80303 420 aa17.14■□□□□ 0.33
HDAC2-209ENST00000520895 KARSQ15046 597 aaKnown RBP17.14■□□□□ 0.33
HDAC2-209ENST00000520895 RAB30Q15771 203 aa17.14■□□□□ 0.33
HDAC2-209ENST00000520895 FAM117BQ6P1L5 589 aa17.14■□□□□ 0.33
HDAC2-209ENST00000520895 FAM43BQ6ZT52 329 aaPredicted RBP17.14■□□□□ 0.33
HDAC2-209ENST00000520895 KCNK18Q7Z418 384 aa17.14■□□□□ 0.33
HDAC2-209ENST00000520895 RNF149Q8NC42 400 aa17.14■□□□□ 0.33
HDAC2-209ENST00000520895 KCNG4Q8TDN1 519 aa17.14■□□□□ 0.33
HDAC2-209ENST00000520895 SYMPKQ92797 1274 aaKnown RBP17.14■□□□□ 0.33
HDAC2-209ENST00000520895 EPSTI1Q96J88 318 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms