RNA–Protein interactions for RNA: ENST00000513436.6

SERF1A-209, Transcript of small EDRK-rich factor 1A, humanhuman

TSL 3 BASIC

Gene SERF1A, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-209ENST00000513436 ALG13Q9NP73 1137 aaKnown RBP13.69□□□□□ -0.22
SERF1A-209ENST00000513436 PCDHB12Q9Y5F1 795 aa13.69□□□□□ -0.22
SERF1A-209ENST00000513436 MGEA5O60502 916 aa13.68□□□□□ -0.22
SERF1A-209ENST00000513436 EIF4BP23588 611 aaKnown RBP13.68□□□□□ -0.22
SERF1A-209ENST00000513436 KRT2P35908 639 aa13.68□□□□□ -0.22
SERF1A-209ENST00000513436 PSMC5P62195 406 aa13.68□□□□□ -0.22
SERF1A-209ENST00000513436 NPY5RQ15761 445 aa13.68□□□□□ -0.22
SERF1A-209ENST00000513436 PPP4R3AQ6IN85 833 aa13.68□□□□□ -0.22
SERF1A-209ENST00000513436 P2RX5Q93086 422 aa13.68□□□□□ -0.22
SERF1A-209ENST00000513436 MBOAT7Q96N66 472 aa13.68□□□□□ -0.22
SERF1A-209ENST00000513436 JPH2Q9BR39 696 aaPredicted RBP13.68□□□□□ -0.22
SERF1A-209ENST00000513436 GJB4Q9NTQ9 266 aa13.68□□□□□ -0.22
SERF1A-209ENST00000513436 CLDND1Q9NY35 253 aa13.68□□□□□ -0.22
SERF1A-209ENST00000513436 TTC28Q96AY4 2481 aa13.68□□□□□ -0.22
SERF1A-209ENST00000513436 SIP14410 1827 aa13.67□□□□□ -0.22
SERF1A-209ENST00000513436 SLC37A4O43826 429 aa13.67□□□□□ -0.22
SERF1A-209ENST00000513436 MCM4P33991 863 aa13.67□□□□□ -0.22
SERF1A-209ENST00000513436 DEKP35659 375 aaKnown RBP13.67□□□□□ -0.22
SERF1A-209ENST00000513436 GATMP50440 423 aa13.67□□□□□ -0.22
SERF1A-209ENST00000513436 GPC3P51654 580 aa13.67□□□□□ -0.22
SERF1A-209ENST00000513436 ME3Q16798 604 aa13.67□□□□□ -0.22
SERF1A-209ENST00000513436 PUS10Q3MIT2 529 aaKnown RBP13.67□□□□□ -0.22
SERF1A-209ENST00000513436 LEXMQ3ZCV2 418 aa13.67□□□□□ -0.22
SERF1A-209ENST00000513436 ABI1Q8IZP0 508 aa13.67□□□□□ -0.22
SERF1A-209ENST00000513436 OXER1Q8TDS5 423 aa13.67□□□□□ -0.22
SERF1A-209ENST00000513436 MICAL1Q8TDZ2 1067 aa13.67□□□□□ -0.22
SERF1A-209ENST00000513436 PABPC5Q96DU9 382 aaKnown RBP13.67□□□□□ -0.22
SERF1A-209ENST00000513436 NIFKQ9BYG3 293 aaKnown RBP13.67□□□□□ -0.22
SERF1A-209ENST00000513436 GCOM2Q9BZD3 368 aaPredicted RBP13.67□□□□□ -0.22
SERF1A-209ENST00000513436 IGFLR1Q9H665 355 aa13.67□□□□□ -0.22
SERF1A-209ENST00000513436 TMEM161AQ9NX61 479 aa13.67□□□□□ -0.22
SERF1A-209ENST00000513436 PLAGL2Q9UPG8 496 aa13.67□□□□□ -0.22
SERF1A-209ENST00000513436 FAM50BQ9Y247 325 aa13.67□□□□□ -0.22
SERF1A-209ENST00000513436 C9IYK1 514 aa13.66□□□□□ -0.22
SERF1A-209ENST00000513436 H3BQ06 376 aaPredicted RBP13.66□□□□□ -0.22
SERF1A-209ENST00000513436 HOXA2O43364 376 aa13.66□□□□□ -0.22
SERF1A-209ENST00000513436 CTDNEP1O95476 244 aa13.66□□□□□ -0.22
SERF1A-209ENST00000513436 P4HBP07237 508 aaKnown RBP13.66□□□□□ -0.22
SERF1A-209ENST00000513436 QARSP47897 775 aaKnown RBP13.66□□□□□ -0.22
SERF1A-209ENST00000513436 CUL4AQ13619 759 aa13.66□□□□□ -0.22
SERF1A-209ENST00000513436 FAM102BQ5T8I3 360 aa13.66□□□□□ -0.22
SERF1A-209ENST00000513436 PTCRAQ6ISU1 281 aaPredicted RBP13.66□□□□□ -0.22
SERF1A-209ENST00000513436 CRIPAKQ8N1N5 446 aa13.66□□□□□ -0.22
SERF1A-209ENST00000513436 KLHL23Q8NBE8 558 aa13.66□□□□□ -0.22
SERF1A-209ENST00000513436 RNF169Q8NCN4 708 aa13.66□□□□□ -0.22
SERF1A-209ENST00000513436 GTF3C6Q969F1 213 aa13.66□□□□□ -0.22
SERF1A-209ENST00000513436 SH2D3AQ9BRG2 576 aa13.66□□□□□ -0.22
SERF1A-209ENST00000513436 INO80BQ9C086 356 aaPredicted RBP13.66□□□□□ -0.22
SERF1A-209ENST00000513436 ADAMTS10Q9H324 1103 aa13.66□□□□□ -0.22
SERF1A-209ENST00000513436 COL4A4P53420 1690 aaPredicted RBP13.66□□□□□ -0.22
SERF1A-209ENST00000513436 TTC3P53804 2025 aa13.66□□□□□ -0.22
SERF1A-209ENST00000513436 TBX3O15119 743 aa13.66□□□□□ -0.22
SERF1A-209ENST00000513436 MMP1P03956 469 aa13.66□□□□□ -0.22
SERF1A-209ENST00000513436 FOSBP53539 338 aa13.66□□□□□ -0.22
SERF1A-209ENST00000513436 PPP2R5CQ13362 524 aa13.66□□□□□ -0.22
SERF1A-209ENST00000513436 TARBP2Q15633 366 aaKnown RBP13.66□□□□□ -0.22
SERF1A-209ENST00000513436 NCAPH2Q6IBW4 605 aa13.66□□□□□ -0.22
SERF1A-209ENST00000513436 RHPN2Q8IUC4 686 aa13.66□□□□□ -0.22
SERF1A-209ENST00000513436 EXOC8Q8IYI6 725 aa13.66□□□□□ -0.22
SERF1A-209ENST00000513436 SLFN12Q8IYM2 578 aa13.66□□□□□ -0.22
SERF1A-209ENST00000513436 LINC01465Q8N7H1 131 aa13.66□□□□□ -0.22
SERF1A-209ENST00000513436 TMX3Q96JJ7 454 aa13.66□□□□□ -0.22
SERF1A-209ENST00000513436 ELAC1Q9H777 363 aaKnown RBP13.66□□□□□ -0.22
SERF1A-209ENST00000513436 KCNMB3Q9NPA1 279 aa13.66□□□□□ -0.22
SERF1A-209ENST00000513436 DACT1Q9NYF0 836 aa13.66□□□□□ -0.22
SERF1A-209ENST00000513436 SUCLA2Q9P2R7 463 aaPredicted RBP13.66□□□□□ -0.22
SERF1A-209ENST00000513436 COL4A6Q14031 1691 aa13.65□□□□□ -0.22
SERF1A-209ENST00000513436 TMEM150BA6NC51 233 aa13.65□□□□□ -0.22
SERF1A-209ENST00000513436 EML1O00423 815 aa13.65□□□□□ -0.22
SERF1A-209ENST00000513436 ITGB1P05556 798 aa13.65□□□□□ -0.22
SERF1A-209ENST00000513436 LINC00271P0C7V0 271 aa13.65□□□□□ -0.22
SERF1A-209ENST00000513436 DARSP14868 501 aaKnown RBP13.65□□□□□ -0.22
SERF1A-209ENST00000513436 FAM189BP81408 668 aa13.65□□□□□ -0.22
SERF1A-209ENST00000513436 NR5A1Q13285 461 aa13.65□□□□□ -0.22
SERF1A-209ENST00000513436 EPHA7Q15375 998 aa13.65□□□□□ -0.22
SERF1A-209ENST00000513436 B3GNT9Q6UX72 402 aa13.65□□□□□ -0.22
SERF1A-209ENST00000513436 OTUD6AQ7L8S5 288 aa13.65□□□□□ -0.22
SERF1A-209ENST00000513436 THNSL1Q8IYQ7 743 aa13.65□□□□□ -0.22
SERF1A-209ENST00000513436 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.65□□□□□ -0.22
SERF1A-209ENST00000513436 SPPL3Q8TCT6 385 aa13.65□□□□□ -0.22
SERF1A-209ENST00000513436 POF1BQ8WVV4 589 aa13.65□□□□□ -0.22
SERF1A-209ENST00000513436 SLC7A3Q8WY07 619 aa13.65□□□□□ -0.22
SERF1A-209ENST00000513436 CEP170P1Q96L14 293 aa13.65□□□□□ -0.22
SERF1A-209ENST00000513436 TYW1Q9NV66 732 aaKnown RBP13.65□□□□□ -0.22
SERF1A-209ENST00000513436 REV3LO60673 3130 aa13.65□□□□□ -0.22
SERF1A-209ENST00000513436 MYH9P35579 1960 aaKnown RBP13.65□□□□□ -0.22
SERF1A-209ENST00000513436 TCF20Q9UGU0 1960 aaKnown RBP13.64□□□□□ -0.23
SERF1A-209ENST00000513436 MAFO75444 373 aaPredicted RBP13.64□□□□□ -0.23
SERF1A-209ENST00000513436 LARGE1O95461 756 aa13.64□□□□□ -0.23
SERF1A-209ENST00000513436 HSP90AA1P07900 732 aaKnown RBP13.64□□□□□ -0.23
SERF1A-209ENST00000513436 FGFR1P11362 822 aa13.64□□□□□ -0.23
SERF1A-209ENST00000513436 FDPSP14324 419 aaKnown RBP13.64□□□□□ -0.23
SERF1A-209ENST00000513436 FGFR4P22455 802 aa13.64□□□□□ -0.23
SERF1A-209ENST00000513436 SFPQP23246 707 aaKnown RBP eCLIP13.64□□□□□ -0.23
SERF1A-209ENST00000513436 SSTR3P32745 418 aaPredicted RBP13.64□□□□□ -0.23
SERF1A-209ENST00000513436 POLGP54098 1239 aaPredicted RBP13.64□□□□□ -0.23
SERF1A-209ENST00000513436 PKP1Q13835 747 aa13.64□□□□□ -0.23
SERF1A-209ENST00000513436 DSC3Q14574 896 aa13.64□□□□□ -0.23
SERF1A-209ENST00000513436 SAFBQ15424 915 aaKnown RBP eCLIP13.64□□□□□ -0.23
SERF1A-209ENST00000513436 CSPP1Q1MSJ5 1256 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms