RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 GNPTABQ3T906 1256 aa22.1■■□□□ 1.13
RARA-201ENST00000254066 CHADLQ6NUI6 762 aa22.1■■□□□ 1.13
RARA-201ENST00000254066 AGGF1Q8N302 714 aaeCLIP22.1■■□□□ 1.13
RARA-201ENST00000254066 KIF2BQ8N4N8 673 aa22.1■■□□□ 1.13
RARA-201ENST00000254066 ENDOVQ8N8Q3 282 aaKnown RBP22.1■■□□□ 1.13
RARA-201ENST00000254066 PROCA1Q8NCQ7 364 aaPredicted RBP22.1■■□□□ 1.13
RARA-201ENST00000254066 LARP4BQ92615 738 aaKnown RBP22.1■■□□□ 1.13
RARA-201ENST00000254066 WDR35Q9P2L0 1181 aa22.1■■□□□ 1.13
RARA-201ENST00000254066 MTRF1LQ9UGC7 380 aaKnown RBP22.1■■□□□ 1.13
RARA-201ENST00000254066 NHSQ6T4R5 1651 aa22.1■■□□□ 1.13
RARA-201ENST00000254066 SPDYE3A6NKU9 549 aa22.1■■□□□ 1.13
RARA-201ENST00000254066 ATP5DP30049 168 aa22.1■■□□□ 1.13
RARA-201ENST00000254066 KLC1Q07866 573 aa22.1■■□□□ 1.13
RARA-201ENST00000254066 ZNF571Q7Z3V5 609 aaPredicted RBP22.1■■□□□ 1.13
RARA-201ENST00000254066 FITM2Q8N6M3 262 aa22.1■■□□□ 1.13
RARA-201ENST00000254066 STK32AQ8WU08 396 aa22.1■■□□□ 1.13
RARA-201ENST00000254066 DYDC1Q8WWB3 177 aa22.1■■□□□ 1.13
RARA-201ENST00000254066 RUNDC3BQ96NL0 473 aa22.1■■□□□ 1.13
RARA-201ENST00000254066 TMEM237Q96Q45 408 aa22.1■■□□□ 1.13
RARA-201ENST00000254066 VCXQ9H320 206 aa22.1■■□□□ 1.13
RARA-201ENST00000254066 RASGRF2O14827 1237 aa22.09■■□□□ 1.13
RARA-201ENST00000254066 H2AFZP0C0S5 128 aa22.09■■□□□ 1.13
RARA-201ENST00000254066 IFNAR2P48551 515 aa22.09■■□□□ 1.13
RARA-201ENST00000254066 TSNAXIP1Q2TAA8 658 aa22.09■■□□□ 1.13
RARA-201ENST00000254066 H2AFVQ71UI9 128 aa22.09■■□□□ 1.13
RARA-201ENST00000254066 VPS36Q86VN1 386 aa22.09■■□□□ 1.13
RARA-201ENST00000254066 CARD9Q9H257 536 aa22.09■■□□□ 1.13
RARA-201ENST00000254066 ARHGEF10LQ9HCE6 1279 aa22.09■■□□□ 1.13
RARA-201ENST00000254066 CYP39A1Q9NYL5 469 aa22.09■■□□□ 1.13
RARA-201ENST00000254066 SETSIPP0DME0 302 aa22.09■■□□□ 1.13
RARA-201ENST00000254066 PCK1P35558 622 aa22.09■■□□□ 1.13
RARA-201ENST00000254066 ARID5AQ03989 594 aa22.09■■□□□ 1.13
RARA-201ENST00000254066 AUHQ13825 339 aaKnown RBP22.09■■□□□ 1.13
RARA-201ENST00000254066 ZDHHC24Q6UX98 284 aa22.09■■□□□ 1.13
RARA-201ENST00000254066 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP22.09■■□□□ 1.132e-6■■■■■ 163.7
RARA-201ENST00000254066 CNBD1Q8NA66 436 aa22.09■■□□□ 1.13
RARA-201ENST00000254066 ARHGEF1Q92888 912 aaKnown RBP22.09■■□□□ 1.13
RARA-201ENST00000254066 GPKOWQ92917 476 aaPredicted RBP eCLIP22.09■■□□□ 1.13
RARA-201ENST00000254066 CCDC97Q96F63 343 aaPredicted RBP22.09■■□□□ 1.13
RARA-201ENST00000254066 FGFR1OP2Q9NVK5 253 aa22.09■■□□□ 1.13
RARA-201ENST00000254066 BARHL2Q9NY43 387 aa22.09■■□□□ 1.13
RARA-201ENST00000254066 RPTORQ8N122 1335 aa22.08■■□□□ 1.13
RARA-201ENST00000254066 TCP11X1B4DZS4 312 aa22.08■■□□□ 1.13
RARA-201ENST00000254066 TRAF5O00463 557 aa22.08■■□□□ 1.13
RARA-201ENST00000254066 KIAA0391O15091 583 aaKnown RBP22.08■■□□□ 1.13
RARA-201ENST00000254066 GFPT2O94808 682 aa22.08■■□□□ 1.13
RARA-201ENST00000254066 FGGP02679 453 aa22.08■■□□□ 1.13
RARA-201ENST00000254066 GRB10Q13322 594 aa22.08■■□□□ 1.13
RARA-201ENST00000254066 SDCCAG8Q86SQ7 713 aaPredicted RBP22.08■■□□□ 1.13
RARA-201ENST00000254066 RPUSD2Q8IZ73 545 aaKnown RBP22.08■■□□□ 1.13
RARA-201ENST00000254066 SYNE4Q8N205 404 aa22.08■■□□□ 1.13
RARA-201ENST00000254066 PIGOQ8TEQ8 1089 aa22.08■■□□□ 1.13
RARA-201ENST00000254066 DTNBP1Q96EV8 351 aa22.08■■□□□ 1.13
RARA-201ENST00000254066 TRAPPC9Q96Q05 1148 aa22.08■■□□□ 1.13
RARA-201ENST00000254066 KLHL14Q9P2G3 628 aa22.08■■□□□ 1.13
RARA-201ENST00000254066 HSPA6P17066 643 aa22.08■■□□□ 1.12
RARA-201ENST00000254066 PEX5P50542 639 aa22.08■■□□□ 1.12
RARA-201ENST00000254066 CKAP2Q8WWK9 683 aa22.08■■□□□ 1.12
RARA-201ENST00000254066 LRMDAQ9H2I8 198 aa22.08■■□□□ 1.12
RARA-201ENST00000254066 POTEFA5A3E0 1075 aa22.07■■□□□ 1.12
RARA-201ENST00000254066 PODXLO00592 558 aa22.07■■□□□ 1.12
RARA-201ENST00000254066 POTEIP0CG38 1075 aa22.07■■□□□ 1.12
RARA-201ENST00000254066 POTEJP0CG39 1038 aa22.07■■□□□ 1.12
RARA-201ENST00000254066 DYNC1I2Q13409 638 aaKnown RBP22.07■■□□□ 1.12
RARA-201ENST00000254066 LAMB3Q13751 1172 aa22.07■■□□□ 1.12
RARA-201ENST00000254066 POTEEQ6S8J3 1075 aa22.07■■□□□ 1.12
RARA-201ENST00000254066 INPP5DQ92835 1189 aa22.07■■□□□ 1.12
RARA-201ENST00000254066 TRIM31Q9BZY9 425 aa22.07■■□□□ 1.12
RARA-201ENST00000254066 GOLPH3Q9H4A6 298 aa22.07■■□□□ 1.12
RARA-201ENST00000254066 PDLIM1O00151 329 aa22.07■■□□□ 1.12
RARA-201ENST00000254066 GSTA2P09210 222 aa22.07■■□□□ 1.12
RARA-201ENST00000254066 TPBGLP0DKB5 382 aa22.07■■□□□ 1.12
RARA-201ENST00000254066 RARGP13631 454 aa22.07■■□□□ 1.12
RARA-201ENST00000254066 MAPK7Q13164 816 aa22.07■■□□□ 1.12
RARA-201ENST00000254066 NONOQ15233 471 aaKnown RBP eCLIP22.07■■□□□ 1.122e-6■■■■□ 22.7
RARA-201ENST00000254066 TBC1D25Q3MII6 688 aa22.07■■□□□ 1.12
RARA-201ENST00000254066 WASHC2DQ5SRD0 308 aa22.07■■□□□ 1.12
RARA-201ENST00000254066 NUGGCQ68CJ6 796 aa22.07■■□□□ 1.12
RARA-201ENST00000254066 ADGRA1Q86SQ6 560 aa22.07■■□□□ 1.12
RARA-201ENST00000254066 EXOC3L1Q86VI1 746 aa22.07■■□□□ 1.12
RARA-201ENST00000254066 ZC3H3Q8IXZ2 948 aaKnown RBP22.07■■□□□ 1.12
RARA-201ENST00000254066 HELBQ8NG08 1087 aaPredicted RBP22.07■■□□□ 1.12
RARA-201ENST00000254066 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.07■■□□□ 1.12
RARA-201ENST00000254066 PCDH11YQ9BZA8 1340 aa22.06■■□□□ 1.12
RARA-201ENST00000254066 EYA4O95677 639 aa22.06■■□□□ 1.12
RARA-201ENST00000254066 LMNAP02545 664 aaKnown RBP22.06■■□□□ 1.12
RARA-201ENST00000254066 TECP42680 631 aa22.06■■□□□ 1.12
RARA-201ENST00000254066 PLTPP55058 493 aa22.06■■□□□ 1.12
RARA-201ENST00000254066 PDIA5Q14554 519 aa22.06■■□□□ 1.12
RARA-201ENST00000254066 HLFQ16534 295 aa22.06■■□□□ 1.12
RARA-201ENST00000254066 TRIM68Q6AZZ1 485 aa22.06■■□□□ 1.12
RARA-201ENST00000254066 IRGCQ6NXR0 463 aa22.06■■□□□ 1.12
RARA-201ENST00000254066 JAMLQ86YT9 394 aa22.06■■□□□ 1.12
RARA-201ENST00000254066 FBXO25Q8TCJ0 367 aa22.06■■□□□ 1.12
RARA-201ENST00000254066 USP40Q9NVE5 1235 aa22.06■■□□□ 1.12
RARA-201ENST00000254066 CTTNBP2NLQ9P2B4 639 aa22.06■■□□□ 1.12
RARA-201ENST00000254066 PNMA3Q9UL41 463 aa22.06■■□□□ 1.12
RARA-201ENST00000254066 COL1A1P02452 1464 aaPredicted RBP22.06■■□□□ 1.12
RARA-201ENST00000254066 SMIM22K7EJ46 135 aa22.06■■□□□ 1.12
RARA-201ENST00000254066 RIPK2O43353 540 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms