RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Ttc16Q8C1F5 767 aa13.81□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Bud13Q8R149 637 aa13.81□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Klf15Q9EPW2 415 aa13.81□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Tlr5Q9JLF7 859 aa13.81□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Fem1bQ9Z2G0 627 aa13.81□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Sorbs1Q62417 1290 aa13.81□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Igsf3Q6ZQA6 1194 aa13.81□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Pja2Q80U04 707 aa13.81□□□□□ -0.2
Rnf4-201ENSMUST00000030992 NrcamQ810U4 1256 aa13.81□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Micall1Q8BGT6 870 aa13.81□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Pcdhb12Q91Y07 789 aa13.81□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Stx17Q9D0I4 301 aa13.81□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Tgm5Q9D7I9 724 aa13.81□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Sept3Q9Z1S5 350 aa13.81□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Zswim8Q3UHH1 1832 aaKnown RBP13.8□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Cfap70D3YVL2 1141 aa13.8□□□□□ -0.2
Rnf4-201ENSMUST00000030992 E9QMW4 1145 aa13.8□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Mroh9G5E8L9 891 aa13.8□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Bace1P56818 501 aa13.8□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Cct5P80316 541 aaKnown RBP13.8□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Acot6Q32Q92 419 aa13.8□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Psmd1Q3TXS7 953 aa13.8□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Zfp953Q3UPV7 304 aa13.8□□□□□ -0.2
Rnf4-201ENSMUST00000030992 AlcamQ61490 583 aa13.8□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Pick1Q62083 416 aa13.8□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Sp4Q62445 782 aa13.8□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Gpd2Q64521 727 aa13.8□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Rapgef5Q8C0Q9 814 aa13.8□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Slc18a1Q8R090 521 aa13.8□□□□□ -0.2
Rnf4-201ENSMUST00000030992 XdhQ00519 1335 aa13.8□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Mageb2A2AHM0 380 aa13.8□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Gm10110D3Z5M2 615 aa13.8□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Nap1l1P28656 391 aaKnown RBP13.8□□□□□ -0.2
Rnf4-201ENSMUST00000030992 MpndQ3TV65 487 aa13.8□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Klra6Q60653 266 aa13.8□□□□□ -0.2
Rnf4-201ENSMUST00000030992 PicalmQ7M6Y3 660 aaKnown RBP13.8□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Tcp10aQ80W76 438 aa13.8□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Klhl7Q8BUL5 586 aa13.8□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Ndfip2Q91ZP6 311 aa13.8□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Alg1Q921Q3 482 aa13.8□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Pls3Q99K51 630 aa13.8□□□□□ -0.2
Rnf4-201ENSMUST00000030992 PdhbQ9D051 359 aa13.8□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Stk4Q9JI11 487 aa13.8□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Znf354bQ9QXT9 601 aa13.8□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Osbpl9A2A8Z1 736 aa13.79□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Sclt1G5E861 688 aa13.79□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Usp4P35123 962 aa13.79□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Gtf2bP62915 316 aa13.79□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Ppp3caP63328 521 aa13.79□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Specc1Q5SXY1 1067 aa13.79□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Ppp1r13bQ62415 1087 aa13.79□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Fmnl3Q6ZPF4 1028 aa13.79□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Ptrh1Q8BW00 204 aa13.79□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Usp27Q8CEG8 438 aa13.79□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Ctage5Q8R311 779 aa13.79□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Atp2a1Q8R429 994 aa13.79□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Senp2Q91ZX6 588 aa13.79□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Dph6Q9CQ28 267 aa13.79□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Cwc15Q9JHS9 229 aaKnown RBP13.79□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Ankrd2Q9WV06 328 aa13.79□□□□□ -0.2
Rnf4-201ENSMUST00000030992 TazI7HJS2 263 aa13.79□□□□□ -0.2
Rnf4-201ENSMUST00000030992 UgcgO88693 394 aa13.79□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Tagap1P0CAX8 505 aa13.79□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Slc3a2P10852 526 aaKnown RBP13.79□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Gjc1P28229 396 aa13.79□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Hspa9P38647 679 aaKnown RBP13.79□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Tax1bp1Q3UKC1 814 aaKnown RBP13.79□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Serpinb6dQ3UWK8 375 aa13.79□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Fgfr1opQ66JX5 399 aa13.79□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Ints8Q80V86 995 aa13.79□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Ublcp1Q8BGR9 318 aa13.79□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Slc12a8Q8VI23 705 aa13.79□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Smc6Q924W5 1097 aa13.79□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Cd2bp2Q9CWK3 342 aaKnown RBP13.79□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Ddx47Q9CWX9 455 aaKnown RBP13.79□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Serpinb3bQ9D1Q5 387 aa13.79□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Fam187aQ9D3R5 417 aa13.79□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Sapcd2Q9D818 391 aa13.79□□□□□ -0.2
Rnf4-201ENSMUST00000030992 SyncQ9EPM5 470 aa13.79□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Map3k20Q9ESL4 802 aaKnown RBP13.79□□□□□ -0.2
Rnf4-201ENSMUST00000030992 NrapQ80XB4 1728 aa13.79□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Nova2D3YVV7 556 aaKnown RBP13.78□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Mucl2P02815 138 aa13.78□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Irf8P23611 424 aa13.78□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Ap1m1P35585 423 aa13.78□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Nr1d1Q3UV55 615 aa13.78□□□□□ -0.2
Rnf4-201ENSMUST00000030992 MaeaQ4VC33 396 aa13.78□□□□□ -0.2
Rnf4-201ENSMUST00000030992 ItgaeQ60677 1167 aa13.78□□□□□ -0.2
Rnf4-201ENSMUST00000030992 PpanQ91YU8 470 aaKnown RBP13.78□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Capn9Q9D805 690 aa13.78□□□□□ -0.2
Rnf4-201ENSMUST00000030992 DohhA0A1Y7VJ29 135 aa13.78□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Ripor3A1L3T7 938 aa13.78□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Zfp213E9QAW0 468 aa13.78□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Prl6a1O35257 230 aa13.78□□□□□ -0.2
Rnf4-201ENSMUST00000030992 ThbdP15306 577 aa13.78□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Rnf113a2Q14B01 337 aa13.78□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Gngt1Q61012 74 aa13.78□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Styk1Q6J9G1 429 aa13.78□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Pgrmc2Q80UU9 217 aaKnown RBP13.78□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Fam43aQ8BUP8 424 aa13.78□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 24.7 ms