RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W YDC1Q02896 317 aa2.09□□□□□ -2.07
SEC16YPL085W SNZ1Q03148 297 aa2.09□□□□□ -2.07
SEC16YPL085W TSA2Q04120 196 aa2.09□□□□□ -2.07
SEC16YPL085W GRC3Q07845 632 aa2.09□□□□□ -2.07
SEC16YPL085W RRD2Q12461 358 aa2.09□□□□□ -2.07
SEC16YPL085W YIL177CP40434 1758 aa2.09□□□□□ -2.07
SEC16YPL085W YJL225CP40889 1758 aa2.09□□□□□ -2.07
SEC16YPL085W GIT1P25346 518 aa2.09□□□□□ -2.07
SEC16YPL085W LSB5P25369 354 aa2.09□□□□□ -2.07
SEC16YPL085W HXT3P32466 567 aaKnown RBP2.09□□□□□ -2.07
SEC16YPL085W HXT4P32467 576 aa2.09□□□□□ -2.07
SEC16YPL085W PTC1P35182 281 aa2.09□□□□□ -2.07
SEC16YPL085W SPT23P35210 1082 aa2.09□□□□□ -2.07
SEC16YPL085W YMR144WP40214 342 aaKnown RBP2.09□□□□□ -2.07
SEC16YPL085W NEO1P40527 1151 aa2.09□□□□□ -2.07
SEC16YPL085W DUG1P43616 481 aaKnown RBP2.09□□□□□ -2.07
SEC16YPL085W PPT1P53043 513 aa2.09□□□□□ -2.07
SEC16YPL085W CWC25P53854 179 aaKnown RBP2.09□□□□□ -2.07
SEC16YPL085W SLG1P54867 378 aa2.09□□□□□ -2.07
SEC16YPL085W DID2P69771 204 aa2.09□□□□□ -2.07
SEC16YPL085W ELP3Q02908 557 aaKnown RBP2.09□□□□□ -2.07
SEC16YPL085W ATG26Q06321 1198 aa2.09□□□□□ -2.07
SEC16YPL085W YDL199CQ12407 687 aa2.09□□□□□ -2.07
SEC16YPL085W CLN2P20438 545 aa2.09□□□□□ -2.08
SEC16YPL085W UTR1P21373 530 aa2.09□□□□□ -2.08
SEC16YPL085W MRPL20P22354 195 aaPredicted RBP2.09□□□□□ -2.08
SEC16YPL085W PDE1P22434 369 aa2.09□□□□□ -2.08
SEC16YPL085W NTG1P31378 399 aa2.09□□□□□ -2.08
SEC16YPL085W FPR2P32472 135 aa2.09□□□□□ -2.08
SEC16YPL085W SEC17P32602 292 aa2.09□□□□□ -2.08
SEC16YPL085W ECT1P33412 323 aa2.09□□□□□ -2.08
SEC16YPL085W MGE1P38523 228 aa2.09□□□□□ -2.08
SEC16YPL085W SOL3P38858 249 aa2.09□□□□□ -2.08
SEC16YPL085W ERV46P39727 415 aa2.09□□□□□ -2.08
SEC16YPL085W ECM10P39987 644 aa2.09□□□□□ -2.08
SEC16YPL085W SMK1P41808 388 aa2.09□□□□□ -2.08
SEC16YPL085W SER2P42941 309 aa2.09□□□□□ -2.08
SEC16YPL085W RPS7BP48164 190 aaKnown RBP2.09□□□□□ -2.08
SEC16YPL085W COS12P53053 380 aa2.09□□□□□ -2.08
SEC16YPL085W CBC2Q08920 208 aaKnown RBP RIP-Chip data2.09□□□□□ -2.08not detected
SEC16YPL085W YPL199CQ08954 240 aa2.09□□□□□ -2.08
SEC16YPL085W NIP7Q08962 181 aaKnown RBP2.09□□□□□ -2.08
SEC16YPL085W PER33Q12144 273 aa2.09□□□□□ -2.08
SEC16YPL085W ICT1Q12385 394 aa2.09□□□□□ -2.08
SEC16YPL085W GAL1P04385 528 aa2.09□□□□□ -2.08
SEC16YPL085W MET2P08465 486 aa2.09□□□□□ -2.08
SEC16YPL085W CKA1P15790 372 aa2.09□□□□□ -2.08
SEC16YPL085W CBF1P17106 351 aa2.09□□□□□ -2.08
SEC16YPL085W YPK2P18961 677 aa2.09□□□□□ -2.08
SEC16YPL085W BET2P20133 325 aa2.09□□□□□ -2.08
SEC16YPL085W ADE1P27616 306 aa2.09□□□□□ -2.08
SEC16YPL085W PDR3P33200 976 aa2.09□□□□□ -2.08
SEC16YPL085W SRP102P36057 244 aaPredicted RBP2.09□□□□□ -2.08
SEC16YPL085W ARA1P38115 344 aa2.09□□□□□ -2.08
SEC16YPL085W DTR1P38125 572 aa2.09□□□□□ -2.08
SEC16YPL085W ERC1P38767 581 aa2.09□□□□□ -2.08
SEC16YPL085W SAW1P39735 261 aa2.09□□□□□ -2.08
SEC16YPL085W ERG10P41338 398 aaKnown RBP2.09□□□□□ -2.08
SEC16YPL085W MEP3P53390 489 aa2.09□□□□□ -2.08
SEC16YPL085W DPB4Q04603 196 aaKnown RBP2.09□□□□□ -2.08
SEC16YPL085W YMR321CQ04898 105 aa2.09□□□□□ -2.08
SEC16YPL085W BNA5Q05979 453 aa2.09□□□□□ -2.08
SEC16YPL085W YPR098CQ06089 161 aa2.09□□□□□ -2.08
SEC16YPL085W YPR127WQ06494 345 aa2.09□□□□□ -2.08
SEC16YPL085W SOG2Q08817 791 aa2.09□□□□□ -2.08
SEC16YPL085W TMS1Q12116 473 aa2.09□□□□□ -2.08
SEC16YPL085W RTR2Q12378 196 aa2.09□□□□□ -2.08
SEC16YPL085W MEX67Q99257 599 aaKnown RBP2.09□□□□□ -2.08
SEC16YPL085W SIR3P06701 978 aa2.08□□□□□ -2.08
SEC16YPL085W MET16P18408 261 aaPredicted RBP2.08□□□□□ -2.08
SEC16YPL085W DRE2P36152 348 aa2.08□□□□□ -2.08
SEC16YPL085W YBR138CP38277 524 aa2.08□□□□□ -2.08
SEC16YPL085W RRF1P38771 230 aa2.08□□□□□ -2.08
SEC16YPL085W ALY2P47029 1046 aa2.08□□□□□ -2.08
SEC16YPL085W ACS2P52910 683 aaKnown RBP2.08□□□□□ -2.08
SEC16YPL085W PLB2Q03674 706 aa2.08□□□□□ -2.08
SEC16YPL085W SNX41Q04053 625 aa2.08□□□□□ -2.08
SEC16YPL085W PEX10Q05568 337 aa2.08□□□□□ -2.08
SEC16YPL085W AIM6Q07716 390 aa2.08□□□□□ -2.08
SEC16YPL085W YOR223WQ12015 292 aa2.08□□□□□ -2.08
SEC16YPL085W LEU1P07264 779 aaKnown RBP2.08□□□□□ -2.08
SEC16YPL085W MATALPHA1P0CY06 175 aa2.08□□□□□ -2.08
SEC16YPL085W HMLALPHA1P0CY07 175 aa2.08□□□□□ -2.08
SEC16YPL085W PDX1P16451 410 aa2.08□□□□□ -2.08
SEC16YPL085W CBT1P36038 271 aaPredicted RBP2.08□□□□□ -2.08
SEC16YPL085W CMC1P36064 111 aa2.08□□□□□ -2.08
SEC16YPL085W SRL3P36167 246 aa2.08□□□□□ -2.08
SEC16YPL085W PHO89P38361 574 aa2.08□□□□□ -2.08
SEC16YPL085W EFM1P38732 585 aa2.08□□□□□ -2.08
SEC16YPL085W HRB1P38922 454 aaKnown RBP RIP-Chip data2.08□□□□□ -2.08not detected
SEC16YPL085W YNL320WP42840 284 aa2.08□□□□□ -2.08
SEC16YPL085W AVT1P47082 602 aa2.08□□□□□ -2.08
SEC16YPL085W CAF40P53829 373 aa2.08□□□□□ -2.08
SEC16YPL085W IGO1P53897 168 aa2.08□□□□□ -2.08
SEC16YPL085W YMR310CQ04867 317 aaPredicted RBP2.08□□□□□ -2.08
SEC16YPL085W LIP2Q06005 328 aa2.08□□□□□ -2.08
SEC16YPL085W GAS2Q06135 555 aa2.08□□□□□ -2.08
SEC16YPL085W ENT4Q07872 247 aa2.08□□□□□ -2.08
SEC16YPL085W RFU1Q08003 200 aa2.08□□□□□ -2.08
SEC16YPL085W YPL225WQ08971 146 aaKnown RBP2.08□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms