RNA–Protein interactions for RNA: YPL003W

ULA1, Transcript of Protein that activates Rub1p (NEDD8) before neddylation, yeast

Gene ULA1, Length 1,389 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ULA1	YPL003W	RPC40	P07703	335 aa	Known RBP	4.91	□□□□□ -1.62
ULA1	YPL003W	CLB2	P24869	491 aa		4.91	□□□□□ -1.62
ULA1	YPL003W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
ULA1	YPL003W	PRP19	P32523	503 aa	Known RBP	4.91	□□□□□ -1.62
ULA1	YPL003W	TOD6	P34219	525 aa		4.91	□□□□□ -1.62
ULA1	YPL003W	AUR1	P36107	401 aa	Predicted RBP	4.91	□□□□□ -1.62
ULA1	YPL003W	UTH1	P36135	365 aa		4.91	□□□□□ -1.62
ULA1	YPL003W	MRPL15	P36523	253 aa		4.91	□□□□□ -1.62
ULA1	YPL003W	IFA38	P38286	347 aa		4.91	□□□□□ -1.62
ULA1	YPL003W	YBR238C	P38330	731 aa	Known RBP	4.91	□□□□□ -1.62
ULA1	YPL003W	SBE22	P38814	852 aa		4.91	□□□□□ -1.62
ULA1	YPL003W	GIP2	P40036	548 aa		4.91	□□□□□ -1.62
ULA1	YPL003W	CFD1	P40558	293 aa		4.91	□□□□□ -1.62
ULA1	YPL003W	GCN20	P43535	752 aa	Known RBP	4.91	□□□□□ -1.62
ULA1	YPL003W	CHA4	P43634	648 aa		4.91	□□□□□ -1.62
ULA1	YPL003W	APS3	P47064	194 aa		4.91	□□□□□ -1.62
ULA1	YPL003W	IMD4	P50094	524 aa	Known RBP	4.91	□□□□□ -1.62
ULA1	YPL003W	SHE4	P51534	789 aa		4.91	□□□□□ -1.62
ULA1	YPL003W	ASI1	P54074	624 aa		4.91	□□□□□ -1.62
ULA1	YPL003W	ERG13	P54839	491 aa	Known RBP	4.91	□□□□□ -1.62
ULA1	YPL003W	ABZ2	Q03266	374 aa		4.91	□□□□□ -1.62
ULA1	YPL003W	RNH1	Q04740	348 aa		4.91	□□□□□ -1.62
ULA1	YPL003W	FMP42	Q04991	504 aa		4.91	□□□□□ -1.62
ULA1	YPL003W	YLR456W	Q06199	204 aa		4.91	□□□□□ -1.62
ULA1	YPL003W	NOP12	Q08208	459 aa	Known RBP	4.91	□□□□□ -1.62
ULA1	YPL003W	BSC6	Q08280	497 aa		4.91	□□□□□ -1.62
ULA1	YPL003W	YOR365C	Q08844	703 aa		4.91	□□□□□ -1.62
ULA1	YPL003W	PNS1	Q12412	539 aa		4.91	□□□□□ -1.62
ULA1	YPL003W	RPS21B	Q3E754	87 aa	Known RBP	4.91	□□□□□ -1.62
ULA1	YPL003W	SAM35	P14693	329 aa		4.9	□□□□□ -1.63
ULA1	YPL003W	IDP1	P21954	428 aa	Known RBP	4.9	□□□□□ -1.63
ULA1	YPL003W	YCK1	P23291	538 aa		4.9	□□□□□ -1.63
ULA1	YPL003W	SBA1	P28707	216 aa	Known RBP	4.9	□□□□□ -1.63
ULA1	YPL003W	ITR2	P30606	609 aa		4.9	□□□□□ -1.63
ULA1	YPL003W	OAC1	P32332	324 aa		4.9	□□□□□ -1.63
ULA1	YPL003W	PUP2	P32379	260 aa		4.9	□□□□□ -1.63
ULA1	YPL003W	HBS1	P32769	611 aa	Known RBP	4.9	□□□□□ -1.63
ULA1	YPL003W	MAE1	P36013	669 aa	Known RBP	4.9	□□□□□ -1.63
ULA1	YPL003W	PEX18	P38855	283 aa		4.9	□□□□□ -1.63
ULA1	YPL003W	DDI1	P40087	428 aa		4.9	□□□□□ -1.63
ULA1	YPL003W	RRG9	P40156	214 aa		4.9	□□□□□ -1.63
ULA1	YPL003W	BAT2	P47176	376 aa	Known RBP	4.9	□□□□□ -1.63
ULA1	YPL003W	EXG2	P52911	562 aa		4.9	□□□□□ -1.63
ULA1	YPL003W	NQM1	P53228	333 aa	Predicted RBP	4.9	□□□□□ -1.63
ULA1	YPL003W	MEP3	P53390	489 aa		4.9	□□□□□ -1.63
ULA1	YPL003W	CUZ1	P53899	274 aa		4.9	□□□□□ -1.63
ULA1	YPL003W	YPL068C	Q02749	293 aa		4.9	□□□□□ -1.63
ULA1	YPL003W	NOG1	Q02892	647 aa	Known RBP	4.9	□□□□□ -1.63
ULA1	YPL003W	URC2	Q04411	772 aa		4.9	□□□□□ -1.63
ULA1	YPL003W	NEJ1	Q06148	342 aa		4.9	□□□□□ -1.63
ULA1	YPL003W	YLR446W	Q06204	433 aa		4.9	□□□□□ -1.63
ULA1	YPL003W	FMP45	Q07651	309 aa		4.9	□□□□□ -1.63
ULA1	YPL003W	APC2	Q12440	853 aa		4.9	□□□□□ -1.63
ULA1	YPL003W	SIR3	P06701	978 aa		4.89	□□□□□ -1.63
ULA1	YPL003W	ENA1	P13587	1091 aa		4.89	□□□□□ -1.63
ULA1	YPL003W	SNF6	P18888	332 aa		4.89	□□□□□ -1.63
ULA1	YPL003W	MCK1	P21965	375 aa	Known RBP	4.89	□□□□□ -1.63
ULA1	YPL003W	DCG1	P32460	244 aa		4.89	□□□□□ -1.63
ULA1	YPL003W	LYP1	P32487	611 aa		4.89	□□□□□ -1.63
ULA1	YPL003W	TAF14	P35189	244 aa		4.89	□□□□□ -1.63
ULA1	YPL003W	SRO77	P38163	1010 aa		4.89	□□□□□ -1.63
ULA1	YPL003W	FMP23	P38231	175 aa		4.89	□□□□□ -1.63
ULA1	YPL003W	FES1	P38260	290 aa		4.89	□□□□□ -1.63
ULA1	YPL003W	ARN2	P38724	620 aa		4.89	□□□□□ -1.63
ULA1	YPL003W	YHR097C	P38809	366 aa	Known RBP	4.89	□□□□□ -1.63
ULA1	YPL003W	VPS52	P39904	641 aa		4.89	□□□□□ -1.63
ULA1	YPL003W	FMP52	P40008	231 aa		4.89	□□□□□ -1.63
ULA1	YPL003W	BUR6	P40096	142 aa		4.89	□□□□□ -1.63
ULA1	YPL003W	ICE2	P40499	491 aa		4.89	□□□□□ -1.63
ULA1	YPL003W	ALK1	P43633	760 aa	Known RBP	4.89	□□□□□ -1.63
ULA1	YPL003W	IDS2	P46958	469 aa		4.89	□□□□□ -1.63
ULA1	YPL003W	ALB1	P47019	175 aa	Predicted RBP	4.89	□□□□□ -1.63
ULA1	YPL003W	HMS2	P47175	358 aa		4.89	□□□□□ -1.63
ULA1	YPL003W	MAL11	P53048	616 aa		4.89	□□□□□ -1.63
ULA1	YPL003W	DBP6	P53734	629 aa	Known RBP	4.89	□□□□□ -1.63
ULA1	YPL003W	SNP1	Q00916	300 aa	Predicted RBP	4.89	□□□□□ -1.63
ULA1	YPL003W	ENA2	Q01896	1091 aa		4.89	□□□□□ -1.63
ULA1	YPL003W	GRX5	Q02784	150 aa		4.89	□□□□□ -1.63
ULA1	YPL003W	CTL1	Q03220	320 aa	Known RBP	4.89	□□□□□ -1.63
ULA1	YPL003W	GAL83	Q04739	417 aa		4.89	□□□□□ -1.63
ULA1	YPL003W	YDL211C	Q12121	372 aa		4.89	□□□□□ -1.63
ULA1	YPL003W	MSH5	Q12175	901 aa		4.89	□□□□□ -1.63
ULA1	YPL003W	SIA1	Q12212	622 aa		4.89	□□□□□ -1.63
ULA1	YPL003W	ENA5	Q12691	1091 aa		4.89	□□□□□ -1.63
ULA1	YPL003W	REP1	P03871	373 aa		4.88	□□□□□ -1.63
ULA1	YPL003W	AI1	P03875	834 aa		4.88	□□□□□ -1.63
ULA1	YPL003W	PBN1	P25580	416 aa		4.88	□□□□□ -1.63
ULA1	YPL003W	PTR2	P32901	601 aa		4.88	□□□□□ -1.63
ULA1	YPL003W	ECM15	P35195	104 aa		4.88	□□□□□ -1.63
ULA1	YPL003W	RPS27A	P35997	82 aa	Known RBP	4.88	□□□□□ -1.63
ULA1	YPL003W	DHR2	P36009	735 aa	Predicted RBP	4.88	□□□□□ -1.63
ULA1	YPL003W	EXO84	P38261	753 aa		4.88	□□□□□ -1.63
ULA1	YPL003W	RPS27B	P38711	82 aa		4.88	□□□□□ -1.63
ULA1	YPL003W	MDM31	P38880	579 aa		4.88	□□□□□ -1.63
ULA1	YPL003W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
ULA1	YPL003W	YEL068C	P39977	110 aa		4.88	□□□□□ -1.63
ULA1	YPL003W	GID8	P40208	455 aa		4.88	□□□□□ -1.63
ULA1	YPL003W	YIL086C	P40503	102 aa		4.88	□□□□□ -1.63
ULA1	YPL003W	SMK1	P41808	388 aa		4.88	□□□□□ -1.63
ULA1	YPL003W	JHD2	P47156	728 aa	Predicted RBP	4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms