RNA–Protein interactions for RNA: YOR171C

LCB4, Transcript of Sphingoid long-chain base kinase, yeastyeast

Gene LCB4, Length 1,875 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB4YOR171C YDR541CQ03049 344 aa3.01□□□□□ -1.93
LCB4YOR171C YDR109CQ04585 715 aa3.01□□□□□ -1.93
LCB4YOR171C YMR310CQ04867 317 aaPredicted RBP3.01□□□□□ -1.93
LCB4YOR171C BSP1Q06604 576 aa3.01□□□□□ -1.93
LCB4YOR171C IPK1Q06667 281 aa3.01□□□□□ -1.93
LCB4YOR171C RFU1Q08003 200 aa3.01□□□□□ -1.93
LCB4YOR171C PER33Q12144 273 aa3.01□□□□□ -1.93
LCB4YOR171C FRE7Q12333 620 aa3.01□□□□□ -1.93
LCB4YOR171C ADH2P00331 348 aaKnown RBP3□□□□□ -1.93
LCB4YOR171C GDH1P07262 454 aaKnown RBP3□□□□□ -1.93
LCB4YOR171C MRP13P12686 339 aa3□□□□□ -1.93
LCB4YOR171C CLN3P13365 580 aa3□□□□□ -1.93
LCB4YOR171C PMR1P13586 950 aa3□□□□□ -1.93
LCB4YOR171C CKI1P20485 582 aa3□□□□□ -1.93
LCB4YOR171C DBF2P22204 572 aa3□□□□□ -1.93
LCB4YOR171C CNA1P23287 553 aa3□□□□□ -1.93
LCB4YOR171C GPI12P23797 304 aa3□□□□□ -1.93
LCB4YOR171C SRB5P32585 307 aa3□□□□□ -1.93
LCB4YOR171C FZO1P38297 855 aa3□□□□□ -1.93
LCB4YOR171C IMD2P38697 523 aaKnown RBP3□□□□□ -1.93
LCB4YOR171C ERV46P39727 415 aa3□□□□□ -1.93
LCB4YOR171C PHM8P40025 321 aa3□□□□□ -1.93
LCB4YOR171C YNL194CP40169 301 aa3□□□□□ -1.93
LCB4YOR171C SLM1P40485 686 aa3□□□□□ -1.93
LCB4YOR171C UFE1P41834 346 aa3□□□□□ -1.93
LCB4YOR171C PRM10P42946 383 aa3□□□□□ -1.93
LCB4YOR171C SCD6P45978 349 aaKnown RBP RIP-Chip data3□□□□□ -1.93not detected
LCB4YOR171C SNG1P46950 547 aa3□□□□□ -1.93
LCB4YOR171C CCC1P47818 322 aa3□□□□□ -1.93
LCB4YOR171C IMD3P50095 523 aaKnown RBP3□□□□□ -1.93
LCB4YOR171C SBH2P52871 88 aa3□□□□□ -1.93
LCB4YOR171C ALG11P53954 548 aaKnown RBP3□□□□□ -1.93
LCB4YOR171C EFM6P53970 246 aa3□□□□□ -1.93
LCB4YOR171C ASI1P54074 624 aa3□□□□□ -1.93
LCB4YOR171C DIS3Q08162 1001 aaKnown RBP3□□□□□ -1.93
LCB4YOR171C YLR053CQ12026 108 aa3□□□□□ -1.93
LCB4YOR171C SLF1Q12034 447 aaKnown RBP3□□□□□ -1.93
LCB4YOR171C RRI1Q12468 440 aa3□□□□□ -1.93
LCB4YOR171C YDL007C-AQ2V2Q0 85 aa3□□□□□ -1.93
LCB4YOR171C SPO24Q3E752 67 aa3□□□□□ -1.93
LCB4YOR171C ATP6P00854 259 aa2.99□□□□□ -1.93
LCB4YOR171C HIS3P06633 220 aa2.99□□□□□ -1.93
LCB4YOR171C YBR121C-AP0C5L4 52 aa2.99□□□□□ -1.93
LCB4YOR171C MAS2P11914 482 aa2.99□□□□□ -1.93
LCB4YOR171C DAL82P21705 255 aa2.99□□□□□ -1.93
LCB4YOR171C AAT2P23542 418 aaKnown RBP2.99□□□□□ -1.93
LCB4YOR171C HSP30P25619 332 aa2.99□□□□□ -1.93
LCB4YOR171C IDH1P28834 360 aaKnown RBP RIP-Chip data2.99□□□□□ -1.93not detected
LCB4YOR171C CAM1P29547 415 aaKnown RBP2.99□□□□□ -1.93
LCB4YOR171C MCH2P36032 473 aa2.99□□□□□ -1.93
LCB4YOR171C RTC2P38279 296 aa2.99□□□□□ -1.93
LCB4YOR171C SPP381P38282 291 aaPredicted RBP2.99□□□□□ -1.93
LCB4YOR171C YHI9P38765 294 aa2.99□□□□□ -1.93
LCB4YOR171C YNG2P38806 282 aaKnown RBP2.99□□□□□ -1.93
LCB4YOR171C YHR122WP38829 231 aa2.99□□□□□ -1.93
LCB4YOR171C RTS2P40962 232 aa2.99□□□□□ -1.93
LCB4YOR171C COS4P43542 379 aa2.99□□□□□ -1.93
LCB4YOR171C RPC17P47076 161 aa2.99□□□□□ -1.93
LCB4YOR171C NBP35P52920 328 aa2.99□□□□□ -1.93
LCB4YOR171C YGL235WP53071 178 aa2.99□□□□□ -1.93
LCB4YOR171C OKP1P53298 406 aa2.99□□□□□ -1.93
LCB4YOR171C YTP1P53584 459 aa2.99□□□□□ -1.93
LCB4YOR171C AFT2Q08957 416 aa2.99□□□□□ -1.93
LCB4YOR171C SFM1Q12314 213 aa2.99□□□□□ -1.93
LCB4YOR171C RPN6Q12377 434 aa2.99□□□□□ -1.93
LCB4YOR171C EMP46Q12396 444 aa2.99□□□□□ -1.93
LCB4YOR171C RMD5Q12508 421 aa2.99□□□□□ -1.93
LCB4YOR171C YKL183C-AQ3E765 70 aa2.99□□□□□ -1.93
LCB4YOR171C TOP2P06786 1428 aaKnown RBP2.99□□□□□ -1.93
LCB4YOR171C MF(ALPHA)1P01149 165 aa2.99□□□□□ -1.93
LCB4YOR171C PUT2P07275 575 aa2.99□□□□□ -1.93
LCB4YOR171C POX1P13711 748 aa2.99□□□□□ -1.93
LCB4YOR171C YMR31P19955 123 aa2.99□□□□□ -1.93
LCB4YOR171C RAD57P25301 460 aa2.99□□□□□ -1.93
LCB4YOR171C NDC1P32500 655 aa2.99□□□□□ -1.93
LCB4YOR171C ECM25P32525 599 aa2.99□□□□□ -1.93
LCB4YOR171C CDC13P32797 924 aaKnown RBP2.99□□□□□ -1.93
LCB4YOR171C CLG1P35190 452 aa2.99□□□□□ -1.93
LCB4YOR171C OLA1P38219 394 aaKnown RBP2.99□□□□□ -1.93
LCB4YOR171C DER1P38307 211 aa2.99□□□□□ -1.93
LCB4YOR171C PCA1P38360 1216 aa2.99□□□□□ -1.93
LCB4YOR171C YER130CP39959 443 aa2.99□□□□□ -1.93
LCB4YOR171C SPG5P42933 373 aa2.99□□□□□ -1.93
LCB4YOR171C SWP82P43554 623 aa2.99□□□□□ -1.93
LCB4YOR171C SHY1P53266 389 aa2.99□□□□□ -1.93
LCB4YOR171C YPR003CP53394 754 aa2.99□□□□□ -1.93
LCB4YOR171C YML108WQ03759 105 aa2.99□□□□□ -1.93
LCB4YOR171C SYO1Q07395 620 aa2.99□□□□□ -1.93
LCB4YOR171C DTD1Q07648 150 aaKnown RBP2.99□□□□□ -1.93
LCB4YOR171C TMS1Q12116 473 aa2.99□□□□□ -1.93
LCB4YOR171C YPL150WQ12152 901 aa2.99□□□□□ -1.93
LCB4YOR171C TPT1Q12272 230 aaKnown RBP2.99□□□□□ -1.93
LCB4YOR171C WTM1Q12363 437 aaKnown RBP2.99□□□□□ -1.93
LCB4YOR171C SNF8Q12483 233 aa2.99□□□□□ -1.93
LCB4YOR171C YDR157WA0A023PZE8 133 aa2.98□□□□□ -1.93
LCB4YOR171C BI2P03873 423 aa2.98□□□□□ -1.93
LCB4YOR171C PUT1P09368 476 aa2.98□□□□□ -1.93
LCB4YOR171C YMR085WP0CF18 432 aa2.98□□□□□ -1.93
LCB4YOR171C COS2P0CX12 379 aa2.98□□□□□ -1.93
LCB4YOR171C COS3P0CX13 379 aa2.98□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms