RNA–Protein interactions for RNA: YNL258C

DSL1, Transcript of Peripheral membrane protein needed for Golgi-to-ER retrograde traffic, yeast

Gene DSL1, Length 2,265 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DSL1	YNL258C	YNK1	P36010	153 aa	Known RBP	3.39	□□□□□ -1.87
DSL1	YNL258C	DTR1	P38125	572 aa		3.39	□□□□□ -1.87
DSL1	YNL258C	YHK8	P38776	514 aa		3.39	□□□□□ -1.87
DSL1	YNL258C	XBP1	P40489	647 aa		3.39	□□□□□ -1.87
DSL1	YNL258C	GCN20	P43535	752 aa	Known RBP	3.39	□□□□□ -1.87
DSL1	YNL258C	EMC2	P47133	292 aa	Known RBP	3.39	□□□□□ -1.87
DSL1	YNL258C	MDM36	Q06820	579 aa		3.39	□□□□□ -1.87
DSL1	YNL258C	SHS1	Q07657	551 aa		3.39	□□□□□ -1.87
DSL1	YNL258C	DSE3	Q08729	430 aa		3.39	□□□□□ -1.87
DSL1	YNL258C	ATG31	Q12421	196 aa		3.39	□□□□□ -1.87
DSL1	YNL258C	RGS2	Q99188	309 aa		3.39	□□□□□ -1.87
DSL1	YNL258C	JIP3	O13555	125 aa		3.38	□□□□□ -1.87
DSL1	YNL258C	ARO4	P32449	370 aa	Known RBP	3.38	□□□□□ -1.87
DSL1	YNL258C	DPH5	P32469	300 aa	Predicted RBP	3.38	□□□□□ -1.87
DSL1	YNL258C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	3.38	□□□□□ -1.87	not detected
DSL1	YNL258C	GEP4	P38812	185 aa		3.38	□□□□□ -1.87
DSL1	YNL258C	ALG8	P40351	577 aa		3.38	□□□□□ -1.87
DSL1	YNL258C	TES1	P41903	349 aa	Known RBP	3.38	□□□□□ -1.87
DSL1	YNL258C	PXR1	P53335	271 aa	Predicted RBP	3.38	□□□□□ -1.87
DSL1	YNL258C	STP1	Q00947	519 aa		3.38	□□□□□ -1.87
DSL1	YNL258C	ATC1	Q04005	294 aa		3.38	□□□□□ -1.87
DSL1	YNL258C	COX20	Q04935	205 aa		3.38	□□□□□ -1.87
DSL1	YNL258C	ARV1	Q06541	321 aa		3.38	□□□□□ -1.87
DSL1	YNL258C	SNX3	Q08826	162 aa	Known RBP	3.38	□□□□□ -1.87
DSL1	YNL258C	ARG80	P07249	177 aa		3.37	□□□□□ -1.87
DSL1	YNL258C	VMA5	P31412	392 aa	Known RBP	3.37	□□□□□ -1.87
DSL1	YNL258C	DED81	P38707	554 aa	Known RBP	3.37	□□□□□ -1.87
DSL1	YNL258C	PCI8	P40512	444 aa		3.37	□□□□□ -1.87
DSL1	YNL258C	TRF5	P48561	642 aa	Known RBP	3.37	□□□□□ -1.87
DSL1	YNL258C	HER2	Q03557	464 aa		3.37	□□□□□ -1.87
DSL1	YNL258C	YDR415C	Q04033	374 aa	Predicted RBP	3.37	□□□□□ -1.87
DSL1	YNL258C	YPL199C	Q08954	240 aa		3.37	□□□□□ -1.87
DSL1	YNL258C	THP3	Q12049	470 aa	Known RBP	3.37	□□□□□ -1.87
DSL1	YNL258C	RUD3	Q12234	484 aa	Known RBP	3.37	□□□□□ -1.87
DSL1	YNL258C	APC2	Q12440	853 aa		3.37	□□□□□ -1.87
DSL1	YNL258C	UBA3	Q99344	299 aa		3.37	□□□□□ -1.87
DSL1	YNL258C	ADH2	P00331	348 aa	Known RBP	3.37	□□□□□ -1.87
DSL1	YNL258C	ATP6	P00854	259 aa		3.37	□□□□□ -1.87
DSL1	YNL258C	KAR9	P32526	644 aa		3.37	□□□□□ -1.87
DSL1	YNL258C	MNS1	P32906	549 aa		3.37	□□□□□ -1.87
DSL1	YNL258C	ATO2	P32907	282 aa		3.37	□□□□□ -1.87
DSL1	YNL258C	MSN4	P33749	630 aa		3.37	□□□□□ -1.87
DSL1	YNL258C	RIB5	P38145	238 aa		3.37	□□□□□ -1.87
DSL1	YNL258C	SMF2	P38778	549 aa		3.37	□□□□□ -1.87
DSL1	YNL258C	CAF40	P53829	373 aa		3.37	□□□□□ -1.87
DSL1	YNL258C	SPP2	Q02521	185 aa		3.37	□□□□□ -1.87
DSL1	YNL258C	RPN6	Q12377	434 aa		3.37	□□□□□ -1.87
DSL1	YNL258C	PTP1	P25044	335 aa		3.36	□□□□□ -1.87
DSL1	YNL258C	PRS1	P32895	427 aa	Known RBP	3.36	□□□□□ -1.87
DSL1	YNL258C	RPH1	P39956	796 aa		3.36	□□□□□ -1.87
DSL1	YNL258C	YIR016W	P40572	265 aa		3.36	□□□□□ -1.87
DSL1	YNL258C	CIN2	P46670	268 aa		3.36	□□□□□ -1.87
DSL1	YNL258C	LSG1	P53145	640 aa	Known RBP	3.36	□□□□□ -1.87
DSL1	YNL258C	LSC1	P53598	329 aa	Known RBP	3.36	□□□□□ -1.87
DSL1	YNL258C	SIA1	Q12212	622 aa		3.36	□□□□□ -1.87
DSL1	YNL258C	CHD1	P32657	1468 aa		3.36	□□□□□ -1.87
DSL1	YNL258C	RPL20A	P0CX23	172 aa	Known RBP	3.36	□□□□□ -1.87
DSL1	YNL258C	RPL20B	P0CX24	172 aa	Predicted RBP	3.36	□□□□□ -1.87
DSL1	YNL258C	MTF1	P14908	341 aa	Known RBP	3.36	□□□□□ -1.87
DSL1	YNL258C	CWP1	P28319	239 aa		3.36	□□□□□ -1.87
DSL1	YNL258C	HIS2	P38635	335 aa		3.36	□□□□□ -1.87
DSL1	YNL258C	TIS11	P47977	285 aa		3.36	□□□□□ -1.87
DSL1	YNL258C	MTM1	P53320	366 aa		3.36	□□□□□ -1.87
DSL1	YNL258C	TDA1	Q03533	586 aa		3.36	□□□□□ -1.87
DSL1	YNL258C	CTS2	Q06350	511 aa		3.36	□□□□□ -1.87
DSL1	YNL258C	SRL1	Q08673	210 aa		3.36	□□□□□ -1.87
DSL1	YNL258C	YPR1	Q12458	312 aa		3.36	□□□□□ -1.87
DSL1	YNL258C	YCR024C-B	Q3E7Z8	88 aa		3.36	□□□□□ -1.87
DSL1	YNL258C	PRB1	P09232	635 aa		3.35	□□□□□ -1.87
DSL1	YNL258C	GCG1	P32656	232 aa	Known RBP	3.35	□□□□□ -1.87
DSL1	YNL258C	YKT6	P36015	200 aa	Known RBP	3.35	□□□□□ -1.87
DSL1	YNL258C	CUE2	P36075	443 aa	Known RBP	3.35	□□□□□ -1.87
DSL1	YNL258C	RCK2	P38623	610 aa		3.35	□□□□□ -1.87
DSL1	YNL258C	RBG1	P39729	369 aa		3.35	□□□□□ -1.87
DSL1	YNL258C	YJL118W	P47022	219 aa		3.35	□□□□□ -1.87
DSL1	YNL258C	IBD2	P53892	351 aa		3.35	□□□□□ -1.87
DSL1	YNL258C	YPL080C	Q02826	108 aa		3.35	□□□□□ -1.87
DSL1	YNL258C	CWC21	Q03375	135 aa	Known RBP	3.35	□□□□□ -1.87
DSL1	YNL258C	FMP42	Q04991	504 aa		3.35	□□□□□ -1.87
DSL1	YNL258C	MUM3	Q08750	479 aa		3.35	□□□□□ -1.87
DSL1	YNL258C	YOL107W	Q12239	342 aa		3.35	□□□□□ -1.87
DSL1	YNL258C	RGT2	Q12300	763 aa		3.35	□□□□□ -1.87
DSL1	YNL258C	HPR1	P17629	752 aa	Known RBP	3.35	□□□□□ -1.87
DSL1	YNL258C	MRP4	P32902	394 aa		3.35	□□□□□ -1.87
DSL1	YNL258C	YBP1	P38315	674 aa		3.35	□□□□□ -1.87
DSL1	YNL258C	RRP3	P38712	501 aa	Known RBP	3.35	□□□□□ -1.87
DSL1	YNL258C	YPT35	P38815	214 aa	Known RBP	3.35	□□□□□ -1.87
DSL1	YNL258C	MET30	P39014	640 aa		3.35	□□□□□ -1.87
DSL1	YNL258C	SHQ1	P40486	507 aa	Predicted RBP	3.35	□□□□□ -1.87
DSL1	YNL258C	YGR210C	P42942	411 aa		3.35	□□□□□ -1.87
DSL1	YNL258C	GOR1	P53839	350 aa		3.35	□□□□□ -1.87
DSL1	YNL258C	KTR6	P54070	446 aa		3.35	□□□□□ -1.87
DSL1	YNL258C	CDC14	Q00684	551 aa		3.35	□□□□□ -1.87
DSL1	YNL258C	APC9	Q12107	265 aa		3.35	□□□□□ -1.87
DSL1	YNL258C	MCT1	Q12283	360 aa		3.35	□□□□□ -1.87
DSL1	YNL258C	RPL24A	P04449	155 aa	Known RBP	3.34	□□□□□ -1.87
DSL1	YNL258C	NTG1	P31378	399 aa		3.34	□□□□□ -1.87
DSL1	YNL258C	FUN26	P31381	517 aa		3.34	□□□□□ -1.87
DSL1	YNL258C	ACB1	P31787	87 aa		3.34	□□□□□ -1.87
DSL1	YNL258C	YHR045W	P38775	560 aa		3.34	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms