RNA–Protein interactions for RNA: YNL223W

ATG4, Transcript of Conserved cysteine protease required for autophagy, yeastyeast

Gene ATG4, Length 1,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG4YNL223W NEJ1Q06148 342 aa5.49□□□□□ -1.53
ATG4YNL223W OPT2Q06593 877 aa5.49□□□□□ -1.53
ATG4YNL223W CRT10Q08226 957 aa5.49□□□□□ -1.53
ATG4YNL223W YOR365CQ08844 703 aa5.49□□□□□ -1.53
ATG4YNL223W YOR389WQ08912 624 aa5.49□□□□□ -1.53
ATG4YNL223W MSH5Q12175 901 aa5.49□□□□□ -1.53
ATG4YNL223W GAL4P04386 881 aa5.48□□□□□ -1.53
ATG4YNL223W YCR100CP25606 316 aa5.48□□□□□ -1.53
ATG4YNL223W VPS51P36116 164 aa5.48□□□□□ -1.53
ATG4YNL223W BET3P36149 193 aa5.48□□□□□ -1.53
ATG4YNL223W MRPL15P36523 253 aa5.48□□□□□ -1.53
ATG4YNL223W UTP25P40498 721 aaKnown RBP5.48□□□□□ -1.53
ATG4YNL223W SMK1P41808 388 aa5.48□□□□□ -1.53
ATG4YNL223W ALB1P47019 175 aaPredicted RBP5.48□□□□□ -1.53
ATG4YNL223W COS1P53822 381 aa5.48□□□□□ -1.53
ATG4YNL223W YKR011CQ02209 353 aa5.48□□□□□ -1.53
ATG4YNL223W INP1Q03694 420 aa5.48□□□□□ -1.53
ATG4YNL223W RRP17Q04031 235 aaPredicted RBP5.48□□□□□ -1.53
ATG4YNL223W MRX10Q05648 414 aa5.48□□□□□ -1.53
ATG4YNL223W ARV1Q06541 321 aa5.48□□□□□ -1.53
ATG4YNL223W YPR174CQ06616 221 aaPredicted RBP5.48□□□□□ -1.53
ATG4YNL223W YDL114WQ07530 308 aa5.48□□□□□ -1.53
ATG4YNL223W RBD2Q12270 262 aa5.48□□□□□ -1.53
ATG4YNL223W YOR214CQ12282 236 aa5.48□□□□□ -1.53
ATG4YNL223W IES3Q12345 250 aa5.48□□□□□ -1.53
ATG4YNL223W REP1P03871 373 aa5.47□□□□□ -1.53
ATG4YNL223W YOL162WP0CF19 215 aa5.47□□□□□ -1.53
ATG4YNL223W BAR1P12630 587 aa5.47□□□□□ -1.53
ATG4YNL223W MDH1P17505 334 aaKnown RBP RIP-Chip data5.47□□□□□ -1.53not detected
ATG4YNL223W SNF6P18888 332 aa5.47□□□□□ -1.53
ATG4YNL223W ARC19P33204 171 aaKnown RBP5.47□□□□□ -1.53
ATG4YNL223W ECM15P35195 104 aa5.47□□□□□ -1.53
ATG4YNL223W TPO5P36029 618 aa5.47□□□□□ -1.53
ATG4YNL223W PEX18P38855 283 aa5.47□□□□□ -1.53
ATG4YNL223W MDM31P38880 579 aa5.47□□□□□ -1.53
ATG4YNL223W DDI1P40087 428 aa5.47□□□□□ -1.53
ATG4YNL223W NTA1P40354 457 aa5.47□□□□□ -1.53
ATG4YNL223W ICE2P40499 491 aa5.47□□□□□ -1.53
ATG4YNL223W SSY5P47002 699 aa5.47□□□□□ -1.53
ATG4YNL223W RBG2P53295 368 aaKnown RBP5.47□□□□□ -1.53
ATG4YNL223W DBP6P53734 629 aaKnown RBP5.47□□□□□ -1.53
ATG4YNL223W ASI1P54074 624 aa5.47□□□□□ -1.53
ATG4YNL223W SNZ1Q03148 297 aa5.47□□□□□ -1.53
ATG4YNL223W ELP6Q04868 273 aa5.47□□□□□ -1.53
ATG4YNL223W CDA2Q06703 312 aa5.47□□□□□ -1.53
ATG4YNL223W SPC3Q12133 184 aa5.47□□□□□ -1.53
ATG4YNL223W TPO4Q12256 659 aa5.47□□□□□ -1.53
ATG4YNL223W AI1P03875 834 aa5.46□□□□□ -1.53
ATG4YNL223W MET2P08465 486 aa5.46□□□□□ -1.53
ATG4YNL223W SAC7P17121 654 aa5.46□□□□□ -1.53
ATG4YNL223W STP22P25604 385 aa5.46□□□□□ -1.53
ATG4YNL223W NDC1P32500 655 aa5.46□□□□□ -1.53
ATG4YNL223W KAP122P32767 1081 aa5.46□□□□□ -1.53
ATG4YNL223W ORC2P32833 620 aa5.46□□□□□ -1.53
ATG4YNL223W TAF14P35189 244 aa5.46□□□□□ -1.53
ATG4YNL223W YKL077WP36081 392 aa5.46□□□□□ -1.53
ATG4YNL223W AMN1P38285 549 aaPredicted RBP5.46□□□□□ -1.53
ATG4YNL223W GDI1P39958 451 aaKnown RBP5.46□□□□□ -1.53
ATG4YNL223W ZRG8P40021 1076 aa5.46□□□□□ -1.53
ATG4YNL223W IRC7P43623 340 aa5.46□□□□□ -1.53
ATG4YNL223W TRM9P49957 279 aa5.46□□□□□ -1.53
ATG4YNL223W YGR266WP53326 701 aa5.46□□□□□ -1.53
ATG4YNL223W NRM1P53718 249 aa5.46□□□□□ -1.53
ATG4YNL223W TFB3Q03290 321 aa5.46□□□□□ -1.53
ATG4YNL223W MAK3Q03503 176 aa5.46□□□□□ -1.53
ATG4YNL223W SIZ1Q04195 904 aa5.46□□□□□ -1.53
ATG4YNL223W YMR087WQ04299 284 aa5.46□□□□□ -1.53
ATG4YNL223W ERB1Q04660 807 aaKnown RBP5.46□□□□□ -1.53
ATG4YNL223W YLR456WQ06199 204 aa5.46□□□□□ -1.53
ATG4YNL223W MDM36Q06820 579 aa5.46□□□□□ -1.53
ATG4YNL223W YPL191CQ08930 360 aa5.46□□□□□ -1.53
ATG4YNL223W DPM1P14020 267 aaKnown RBP5.45□□□□□ -1.54
ATG4YNL223W KGD1P20967 1014 aaKnown RBP5.45□□□□□ -1.54
ATG4YNL223W GPI12P23797 304 aa5.45□□□□□ -1.54
ATG4YNL223W PBN1P25580 416 aa5.45□□□□□ -1.54
ATG4YNL223W SNU114P36048 1008 aaKnown RBP5.45□□□□□ -1.54
ATG4YNL223W FMP23P38231 175 aa5.45□□□□□ -1.54
ATG4YNL223W RTC2P38279 296 aa5.45□□□□□ -1.54
ATG4YNL223W AIM10P39965 576 aaKnown RBP5.45□□□□□ -1.54
ATG4YNL223W JLP2P40206 208 aa5.45□□□□□ -1.54
ATG4YNL223W SPG5P42933 373 aa5.45□□□□□ -1.54
ATG4YNL223W APS3P47064 194 aa5.45□□□□□ -1.54
ATG4YNL223W BUD17P53727 317 aa5.45□□□□□ -1.54
ATG4YNL223W SNP1Q00916 300 aaPredicted RBP5.45□□□□□ -1.54
ATG4YNL223W OST6Q03723 332 aa5.45□□□□□ -1.54
ATG4YNL223W FIN1Q03898 291 aa5.45□□□□□ -1.54
ATG4YNL223W GPI17Q04080 534 aa5.45□□□□□ -1.54
ATG4YNL223W URC2Q04411 772 aa5.45□□□□□ -1.54
ATG4YNL223W SEC13Q04491 297 aaKnown RBP5.45□□□□□ -1.54
ATG4YNL223W VID22Q05934 901 aa5.45□□□□□ -1.54
ATG4YNL223W YLR040CQ07988 224 aa5.45□□□□□ -1.54
ATG4YNL223W BRX1Q08235 291 aaKnown RBP5.45□□□□□ -1.54
ATG4YNL223W UIP4Q08926 304 aa5.45□□□□□ -1.54
ATG4YNL223W YDR061WQ12298 539 aa5.45□□□□□ -1.54
ATG4YNL223W APC2Q12440 853 aa5.45□□□□□ -1.54
ATG4YNL223W DET1Q99288 334 aaKnown RBP5.45□□□□□ -1.54
ATG4YNL223W RPL20AP0CX23 172 aaKnown RBP5.45□□□□□ -1.54
ATG4YNL223W RPL20BP0CX24 172 aaPredicted RBP5.45□□□□□ -1.54
ATG4YNL223W ERD1P16151 362 aa5.45□□□□□ -1.54
ATG4YNL223W SBA1P28707 216 aaKnown RBP5.45□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms