RNA–Protein interactions for RNA: YMR183C

SSO2, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO2, Length 888 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO2YMR183C YOR029WQ12243 111 aa3.47□□□□□ -1.85
SSO2YMR183C RKM5Q12367 367 aa3.47□□□□□ -1.85
SSO2YMR183C XRN1P22147 1528 aaKnown RBP3.46□□□□□ -1.86
SSO2YMR183C JIP3O13555 125 aa3.46□□□□□ -1.86
SSO2YMR183C TDH2P00358 332 aaKnown RBP3.46□□□□□ -1.86
SSO2YMR183C COX2P00410 251 aa3.46□□□□□ -1.86
SSO2YMR183C MATALPHA1P0CY06 175 aa3.46□□□□□ -1.86
SSO2YMR183C HMLALPHA1P0CY07 175 aa3.46□□□□□ -1.86
SSO2YMR183C FRS2P15625 503 aaKnown RBP3.46□□□□□ -1.86
SSO2YMR183C CTR86P25355 563 aa3.46□□□□□ -1.86
SSO2YMR183C VMA5P31412 392 aaKnown RBP3.46□□□□□ -1.86
SSO2YMR183C UTR4P32626 227 aa3.46□□□□□ -1.86
SSO2YMR183C COS9P36034 407 aa3.46□□□□□ -1.86
SSO2YMR183C YHR182WP38870 785 aa3.46□□□□□ -1.86
SSO2YMR183C PRM9P39551 298 aa3.46□□□□□ -1.86
SSO2YMR183C ISC1P40015 477 aaKnown RBP3.46□□□□□ -1.86
SSO2YMR183C SSN8P47821 323 aa3.46□□□□□ -1.86
SSO2YMR183C EFM5P53200 248 aaKnown RBP3.46□□□□□ -1.86
SSO2YMR183C YNL234WP53857 426 aa3.46□□□□□ -1.86
SSO2YMR183C SLT2Q00772 484 aa3.46□□□□□ -1.86
SSO2YMR183C CTL1Q03220 320 aaKnown RBP3.46□□□□□ -1.86
SSO2YMR183C UBX2Q04228 584 aa3.46□□□□□ -1.86
SSO2YMR183C GMC2Q06201 188 aa3.46□□□□□ -1.86
SSO2YMR183C PAM18Q07914 168 aa3.46□□□□□ -1.86
SSO2YMR183C RAX1Q08760 435 aa3.46□□□□□ -1.86
SSO2YMR183C SIA1Q12212 622 aa3.46□□□□□ -1.86
SSO2YMR183C ADH2P00331 348 aaKnown RBP3.45□□□□□ -1.86
SSO2YMR183C NHP6BP11633 99 aaKnown RBP3.45□□□□□ -1.86
SSO2YMR183C MAS2P11914 482 aa3.45□□□□□ -1.86
SSO2YMR183C PRP16P15938 1071 aaPredicted RBP3.45□□□□□ -1.86
SSO2YMR183C COQ1P18900 473 aa3.45□□□□□ -1.86
SSO2YMR183C RRT12P25381 491 aa3.45□□□□□ -1.86
SSO2YMR183C RPS2P25443 254 aaKnown RBP3.45□□□□□ -1.86
SSO2YMR183C POP5P28005 173 aa3.45□□□□□ -1.86
SSO2YMR183C PPA2P28239 310 aa3.45□□□□□ -1.86
SSO2YMR183C ITR1P30605 584 aa3.45□□□□□ -1.86
SSO2YMR183C ZUO1P32527 433 aaKnown RBP3.45□□□□□ -1.86
SSO2YMR183C MRPS5P33759 307 aa3.45□□□□□ -1.86
SSO2YMR183C YKL097CP34245 136 aa3.45□□□□□ -1.86
SSO2YMR183C FMP46P36141 133 aaKnown RBP3.45□□□□□ -1.86
SSO2YMR183C YCR041WP37265 110 aa3.45□□□□□ -1.86
SSO2YMR183C RIM2P38127 377 aa3.45□□□□□ -1.86
SSO2YMR183C HIS2P38635 335 aa3.45□□□□□ -1.86
SSO2YMR183C PHO90P39535 881 aa3.45□□□□□ -1.86
SSO2YMR183C YAR1P46683 200 aa3.45□□□□□ -1.86
SSO2YMR183C HIT1P46973 164 aa3.45□□□□□ -1.86
SSO2YMR183C COX16P47081 118 aa3.45□□□□□ -1.86
SSO2YMR183C AIM24P47127 394 aa3.45□□□□□ -1.86
SSO2YMR183C TOS2P50078 622 aa3.45□□□□□ -1.86
SSO2YMR183C YIP1P53039 248 aa3.45□□□□□ -1.86
SSO2YMR183C MRPL50P53724 139 aa3.45□□□□□ -1.86
SSO2YMR183C ENT5Q03769 411 aaKnown RBP3.45□□□□□ -1.86
SSO2YMR183C NAT4Q04751 285 aa3.45□□□□□ -1.86
SSO2YMR183C ADH6Q04894 360 aaKnown RBP3.45□□□□□ -1.86
SSO2YMR183C YLR283WQ05867 314 aa3.45□□□□□ -1.86
SSO2YMR183C DIC1Q06143 298 aa3.45□□□□□ -1.86
SSO2YMR183C YPQ1Q12010 308 aa3.45□□□□□ -1.86
SSO2YMR183C GET4Q12125 312 aa3.45□□□□□ -1.86
SSO2YMR183C YCF1P39109 1515 aaKnown RBP3.44□□□□□ -1.86
SSO2YMR183C HEM2P05373 342 aa3.44□□□□□ -1.86
SSO2YMR183C NOP1P15646 327 aaKnown RBP3.44□□□□□ -1.86
SSO2YMR183C YPK2P18961 677 aa3.44□□□□□ -1.86
SSO2YMR183C VPS1P21576 704 aaKnown RBP3.44□□□□□ -1.86
SSO2YMR183C YCR007CP25354 239 aa3.44□□□□□ -1.86
SSO2YMR183C BUB3P26449 341 aa3.44□□□□□ -1.86
SSO2YMR183C SEC1P30619 724 aaKnown RBP3.44□□□□□ -1.86
SSO2YMR183C ZIP1P31111 875 aa3.44□□□□□ -1.86
SSO2YMR183C VAM7P32912 316 aa3.44□□□□□ -1.86
SSO2YMR183C PDR3P33200 976 aa3.44□□□□□ -1.86
SSO2YMR183C AIM29P36154 155 aa3.44□□□□□ -1.86
SSO2YMR183C BIG1P38813 335 aa3.44□□□□□ -1.86
SSO2YMR183C LYS1P38998 373 aaRIP-Chip data3.44□□□□□ -1.86 RIP-Chip
SSO2YMR183C FHL1P39521 936 aa3.44□□□□□ -1.86
SSO2YMR183C YHB1P39676 399 aaKnown RBP3.44□□□□□ -1.86
SSO2YMR183C SHO1P40073 367 aa3.44□□□□□ -1.86
SSO2YMR183C NAS6P50086 228 aa3.44□□□□□ -1.86
SSO2YMR183C YMR209CQ03648 457 aa3.44□□□□□ -1.86
SSO2YMR183C GLO2Q05584 274 aa3.44□□□□□ -1.86
SSO2YMR183C BER1Q06688 274 aaKnown RBP3.44□□□□□ -1.86
SSO2YMR183C SGT1Q08446 395 aa3.44□□□□□ -1.86
SSO2YMR183C SKI7Q08491 747 aaPredicted RBP3.44□□□□□ -1.86
SSO2YMR183C IKI3Q06706 1349 aaKnown RBP3.44□□□□□ -1.86
SSO2YMR183C RHO1P06780 209 aaKnown RBP3.43□□□□□ -1.86
SSO2YMR183C ATP1P07251 545 aaKnown RBP3.43□□□□□ -1.86
SSO2YMR183C MRP1P10662 321 aaKnown RBP3.43□□□□□ -1.86
SSO2YMR183C UTR1P21373 530 aa3.43□□□□□ -1.86
SSO2YMR183C MRPL8P22353 238 aa3.43□□□□□ -1.86
SSO2YMR183C PUT3P25502 979 aaPredicted RBP3.43□□□□□ -1.86
SSO2YMR183C PBN1P25580 416 aa3.43□□□□□ -1.86
SSO2YMR183C YNK1P36010 153 aaKnown RBP3.43□□□□□ -1.86
SSO2YMR183C LDB7P38210 180 aa3.43□□□□□ -1.86
SSO2YMR183C PFS1P38872 237 aa3.43□□□□□ -1.86
SSO2YMR183C FAA2P39518 744 aa3.43□□□□□ -1.86
SSO2YMR183C RFC4P40339 323 aaKnown RBP3.43□□□□□ -1.86
SSO2YMR183C HAM1P47119 197 aaKnown RBP3.43□□□□□ -1.86
SSO2YMR183C SEH1P53011 349 aaKnown RBP3.43□□□□□ -1.86
SSO2YMR183C TAF6P53040 516 aa3.43□□□□□ -1.86
SSO2YMR183C BIO4P53630 237 aa3.43□□□□□ -1.86
SSO2YMR183C NOP13P53883 403 aaKnown RBP RIP-Chip data3.43□□□□□ -1.86not detected
SSO2YMR183C RLI1Q03195 608 aaKnown RBP3.43□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms