RNA–Protein interactions for RNA: YLR440C

SEC39, Transcript of Component of the Dsl1p tethering complex, yeast

Gene SEC39, Length 2,130 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC39	YLR440C	YMR253C	Q04835	414 aa		4.75	□□□□□ -1.65
SEC39	YLR440C	YPL199C	Q08954	240 aa		4.75	□□□□□ -1.65
SEC39	YLR440C	RIM20	Q12033	661 aa		4.75	□□□□□ -1.65
SEC39	YLR440C	POM33	Q12164	279 aa		4.75	□□□□□ -1.65
SEC39	YLR440C	YPT1	P01123	206 aa	Known RBP	4.75	□□□□□ -1.65
SEC39	YLR440C	RPS28B	P0C0X0	67 aa	Known RBP	4.75	□□□□□ -1.65
SEC39	YLR440C	ERD2	P18414	219 aa		4.75	□□□□□ -1.65
SEC39	YLR440C	PRE1	P22141	198 aa	Known RBP	4.75	□□□□□ -1.65
SEC39	YLR440C	KIN82	P25341	720 aa		4.75	□□□□□ -1.65
SEC39	YLR440C	DEG1	P31115	442 aa	Known RBP	4.75	□□□□□ -1.65
SEC39	YLR440C	LST4	P34239	828 aa		4.75	□□□□□ -1.65
SEC39	YLR440C	MRPL4	P36517	319 aa		4.75	□□□□□ -1.65
SEC39	YLR440C	YBR139W	P38109	508 aa		4.75	□□□□□ -1.65
SEC39	YLR440C	ERG7	P38604	731 aa		4.75	□□□□□ -1.65
SEC39	YLR440C	PFS1	P38872	237 aa		4.75	□□□□□ -1.65
SEC39	YLR440C	YEL057C	P39983	233 aa		4.75	□□□□□ -1.65
SEC39	YLR440C	FAU1	P40099	211 aa		4.75	□□□□□ -1.65
SEC39	YLR440C	YIL067C	P40514	678 aa		4.75	□□□□□ -1.65
SEC39	YLR440C	SFH5	P47008	294 aa		4.75	□□□□□ -1.65
SEC39	YLR440C	ADO1	P47143	340 aa	Known RBP	4.75	□□□□□ -1.65
SEC39	YLR440C	GND2	P53319	492 aa		4.75	□□□□□ -1.65
SEC39	YLR440C	ERG5	P54781	538 aa		4.75	□□□□□ -1.65
SEC39	YLR440C	MTD1	Q02046	320 aa	Known RBP	4.75	□□□□□ -1.65
SEC39	YLR440C	DAL4	Q04895	635 aa		4.75	□□□□□ -1.65
SEC39	YLR440C	RRP45	Q05636	305 aa	Known RBP	4.75	□□□□□ -1.65
SEC39	YLR440C	DUS4	Q06063	367 aa		4.75	□□□□□ -1.65
SEC39	YLR440C	ATG33	Q06485	197 aa		4.75	□□□□□ -1.65
SEC39	YLR440C	YET3	Q07451	203 aa		4.75	□□□□□ -1.65
SEC39	YLR440C	AAD15	Q08361	143 aa		4.75	□□□□□ -1.65
SEC39	YLR440C	FEX2	Q08991	375 aa		4.75	□□□□□ -1.65
SEC39	YLR440C	FCY22	Q12119	530 aa		4.75	□□□□□ -1.65
SEC39	YLR440C	TRM13	Q12383	476 aa		4.75	□□□□□ -1.65
SEC39	YLR440C	SLO1	Q3E784	85 aa		4.75	□□□□□ -1.65
SEC39	YLR440C	RPS28A	Q3E7X9	67 aa	Predicted RBP	4.75	□□□□□ -1.65
SEC39	YLR440C	YCL012C	Q8J0M4	134 aa		4.75	□□□□□ -1.65
SEC39	YLR440C	HBN1	Q96VH4	193 aa		4.75	□□□□□ -1.65
SEC39	YLR440C	VCX1	Q99385	411 aa		4.75	□□□□□ -1.65
SEC39	YLR440C	THP2	O13539	261 aa	Known RBP	4.74	□□□□□ -1.65
SEC39	YLR440C	YBR121C-A	P0C5L4	52 aa		4.74	□□□□□ -1.65
SEC39	YLR440C	IDP1	P21954	428 aa	Known RBP	4.74	□□□□□ -1.65
SEC39	YLR440C	SCM4	P32564	187 aa		4.74	□□□□□ -1.65
SEC39	YLR440C	ASH1	P34233	588 aa		4.74	□□□□□ -1.65
SEC39	YLR440C	TCM62	P38228	572 aa	Known RBP	4.74	□□□□□ -1.65
SEC39	YLR440C	PRS3	P38689	320 aa	Known RBP	4.74	□□□□□ -1.65
SEC39	YLR440C	ELO3	P40319	345 aa		4.74	□□□□□ -1.65
SEC39	YLR440C	PFK26	P40433	827 aa	Known RBP	4.74	□□□□□ -1.65
SEC39	YLR440C	SLS1	P42900	643 aa		4.74	□□□□□ -1.65
SEC39	YLR440C	HOC1	P47124	396 aa		4.74	□□□□□ -1.65
SEC39	YLR440C	PMT5	P52867	743 aa		4.74	□□□□□ -1.65
SEC39	YLR440C	YTP1	P53584	459 aa		4.74	□□□□□ -1.65
SEC39	YLR440C	NOG2	P53742	486 aa	Known RBP	4.74	□□□□□ -1.65
SEC39	YLR440C	GPI17	Q04080	534 aa		4.74	□□□□□ -1.65
SEC39	YLR440C	YDR391C	Q04170	232 aa		4.74	□□□□□ -1.65
SEC39	YLR440C	SMA2	Q04658	369 aa		4.74	□□□□□ -1.65
SEC39	YLR440C	SYC1	Q08553	188 aa	Predicted RBP	4.74	□□□□□ -1.65
SEC39	YLR440C	DAP1	Q12091	152 aa		4.74	□□□□□ -1.65
SEC39	YLR440C	DCP1	Q12517	231 aa	Predicted RBP	4.74	□□□□□ -1.65
SEC39	YLR440C	TSC13	Q99190	310 aa		4.74	□□□□□ -1.65
SEC39	YLR440C	RPP0	P05317	312 aa	Known RBP	4.73	□□□□□ -1.65
SEC39	YLR440C	ATP1	P07251	545 aa	Known RBP	4.73	□□□□□ -1.65
SEC39	YLR440C	IMA3	P0CW40	589 aa		4.73	□□□□□ -1.65
SEC39	YLR440C	IMA4	P0CW41	589 aa		4.73	□□□□□ -1.65
SEC39	YLR440C	NAM2	P11325	894 aa		4.73	□□□□□ -1.65
SEC39	YLR440C	CCA1	P21269	546 aa		4.73	□□□□□ -1.65
SEC39	YLR440C	AHC2	P25649	128 aa		4.73	□□□□□ -1.65
SEC39	YLR440C	VMA5	P31412	392 aa	Known RBP	4.73	□□□□□ -1.65
SEC39	YLR440C	RML2	P32611	393 aa		4.73	□□□□□ -1.65
SEC39	YLR440C	YPT7	P32939	208 aa		4.73	□□□□□ -1.65
SEC39	YLR440C	THI2	P38141	450 aa		4.73	□□□□□ -1.65
SEC39	YLR440C	LDB7	P38210	180 aa		4.73	□□□□□ -1.65
SEC39	YLR440C	END3	P39013	349 aa		4.73	□□□□□ -1.65
SEC39	YLR440C	PGD1	P40356	397 aa		4.73	□□□□□ -1.65
SEC39	YLR440C	ASG7	P46993	209 aa		4.73	□□□□□ -1.65
SEC39	YLR440C	ECM27	P47144	725 aa		4.73	□□□□□ -1.65
SEC39	YLR440C	ERV14	P53173	138 aa		4.73	□□□□□ -1.65
SEC39	YLR440C	FMP48	P53233	369 aa		4.73	□□□□□ -1.65
SEC39	YLR440C	YLR460C	P54007	376 aa		4.73	□□□□□ -1.65
SEC39	YLR440C	YPR196W	Q06595	470 aa		4.73	□□□□□ -1.65
SEC39	YLR440C	BER1	Q06688	274 aa	Known RBP	4.73	□□□□□ -1.65
SEC39	YLR440C	YFH1	Q07540	174 aa		4.73	□□□□□ -1.65
SEC39	YLR440C	IMA2	Q08295	589 aa		4.73	□□□□□ -1.65
SEC39	YLR440C	YOR238W	Q08634	303 aa		4.73	□□□□□ -1.65
SEC39	YLR440C	YIR021W-A	Q3E739	70 aa		4.73	□□□□□ -1.65
SEC39	YLR440C	PUT1	P09368	476 aa		4.73	□□□□□ -1.65
SEC39	YLR440C	DDI2	P0CH63	225 aa		4.73	□□□□□ -1.65
SEC39	YLR440C	DDI3	P0CH64	225 aa		4.73	□□□□□ -1.65
SEC39	YLR440C	BET2	P20133	325 aa		4.73	□□□□□ -1.65
SEC39	YLR440C	RPS1B	P23248	255 aa	Known RBP	4.73	□□□□□ -1.65
SEC39	YLR440C	DGR2	P32330	852 aa		4.73	□□□□□ -1.65
SEC39	YLR440C	ISF1	P32488	338 aa		4.73	□□□□□ -1.65
SEC39	YLR440C	SKT5	P34226	696 aa		4.73	□□□□□ -1.65
SEC39	YLR440C	EFM1	P38732	585 aa		4.73	□□□□□ -1.65
SEC39	YLR440C	GPI16	P38875	610 aa		4.73	□□□□□ -1.65
SEC39	YLR440C	DHH1	P39517	506 aa	Known RBP	4.73	□□□□□ -1.65
SEC39	YLR440C	YHC3	P47040	408 aa		4.73	□□□□□ -1.65
SEC39	YLR440C	BIT61	P47041	543 aa		4.73	□□□□□ -1.65
SEC39	YLR440C	BNA2	P47125	453 aa		4.73	□□□□□ -1.65
SEC39	YLR440C	RIB4	P50861	169 aa	Predicted RBP	4.73	□□□□□ -1.65
SEC39	YLR440C	ATP25	Q03153	612 aa		4.73	□□□□□ -1.65
SEC39	YLR440C	RKM2	Q03942	479 aa		4.73	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms