RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C CMS1Q07897 291 aaKnown RBP1.35□□□□□ -2.19
RPL40BYKR094C LOT6Q07923 191 aa1.35□□□□□ -2.19
RPL40BYKR094C YOL075CQ08234 1294 aa1.35□□□□□ -2.19
RPL40BYKR094C RNH203Q12338 110 aa1.35□□□□□ -2.19
RPL40BYKR094C HIF1Q12373 385 aa1.35□□□□□ -2.19
RPL40BYKR094C YOP1Q12402 180 aa1.35□□□□□ -2.19
RPL40BYKR094C EAF3Q12432 401 aa1.35□□□□□ -2.19
RPL40BYKR094C PFK27Q12471 397 aaPredicted RBP1.35□□□□□ -2.19
RPL40BYKR094C RGS2Q99188 309 aa1.35□□□□□ -2.19
RPL40BYKR094C PIS1P06197 220 aaKnown RBP1.34□□□□□ -2.19
RPL40BYKR094C RPC40P07703 335 aaKnown RBP1.34□□□□□ -2.19
RPL40BYKR094C EFB1P32471 206 aaKnown RBP1.34□□□□□ -2.19
RPL40BYKR094C SSE1P32589 693 aaKnown RBP1.34□□□□□ -2.19
RPL40BYKR094C YEF1P32622 495 aa1.34□□□□□ -2.19
RPL40BYKR094C RAD5P32849 1169 aaPredicted RBP1.34□□□□□ -2.19
RPL40BYKR094C ECM8P38246 354 aa1.34□□□□□ -2.19
RPL40BYKR094C GEP4P38812 185 aa1.34□□□□□ -2.19
RPL40BYKR094C YHR182WP38870 785 aa1.34□□□□□ -2.19
RPL40BYKR094C ALP1P38971 573 aa1.34□□□□□ -2.19
RPL40BYKR094C END3P39013 349 aa1.34□□□□□ -2.19
RPL40BYKR094C PRP39P39682 629 aaKnown RBP1.34□□□□□ -2.19
RPL40BYKR094C PCL7P40186 285 aa1.34□□□□□ -2.19
RPL40BYKR094C LYS12P40495 371 aaKnown RBP1.34□□□□□ -2.19
RPL40BYKR094C HAC1P41546 238 aa1.34□□□□□ -2.19
RPL40BYKR094C STE24P47154 453 aa1.34□□□□□ -2.19
RPL40BYKR094C EFM3P47163 339 aa1.34□□□□□ -2.19
RPL40BYKR094C SHE4P51534 789 aa1.34□□□□□ -2.19
RPL40BYKR094C MST27P53176 234 aa1.34□□□□□ -2.19
RPL40BYKR094C UTP6Q02354 440 aaKnown RBP1.34□□□□□ -2.19
RPL40BYKR094C YMR102CQ03177 834 aa1.34□□□□□ -2.19
RPL40BYKR094C PRM6Q04705 352 aa1.34□□□□□ -2.19
RPL40BYKR094C RTN1Q04947 295 aaKnown RBP1.34□□□□□ -2.19
RPL40BYKR094C NOP6Q07623 225 aaKnown RBP1.34□□□□□ -2.19
RPL40BYKR094C SHS1Q07657 551 aa1.34□□□□□ -2.19
RPL40BYKR094C APC5Q08683 685 aa1.34□□□□□ -2.19
RPL40BYKR094C RAX1Q08760 435 aa1.34□□□□□ -2.19
RPL40BYKR094C YGK3Q12222 375 aaPredicted RBP1.34□□□□□ -2.19
RPL40BYKR094C YIL002W-AQ3E7Z5 69 aa1.34□□□□□ -2.19
RPL40BYKR094C FSH3Q99369 266 aa1.34□□□□□ -2.19
RPL40BYKR094C CDC37P06101 506 aaKnown RBP1.33□□□□□ -2.2
RPL40BYKR094C RNR2P09938 399 aaKnown RBP1.33□□□□□ -2.2
RPL40BYKR094C RNA1P11745 407 aaKnown RBP1.33□□□□□ -2.2
RPL40BYKR094C GCD2P12754 651 aaPredicted RBP1.33□□□□□ -2.2
RPL40BYKR094C CAP2P13517 287 aa1.33□□□□□ -2.2
RPL40BYKR094C PUT4P15380 627 aa1.33□□□□□ -2.2
RPL40BYKR094C SAG1P20840 650 aa1.33□□□□□ -2.2
RPL40BYKR094C HXT2P23585 541 aa1.33□□□□□ -2.2
RPL40BYKR094C EXG1P23776 448 aaKnown RBP1.33□□□□□ -2.2
RPL40BYKR094C DBR1P24309 405 aaKnown RBP1.33□□□□□ -2.2
RPL40BYKR094C DAL80P26343 269 aa1.33□□□□□ -2.2
RPL40BYKR094C SUR1P33300 382 aa1.33□□□□□ -2.2
RPL40BYKR094C MCR1P36060 302 aaKnown RBP1.33□□□□□ -2.2
RPL40BYKR094C YHK8P38776 514 aa1.33□□□□□ -2.2
RPL40BYKR094C YHR177WP38867 453 aa1.33□□□□□ -2.2
RPL40BYKR094C YDR089WP38966 869 aa1.33□□□□□ -2.2
RPL40BYKR094C SSO2P39926 295 aa1.33□□□□□ -2.2
RPL40BYKR094C NAS2P40555 220 aa1.33□□□□□ -2.2
RPL40BYKR094C SEC27P41811 889 aaKnown RBP1.33□□□□□ -2.2
RPL40BYKR094C YFR018CP43599 363 aa1.33□□□□□ -2.2
RPL40BYKR094C CPR7P47103 393 aa1.33□□□□□ -2.2
RPL40BYKR094C AIM24P47127 394 aa1.33□□□□□ -2.2
RPL40BYKR094C GPI8P49018 411 aa1.33□□□□□ -2.2
RPL40BYKR094C RPN14P53196 417 aa1.33□□□□□ -2.2
RPL40BYKR094C CWC22P53333 577 aaKnown RBP1.33□□□□□ -2.2
RPL40BYKR094C SMP3Q04174 516 aa1.33□□□□□ -2.2
RPL40BYKR094C YMR111CQ04461 462 aaPredicted RBP1.33□□□□□ -2.2
RPL40BYKR094C AIM33Q04516 312 aa1.33□□□□□ -2.2
RPL40BYKR094C BUR2Q05949 395 aa1.33□□□□□ -2.2
RPL40BYKR094C SNT309Q06091 175 aaPredicted RBP1.33□□□□□ -2.2
RPL40BYKR094C YPR078CQ06813 372 aa1.33□□□□□ -2.2
RPL40BYKR094C SMC5Q08204 1093 aa1.33□□□□□ -2.2
RPL40BYKR094C HMS1Q12398 434 aa1.33□□□□□ -2.2
RPL40BYKR094C PCL9Q12477 304 aa1.33□□□□□ -2.2
RPL40BYKR094C MEX67Q99257 599 aaKnown RBP1.33□□□□□ -2.2
RPL40BYKR094C YOR338WQ99326 363 aa1.33□□□□□ -2.2
RPL40BYKR094C PAB1P04147 577 aaKnown RBP RIP-Chip data1.32□□□□□ -2.2 RIP-Chip
RPL40BYKR094C GAL7P08431 366 aa1.32□□□□□ -2.2
RPL40BYKR094C GAL3P13045 520 aa1.32□□□□□ -2.2
RPL40BYKR094C SAR1P20606 190 aaKnown RBP1.32□□□□□ -2.2
RPL40BYKR094C PET18P25362 215 aa1.32□□□□□ -2.2
RPL40BYKR094C AGA2P32781 87 aa1.32□□□□□ -2.2
RPL40BYKR094C CYM1P32898 989 aa1.32□□□□□ -2.2
RPL40BYKR094C ECT1P33412 323 aa1.32□□□□□ -2.2
RPL40BYKR094C TIR2P33890 251 aa1.32□□□□□ -2.2
RPL40BYKR094C EBP2P36049 427 aaKnown RBP1.32□□□□□ -2.2
RPL40BYKR094C MRPL40P36534 297 aa1.32□□□□□ -2.2
RPL40BYKR094C YMR262WP38430 313 aa1.32□□□□□ -2.2
RPL40BYKR094C RBG1P39729 369 aa1.32□□□□□ -2.2
RPL40BYKR094C AIP1P46680 615 aaKnown RBP1.32□□□□□ -2.2
RPL40BYKR094C LCB3P47013 409 aa1.32□□□□□ -2.2
RPL40BYKR094C YJR030CP47101 745 aa1.32□□□□□ -2.2
RPL40BYKR094C PMT5P52867 743 aa1.32□□□□□ -2.2
RPL40BYKR094C MRM2P53123 320 aa1.32□□□□□ -2.2
RPL40BYKR094C RET3P53600 189 aa1.32□□□□□ -2.2
RPL40BYKR094C MDM36Q06820 579 aa1.32□□□□□ -2.2
RPL40BYKR094C YOR012WQ12351 137 aa1.32□□□□□ -2.2
RPL40BYKR094C SPO24Q3E752 67 aa1.32□□□□□ -2.2
RPL40BYKR094C VPS63O13549 108 aa1.31□□□□□ -2.2
RPL40BYKR094C CBP2P03874 630 aaPredicted RBP1.31□□□□□ -2.2
RPL40BYKR094C SSC1P0CS90 654 aaKnown RBP1.31□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms