RNA–Protein interactions for RNA: YKR037C

SPC34, Transcript of Essential subunit of the Dam1 complex (aka DASH complex), yeast

Gene SPC34, Length 888 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPC34	YKR037C	YJL070C	P40361	888 aa		4.58	□□□□□ -1.68
SPC34	YKR037C	PAC11	P40960	533 aa		4.58	□□□□□ -1.68
SPC34	YKR037C	RPA34	P47006	233 aa	Predicted RBP	4.58	□□□□□ -1.68
SPC34	YKR037C	RTT102	P53330	157 aa		4.58	□□□□□ -1.68
SPC34	YKR037C	RPM2	Q02773	1202 aa		4.58	□□□□□ -1.68
SPC34	YKR037C	STD1	Q02794	444 aa		4.58	□□□□□ -1.68
SPC34	YKR037C	PIR3	Q03180	325 aa		4.58	□□□□□ -1.68
SPC34	YKR037C	MMT1	Q03218	510 aa		4.58	□□□□□ -1.68
SPC34	YKR037C	TIM18	Q08749	192 aa		4.58	□□□□□ -1.68
SPC34	YKR037C	RMD5	Q12508	421 aa		4.58	□□□□□ -1.68
SPC34	YKR037C	ILV1	P00927	576 aa	Known RBP	4.57	□□□□□ -1.68
SPC34	YKR037C	TEF1	P02994	458 aa	Known RBP	4.57	□□□□□ -1.68
SPC34	YKR037C	STE3	P06783	470 aa		4.57	□□□□□ -1.68
SPC34	YKR037C	SPO12	P17123	173 aa		4.57	□□□□□ -1.68
SPC34	YKR037C	LDB16	P25587	256 aa		4.57	□□□□□ -1.68
SPC34	YKR037C	TIP1	P27654	210 aa	Predicted RBP	4.57	□□□□□ -1.68
SPC34	YKR037C	PRR1	P28708	518 aa		4.57	□□□□□ -1.68
SPC34	YKR037C	SHE4	P51534	789 aa		4.57	□□□□□ -1.68
SPC34	YKR037C	YNR048W	P53740	393 aa		4.57	□□□□□ -1.68
SPC34	YKR037C	YNR068C	P53754	272 aa		4.57	□□□□□ -1.68
SPC34	YKR037C	UTP6	Q02354	440 aa	Known RBP	4.57	□□□□□ -1.68
SPC34	YKR037C	SRL1	Q08673	210 aa		4.57	□□□□□ -1.68
SPC34	YKR037C	YPL199C	Q08954	240 aa		4.57	□□□□□ -1.68
SPC34	YKR037C	RGT2	Q12300	763 aa		4.57	□□□□□ -1.68
SPC34	YKR037C	OPI3	P05375	206 aa		4.56	□□□□□ -1.68
SPC34	YKR037C	MRS3	P10566	314 aa		4.56	□□□□□ -1.68
SPC34	YKR037C	SLM5	P25345	492 aa	Known RBP	4.56	□□□□□ -1.68
SPC34	YKR037C	CWP1	P28319	239 aa		4.56	□□□□□ -1.68
SPC34	YKR037C	MTC4	P38335	694 aa	Known RBP	4.56	□□□□□ -1.68
SPC34	YKR037C	RTT101	P47050	842 aa		4.56	□□□□□ -1.68
SPC34	YKR037C	VEL1	P53058	206 aa		4.56	□□□□□ -1.68
SPC34	YKR037C	AIM33	Q04516	312 aa		4.56	□□□□□ -1.68
SPC34	YKR037C	PRM6	Q04705	352 aa		4.56	□□□□□ -1.68
SPC34	YKR037C	RNH203	Q12338	110 aa		4.56	□□□□□ -1.68
SPC34	YKR037C	PRP16	P15938	1071 aa	Predicted RBP	4.55	□□□□□ -1.68
SPC34	YKR037C	RDS1	P25611	832 aa		4.55	□□□□□ -1.68
SPC34	YKR037C	ITR1	P30605	584 aa		4.55	□□□□□ -1.68
SPC34	YKR037C	COT1	P32798	439 aa		4.55	□□□□□ -1.68
SPC34	YKR037C	SKN1	P33336	771 aa		4.55	□□□□□ -1.68
SPC34	YKR037C	PMU1	P36069	295 aa		4.55	□□□□□ -1.68
SPC34	YKR037C	DHH1	P39517	506 aa	Known RBP	4.55	□□□□□ -1.68
SPC34	YKR037C	RRT5	P43607	289 aa		4.55	□□□□□ -1.68
SPC34	YKR037C	CIS3	P47001	227 aa		4.55	□□□□□ -1.68
SPC34	YKR037C	SSN8	P47821	323 aa		4.55	□□□□□ -1.68
SPC34	YKR037C	PRM1	P53835	661 aa		4.55	□□□□□ -1.68
SPC34	YKR037C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
SPC34	YKR037C	MPS1	P54199	764 aa		4.55	□□□□□ -1.68
SPC34	YKR037C	MRP51	Q02950	344 aa		4.55	□□□□□ -1.68
SPC34	YKR037C	RRP9	Q06506	573 aa	Known RBP	4.55	□□□□□ -1.68
SPC34	YKR037C	YAP7	Q08182	245 aa		4.55	□□□□□ -1.68
SPC34	YKR037C	SAM4	Q08985	325 aa	Known RBP	4.55	□□□□□ -1.68
SPC34	YKR037C	RPL20A	P0CX23	172 aa	Known RBP	4.54	□□□□□ -1.68
SPC34	YKR037C	RPL20B	P0CX24	172 aa	Predicted RBP	4.54	□□□□□ -1.68
SPC34	YKR037C	TCP1	P12612	559 aa	Known RBP	4.54	□□□□□ -1.68
SPC34	YKR037C	CDC23	P16522	626 aa		4.54	□□□□□ -1.68
SPC34	YKR037C	ATG15	P25641	520 aa		4.54	□□□□□ -1.68
SPC34	YKR037C	SEC1	P30619	724 aa	Known RBP	4.54	□□□□□ -1.68
SPC34	YKR037C	ATS1	P31386	333 aa		4.54	□□□□□ -1.68
SPC34	YKR037C	TKL2	P33315	681 aa		4.54	□□□□□ -1.68
SPC34	YKR037C	SHE3	P38272	425 aa	Known RBP	4.54	□□□□□ -1.68
SPC34	YKR037C	MSG5	P38590	489 aa		4.54	□□□□□ -1.68
SPC34	YKR037C	MST28	P39552	234 aa		4.54	□□□□□ -1.68
SPC34	YKR037C	EFM3	P47163	339 aa		4.54	□□□□□ -1.68
SPC34	YKR037C	VHS1	Q03785	461 aa		4.54	□□□□□ -1.68
SPC34	YKR037C	NUP53	Q03790	475 aa		4.54	□□□□□ -1.68
SPC34	YKR037C	GPM2	Q12008	311 aa		4.54	□□□□□ -1.68
SPC34	YKR037C	SRL2	Q12020	392 aa		4.54	□□□□□ -1.68
SPC34	YKR037C	AYT1	Q12226	474 aa		4.54	□□□□□ -1.68
SPC34	YKR037C	SFG1	Q12507	346 aa		4.54	□□□□□ -1.68
SPC34	YKR037C	RPL15A	P05748	204 aa	Known RBP	4.53	□□□□□ -1.68
SPC34	YKR037C	PSO2	P30620	661 aa		4.53	□□□□□ -1.68
SPC34	YKR037C	SUR1	P33300	382 aa		4.53	□□□□□ -1.68
SPC34	YKR037C	ATP3	P38077	311 aa	Known RBP	4.53	□□□□□ -1.68
SPC34	YKR037C	YHR177W	P38867	453 aa		4.53	□□□□□ -1.68
SPC34	YKR037C	SHQ1	P40486	507 aa	Predicted RBP	4.53	□□□□□ -1.68
SPC34	YKR037C	RPR2	P40571	144 aa		4.53	□□□□□ -1.68
SPC34	YKR037C	ASG7	P46993	209 aa		4.53	□□□□□ -1.68
SPC34	YKR037C	GPI8	P49018	411 aa		4.53	□□□□□ -1.68
SPC34	YKR037C	MPS2	P53159	387 aa		4.53	□□□□□ -1.68
SPC34	YKR037C	HST1	P53685	503 aa		4.53	□□□□□ -1.68
SPC34	YKR037C	YPL113C	Q02961	396 aa		4.53	□□□□□ -1.68
SPC34	YKR037C	URC2	Q04411	772 aa		4.53	□□□□□ -1.68
SPC34	YKR037C	NOP6	Q07623	225 aa	Known RBP	4.53	□□□□□ -1.68
SPC34	YKR037C	SHS1	Q07657	551 aa		4.53	□□□□□ -1.68
SPC34	YKR037C	SET6	Q12529	373 aa		4.53	□□□□□ -1.68
SPC34	YKR037C	RPL12A	P0CX53	165 aa	Known RBP	4.52	□□□□□ -1.69
SPC34	YKR037C	RPL12B	P0CX54	165 aa		4.52	□□□□□ -1.69
SPC34	YKR037C	ATR1	P13090	542 aa		4.52	□□□□□ -1.69
SPC34	YKR037C	SLY1	P22213	666 aa		4.52	□□□□□ -1.69
SPC34	YKR037C	SRB2	P34162	210 aa		4.52	□□□□□ -1.69
SPC34	YKR037C	GAA1	P39012	614 aa		4.52	□□□□□ -1.69
SPC34	YKR037C	AVT2	P39981	480 aa		4.52	□□□□□ -1.69
SPC34	YKR037C	PMT5	P52867	743 aa		4.52	□□□□□ -1.69
SPC34	YKR037C	SHE10	P53075	577 aa		4.52	□□□□□ -1.69
SPC34	YKR037C	CAF40	P53829	373 aa		4.52	□□□□□ -1.69
SPC34	YKR037C	YML122C	Q03207	126 aa		4.52	□□□□□ -1.69
SPC34	YKR037C	MGR3	Q04472	501 aa		4.52	□□□□□ -1.69
SPC34	YKR037C	SMA2	Q04658	369 aa		4.52	□□□□□ -1.69
SPC34	YKR037C	ERP1	Q05359	219 aa	Known RBP	4.52	□□□□□ -1.69
SPC34	YKR037C	AAD15	Q08361	143 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 20 ms