RNA–Protein interactions for RNA: YJR001W

AVT1, Transcript of Vacuolar transporter, yeast

Gene AVT1, Length 1,809 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AVT1	YJR001W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
AVT1	YJR001W	YJL206C	P39529	758 aa		4.19	□□□□□ -1.74
AVT1	YJR001W	YMR147W	P40218	223 aa	Known RBP	4.19	□□□□□ -1.74
AVT1	YJR001W	TOS3	P43637	560 aa		4.19	□□□□□ -1.74
AVT1	YJR001W	FMP33	P46998	180 aa		4.19	□□□□□ -1.74
AVT1	YJR001W	RPC17	P47076	161 aa		4.19	□□□□□ -1.74
AVT1	YJR001W	UFD1	P53044	361 aa		4.19	□□□□□ -1.74
AVT1	YJR001W	TMA20	P89886	181 aa	Predicted RBP	4.19	□□□□□ -1.74
AVT1	YJR001W	ARL3	Q02804	198 aa		4.19	□□□□□ -1.74
AVT1	YJR001W	VHS1	Q03785	461 aa		4.19	□□□□□ -1.74
AVT1	YJR001W	ARR3	Q06598	404 aa		4.19	□□□□□ -1.74
AVT1	YJR001W	BTS1	Q12051	335 aa		4.19	□□□□□ -1.74
AVT1	YJR001W	APC9	Q12107	265 aa		4.19	□□□□□ -1.74
AVT1	YJR001W	PET20	Q99373	253 aa		4.19	□□□□□ -1.74
AVT1	YJR001W	CDC21	P06785	304 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	ADE5,7	P07244	802 aa	Known RBP	4.18	□□□□□ -1.74
AVT1	YJR001W	YMR085W	P0CF18	432 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	ZWF1	P11412	505 aa	Known RBP	4.18	□□□□□ -1.74
AVT1	YJR001W	REV1	P12689	985 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	MET16	P18408	261 aa	Predicted RBP	4.18	□□□□□ -1.74
AVT1	YJR001W	SLY1	P22213	666 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	ATG22	P25568	528 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	PMI40	P29952	429 aa	Known RBP	4.18	□□□□□ -1.74
AVT1	YJR001W	YBR144C	P34215	104 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	CSG2	P35206	410 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	YCR087C-A	P37263	153 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	RFS1	P38234	210 aa	Known RBP	4.18	□□□□□ -1.74
AVT1	YJR001W	SAP30	P38429	201 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	YHR078W	P38799	552 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	NVJ1	P38881	321 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	AIM18	P38884	321 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	ICP55	P40051	511 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	PAC11	P40960	533 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	PFA3	P42836	336 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	YAR1	P46683	200 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	ASN2	P49090	572 aa	Known RBP	4.18	□□□□□ -1.74
AVT1	YJR001W	IMO32	P53219	342 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	YAT1	P80235	687 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	RHO3	Q00245	231 aa	Known RBP	4.18	□□□□□ -1.74
AVT1	YJR001W	TIM44	Q01852	431 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	DOT1	Q04089	582 aa	Known RBP	4.18	□□□□□ -1.74
AVT1	YJR001W	MYO5	Q04439	1219 aa	Known RBP	4.18	□□□□□ -1.74
AVT1	YJR001W	NEJ1	Q06148	342 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	IPK1	Q06667	281 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	LDB18	Q07887	179 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	YRA1	Q12159	226 aa	Known RBP	4.18	□□□□□ -1.74
AVT1	YJR001W	EMP46	Q12396	444 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	RRD2	Q12461	358 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	TRP4	P07285	380 aa	Predicted RBP	4.18	□□□□□ -1.74
AVT1	YJR001W	ABF1	P14164	731 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	FRS2	P15625	503 aa	Known RBP	4.18	□□□□□ -1.74
AVT1	YJR001W	CHA1	P25379	360 aa	Known RBP	4.18	□□□□□ -1.74
AVT1	YJR001W	RPS5	P26783	225 aa	Known RBP	4.18	□□□□□ -1.74
AVT1	YJR001W	PPA2	P28239	310 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	RIM1	P32445	135 aa	Known RBP	4.18	□□□□□ -1.74
AVT1	YJR001W	SPS19	P32573	292 aa	Known RBP	4.18	□□□□□ -1.74
AVT1	YJR001W	FRE1	P32791	686 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	EMP70	P32802	667 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	ECT1	P33412	323 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	RPS1A	P33442	255 aa	Known RBP	4.18	□□□□□ -1.74
AVT1	YJR001W	ECM13	P38195	257 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	AIM3	P38266	947 aa	Known RBP	4.18	□□□□□ -1.74
AVT1	YJR001W	YHR112C	P38716	378 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	PCF11	P39081	626 aa	Predicted RBP	4.18	□□□□□ -1.74
AVT1	YJR001W	PRP39	P39682	629 aa	Known RBP	4.18	□□□□□ -1.74
AVT1	YJR001W	RMD6	P39975	231 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	CSM2	P40465	213 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	OYE3	P41816	400 aa	Predicted RBP	4.18	□□□□□ -1.74
AVT1	YJR001W	RPE1	P46969	238 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	YJL163C	P46996	555 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	YJL118W	P47022	219 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	DPB11	P47027	764 aa	Predicted RBP	4.18	□□□□□ -1.74
AVT1	YJR001W	YJR149W	P47177	404 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	NBP1	P52919	319 aa	Predicted RBP	4.18	□□□□□ -1.74
AVT1	YJR001W	YNL260C	P53846	198 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	EFM6	P53970	246 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	DID2	P69771	204 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	ELP3	Q02908	557 aa	Known RBP	4.18	□□□□□ -1.74
AVT1	YJR001W	TPP1	Q03796	238 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	NKP2	Q06162	153 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	YOR223W	Q12015	292 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	NSL1	Q12143	216 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
AVT1	YJR001W	ATG34	Q12292	412 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	POM34	Q12445	299 aa		4.18	□□□□□ -1.74
AVT1	YJR001W	RPO26	P20435	155 aa		4.17	□□□□□ -1.74
AVT1	YJR001W	HXT2	P23585	541 aa		4.17	□□□□□ -1.74
AVT1	YJR001W	PRE7	P23724	241 aa	Known RBP	4.17	□□□□□ -1.74
AVT1	YJR001W	KIN82	P25341	720 aa		4.17	□□□□□ -1.74
AVT1	YJR001W	DCC1	P25559	380 aa		4.17	□□□□□ -1.74
AVT1	YJR001W	PMT2	P31382	759 aa		4.17	□□□□□ -1.74
AVT1	YJR001W	YPS1	P32329	569 aa		4.17	□□□□□ -1.74
AVT1	YJR001W	CDC13	P32797	924 aa	Known RBP	4.17	□□□□□ -1.74
AVT1	YJR001W	SOF1	P33750	489 aa	Known RBP	4.17	□□□□□ -1.74
AVT1	YJR001W	MCH2	P36032	473 aa		4.17	□□□□□ -1.74
AVT1	YJR001W	RIB5	P38145	238 aa		4.17	□□□□□ -1.74
AVT1	YJR001W	YBR259W	P38338	688 aa		4.17	□□□□□ -1.74
AVT1	YJR001W	PCA1	P38360	1216 aa		4.17	□□□□□ -1.74
AVT1	YJR001W	PRE3	P38624	215 aa		4.17	□□□□□ -1.74
AVT1	YJR001W	SEO1	P39709	593 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms