RNA–Protein interactions for RNA: YJL154C

VPS35, Transcript of Endosomal subunit of membrane-associated retromer complex, yeastyeast

Gene VPS35, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS35YJL154C YER078W-AQ3E7A2 54 aa1.88□□□□□ -2.11
VPS35YJL154C STE24P47154 453 aa1.88□□□□□ -2.11
VPS35YJL154C KEL2P50090 882 aa1.88□□□□□ -2.11
VPS35YJL154C SHE10P53075 577 aa1.88□□□□□ -2.11
VPS35YJL154C YMR310CQ04867 317 aaPredicted RBP1.88□□□□□ -2.11
VPS35YJL154C PAL1Q05518 499 aaKnown RBP1.88□□□□□ -2.11
VPS35YJL154C IRC25Q07951 179 aa1.88□□□□□ -2.11
VPS35YJL154C SMC5Q08204 1093 aa1.88□□□□□ -2.11
VPS35YJL154C HMS1Q12398 434 aa1.88□□□□□ -2.11
VPS35YJL154C RPL12AP0CX53 165 aaKnown RBP1.87□□□□□ -2.11
VPS35YJL154C RPL12BP0CX54 165 aa1.87□□□□□ -2.11
VPS35YJL154C SCH9P11792 824 aaKnown RBP1.87□□□□□ -2.11
VPS35YJL154C UBA1P22515 1024 aaKnown RBP1.87□□□□□ -2.11
VPS35YJL154C RPL5P26321 297 aaKnown RBP1.87□□□□□ -2.11
VPS35YJL154C YKL097CP34245 136 aa1.87□□□□□ -2.11
VPS35YJL154C AIM20P40451 204 aa1.87□□□□□ -2.11
VPS35YJL154C CHS6P40955 746 aa1.87□□□□□ -2.11
VPS35YJL154C YGR210CP42942 411 aa1.87□□□□□ -2.11
VPS35YJL154C YFR057WP43625 151 aa1.87□□□□□ -2.11
VPS35YJL154C AIM24P47127 394 aa1.87□□□□□ -2.11
VPS35YJL154C YMR102CQ03177 834 aa1.87□□□□□ -2.11
VPS35YJL154C SMD2Q06217 110 aaKnown RBP1.87□□□□□ -2.11
VPS35YJL154C DBP9Q06218 594 aaKnown RBP1.87□□□□□ -2.11
VPS35YJL154C VPS13Q07878 3144 aa1.87□□□□□ -2.11
VPS35YJL154C PAB1P04147 577 aaKnown RBP RIP-Chip data1.87□□□□□ -2.11not detected
VPS35YJL154C MRPL8P22353 238 aa1.87□□□□□ -2.11
VPS35YJL154C NAM9P27929 486 aa1.87□□□□□ -2.11
VPS35YJL154C YBR137WP38276 179 aa1.87□□□□□ -2.11
VPS35YJL154C HSM3P38348 480 aa1.87□□□□□ -2.11
VPS35YJL154C YPI1P43587 155 aa1.87□□□□□ -2.11
VPS35YJL154C LCB3P47013 409 aa1.87□□□□□ -2.11
VPS35YJL154C CWC21Q03375 135 aaKnown RBP1.87□□□□□ -2.11
VPS35YJL154C CLP1Q08685 445 aaPredicted RBP1.87□□□□□ -2.11
VPS35YJL154C PCL9Q12477 304 aa1.87□□□□□ -2.11
VPS35YJL154C CLN3P13365 580 aa1.86□□□□□ -2.11
VPS35YJL154C MRPL25P23369 157 aa1.86□□□□□ -2.11
VPS35YJL154C MRPL10P36520 322 aa1.86□□□□□ -2.11
VPS35YJL154C SIF2P38262 535 aa1.86□□□□□ -2.11
VPS35YJL154C SBE22P38814 852 aa1.86□□□□□ -2.11
VPS35YJL154C BOR1P53838 576 aa1.86□□□□□ -2.11
VPS35YJL154C RTN1Q04947 295 aaKnown RBP1.86□□□□□ -2.11
VPS35YJL154C ERV2Q12284 196 aa1.86□□□□□ -2.11
VPS35YJL154C YCR024C-BQ3E7Z8 88 aa1.86□□□□□ -2.11
VPS35YJL154C MEX67Q99257 599 aaKnown RBP1.86□□□□□ -2.11
VPS35YJL154C RRP5Q05022 1729 aaKnown RBP1.86□□□□□ -2.11
VPS35YJL154C MAS1P10507 462 aa1.86□□□□□ -2.11
VPS35YJL154C PSO2P30620 661 aa1.86□□□□□ -2.11
VPS35YJL154C FAA1P30624 700 aaKnown RBP1.86□□□□□ -2.11
VPS35YJL154C MCR1P36060 302 aaKnown RBP1.86□□□□□ -2.11
VPS35YJL154C YBR139WP38109 508 aa1.86□□□□□ -2.11
VPS35YJL154C ADH5P38113 351 aaKnown RBP1.86□□□□□ -2.11
VPS35YJL154C AVT5P38176 459 aa1.86□□□□□ -2.11
VPS35YJL154C YHR182WP38870 785 aa1.86□□□□□ -2.11
VPS35YJL154C YNL208WP40159 199 aaKnown RBP1.86□□□□□ -2.11
VPS35YJL154C PAN6P40459 309 aa1.86□□□□□ -2.11
VPS35YJL154C SIM1P40472 476 aa1.86□□□□□ -2.11
VPS35YJL154C HST1P53685 503 aa1.86□□□□□ -2.11
VPS35YJL154C SCW10Q04951 389 aa1.86□□□□□ -2.11
VPS35YJL154C REX3Q12090 404 aa1.86□□□□□ -2.11
VPS35YJL154C FAB1P34756 2278 aa1.86□□□□□ -2.11
VPS35YJL154C VMA2P16140 517 aaKnown RBP1.85□□□□□ -2.11
VPS35YJL154C MER1P16523 270 aa1.85□□□□□ -2.11
VPS35YJL154C RVS161P25343 265 aaKnown RBP1.85□□□□□ -2.11
VPS35YJL154C MSK1P32048 576 aa1.85□□□□□ -2.11
VPS35YJL154C HMX1P32339 317 aa1.85□□□□□ -2.11
VPS35YJL154C EFB1P32471 206 aaKnown RBP1.85□□□□□ -2.11
VPS35YJL154C RIB7P33312 244 aa1.85□□□□□ -2.11
VPS35YJL154C RPC37P36121 282 aa1.85□□□□□ -2.11
VPS35YJL154C YER034WP40022 185 aaKnown RBP1.85□□□□□ -2.11
VPS35YJL154C PCL7P40186 285 aa1.85□□□□□ -2.11
VPS35YJL154C LYS12P40495 371 aaKnown RBP1.85□□□□□ -2.11
VPS35YJL154C BIR1P47134 954 aa1.85□□□□□ -2.11
VPS35YJL154C PMT5P52867 743 aa1.85□□□□□ -2.11
VPS35YJL154C YNR068CP53754 272 aa1.85□□□□□ -2.11
VPS35YJL154C RRB1Q04225 511 aaKnown RBP1.85□□□□□ -2.11
VPS35YJL154C ATG38Q05789 226 aaKnown RBP1.85□□□□□ -2.11
VPS35YJL154C RIF2Q06208 395 aa1.85□□□□□ -2.11
VPS35YJL154C SHS1Q07657 551 aa1.85□□□□□ -2.11
VPS35YJL154C YGK3Q12222 375 aaPredicted RBP1.85□□□□□ -2.11
VPS35YJL154C APC2Q12440 853 aa1.85□□□□□ -2.11
VPS35YJL154C ROM2P51862 1356 aaKnown RBP1.85□□□□□ -2.11
VPS35YJL154C CYC3P06182 269 aa1.85□□□□□ -2.11
VPS35YJL154C RPC40P07703 335 aaKnown RBP1.85□□□□□ -2.11
VPS35YJL154C SSC1P0CS90 654 aaKnown RBP1.85□□□□□ -2.11
VPS35YJL154C TAL1P15019 335 aaKnown RBP1.85□□□□□ -2.11
VPS35YJL154C POT1P27796 417 aaKnown RBP RIP-Chip data1.85□□□□□ -2.11not detected
VPS35YJL154C YEL043WP32618 956 aa1.85□□□□□ -2.11
VPS35YJL154C PPQ1P32945 549 aa1.85□□□□□ -2.11
VPS35YJL154C TIR2P33890 251 aa1.85□□□□□ -2.11
VPS35YJL154C MSG5P38590 489 aa1.85□□□□□ -2.11
VPS35YJL154C MTM1P53320 366 aa1.85□□□□□ -2.11
VPS35YJL154C YNL146WP53906 100 aa1.85□□□□□ -2.11
VPS35YJL154C RSA1Q08932 381 aa1.85□□□□□ -2.11
VPS35YJL154C JID1Q12350 301 aa1.85□□□□□ -2.11
VPS35YJL154C STE3P06783 470 aa1.85□□□□□ -2.11
VPS35YJL154C MSI1P13712 422 aa1.85□□□□□ -2.11
VPS35YJL154C THR4P16120 514 aaKnown RBP1.85□□□□□ -2.11
VPS35YJL154C DAP2P18962 818 aa1.85□□□□□ -2.11
VPS35YJL154C PRR1P28708 518 aa1.85□□□□□ -2.11
VPS35YJL154C DPH5P32469 300 aaPredicted RBP1.85□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 102.4 ms