RNA–Protein interactions for RNA: YIR006C

PAN1, Transcript of Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, yeastyeast

Gene PAN1, Length 4,443 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAN1YIR006C DAP2P18962 818 aa4.42□□□□□ -1.7
PAN1YIR006C SCL1P21243 252 aaKnown RBP4.42□□□□□ -1.7
PAN1YIR006C YCK1P23291 538 aa4.42□□□□□ -1.7
PAN1YIR006C PHO3P24031 467 aa4.42□□□□□ -1.7
PAN1YIR006C HCM1P25364 564 aa4.42□□□□□ -1.7
PAN1YIR006C ACB1P31787 87 aa4.42□□□□□ -1.7
PAN1YIR006C DTR1P38125 572 aa4.42□□□□□ -1.7
PAN1YIR006C VBA2P38358 474 aaKnown RBP4.42□□□□□ -1.7
PAN1YIR006C LEU5P38702 357 aa4.42□□□□□ -1.7
PAN1YIR006C PEX28P38848 579 aa4.42□□□□□ -1.7
PAN1YIR006C RPL10P41805 221 aaKnown RBP4.42□□□□□ -1.7
PAN1YIR006C SRB7P47822 140 aa4.42□□□□□ -1.7
PAN1YIR006C RNH70P53331 553 aa4.42□□□□□ -1.7
PAN1YIR006C PET494P07390 489 aaPredicted RBP4.41□□□□□ -1.7
PAN1YIR006C ZRC1P20107 442 aa4.41□□□□□ -1.7
PAN1YIR006C MCK1P21965 375 aaKnown RBP4.41□□□□□ -1.7
PAN1YIR006C DBP2P24783 546 aaKnown RBP4.41□□□□□ -1.7
PAN1YIR006C TRX3P25372 127 aa4.41□□□□□ -1.7
PAN1YIR006C BOS1P25385 244 aa4.41□□□□□ -1.7
PAN1YIR006C MRP17P28778 131 aa4.41□□□□□ -1.7
PAN1YIR006C SUA5P32579 426 aa4.41□□□□□ -1.7
PAN1YIR006C DSS4P32601 143 aa4.41□□□□□ -1.7
PAN1YIR006C MSN2P33748 704 aa4.41□□□□□ -1.7
PAN1YIR006C HXT5P38695 592 aa4.41□□□□□ -1.7
PAN1YIR006C DED81P38707 554 aaKnown RBP4.41□□□□□ -1.7
PAN1YIR006C AIM10P39965 576 aaKnown RBP4.41□□□□□ -1.7
PAN1YIR006C NUP57P48837 541 aa4.41□□□□□ -1.7
PAN1YIR006C MTM1P53320 366 aa4.41□□□□□ -1.7
PAN1YIR006C RNY1Q02933 434 aaKnown RBP4.41□□□□□ -1.7
PAN1YIR006C ATG10Q07879 167 aa4.41□□□□□ -1.7
PAN1YIR006C YDR524C-BQ3E6R4 66 aa4.41□□□□□ -1.7
PAN1YIR006C SOD2P00447 233 aa4.41□□□□□ -1.7
PAN1YIR006C SIR2P06700 562 aa4.41□□□□□ -1.7
PAN1YIR006C MRP1P10662 321 aaKnown RBP4.41□□□□□ -1.7
PAN1YIR006C CPR2P23285 205 aa4.41□□□□□ -1.7
PAN1YIR006C MGR1P25573 417 aa4.41□□□□□ -1.7
PAN1YIR006C YHR112CP38716 378 aa4.41□□□□□ -1.7
PAN1YIR006C RRF1P38771 230 aa4.41□□□□□ -1.7
PAN1YIR006C TIF11P38912 153 aaKnown RBP4.41□□□□□ -1.7
PAN1YIR006C MRH4P53166 561 aa4.41□□□□□ -1.7
PAN1YIR006C YGR015CP53208 328 aa4.41□□□□□ -1.7
PAN1YIR006C KAP120Q02932 1032 aa4.41□□□□□ -1.7
PAN1YIR006C MRPS17Q03246 237 aaPredicted RBP4.41□□□□□ -1.7
PAN1YIR006C YML018CQ03730 393 aa4.41□□□□□ -1.7
PAN1YIR006C YDR131CQ03899 556 aa4.41□□□□□ -1.7
PAN1YIR006C CAB5Q03941 241 aa4.41□□□□□ -1.7
PAN1YIR006C NOC4Q06512 552 aaPredicted RBP4.41□□□□□ -1.7
PAN1YIR006C SKI7Q08491 747 aaPredicted RBP4.41□□□□□ -1.7
PAN1YIR006C WTM1Q12363 437 aaKnown RBP4.41□□□□□ -1.7
PAN1YIR006C FMP16Q12497 93 aa4.41□□□□□ -1.7
PAN1YIR006C FSH3Q99369 266 aa4.41□□□□□ -1.7
PAN1YIR006C MYO1P08964 1928 aa4.41□□□□□ -1.7
PAN1YIR006C SAC7P17121 654 aa4.41□□□□□ -1.7
PAN1YIR006C STE4P18851 423 aa4.41□□□□□ -1.7
PAN1YIR006C SIP1P32578 815 aa4.41□□□□□ -1.7
PAN1YIR006C VAM7P32912 316 aa4.41□□□□□ -1.7
PAN1YIR006C SHE1P38200 338 aa4.41□□□□□ -1.7
PAN1YIR006C MBA1P38300 278 aa4.41□□□□□ -1.7
PAN1YIR006C FAA4P47912 694 aaKnown RBP4.41□□□□□ -1.7
PAN1YIR006C ATH1P48016 1211 aa4.41□□□□□ -1.7
PAN1YIR006C SGF73P53165 657 aa4.41□□□□□ -1.7
PAN1YIR006C YGR042WP53227 271 aa4.41□□□□□ -1.7
PAN1YIR006C SNO4Q04902 237 aa4.41□□□□□ -1.7
PAN1YIR006C ARV1Q06541 321 aa4.41□□□□□ -1.7
PAN1YIR006C HSP33Q08914 237 aaKnown RBP4.41□□□□□ -1.7
PAN1YIR006C HSP32Q08992 237 aa4.41□□□□□ -1.7
PAN1YIR006C BTS1Q12051 335 aa4.41□□□□□ -1.7
PAN1YIR006C UPC2Q12151 913 aa4.41□□□□□ -1.7
PAN1YIR006C SIA1Q12212 622 aa4.41□□□□□ -1.7
PAN1YIR006C TPO4Q12256 659 aa4.41□□□□□ -1.7
PAN1YIR006C WHI5Q12416 295 aa4.41□□□□□ -1.7
PAN1YIR006C FPS1P23900 669 aa4.41□□□□□ -1.7
PAN1YIR006C PUB1P32588 453 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
PAN1YIR006C ALG3P38179 458 aa4.41□□□□□ -1.7
PAN1YIR006C ECM34P38728 170 aa4.41□□□□□ -1.7
PAN1YIR006C YHR122WP38829 231 aa4.41□□□□□ -1.7
PAN1YIR006C ALP1P38971 573 aa4.41□□□□□ -1.7
PAN1YIR006C BAP3P41815 604 aa4.41□□□□□ -1.7
PAN1YIR006C TRM9P49957 279 aa4.41□□□□□ -1.7
PAN1YIR006C UFD1P53044 361 aa4.41□□□□□ -1.7
PAN1YIR006C VPS73P53142 486 aaKnown RBP4.41□□□□□ -1.7
PAN1YIR006C NNT1Q05874 261 aa4.41□□□□□ -1.7
PAN1YIR006C PEX30Q06169 523 aa4.41□□□□□ -1.7
PAN1YIR006C YOL019WQ08157 551 aa4.41□□□□□ -1.7
PAN1YIR006C NBA1Q08229 501 aaKnown RBP4.41□□□□□ -1.7
PAN1YIR006C REX4Q08237 289 aa4.41□□□□□ -1.7
PAN1YIR006C GPB1Q08886 897 aa4.41□□□□□ -1.7
PAN1YIR006C MOD5P07884 428 aa4.4□□□□□ -1.7
PAN1YIR006C TFS1P14306 219 aa4.4□□□□□ -1.7
PAN1YIR006C ACH1P32316 526 aa4.4□□□□□ -1.7
PAN1YIR006C DCG1P32460 244 aa4.4□□□□□ -1.7
PAN1YIR006C SLC1P33333 303 aa4.4□□□□□ -1.7
PAN1YIR006C CHK1P38147 527 aa4.4□□□□□ -1.7
PAN1YIR006C PFS2P42841 465 aaKnown RBP4.4□□□□□ -1.7
PAN1YIR006C PGA1P53896 198 aa4.4□□□□□ -1.7
PAN1YIR006C RTT103Q05543 409 aa4.4□□□□□ -1.7
PAN1YIR006C BUR2Q05949 395 aa4.4□□□□□ -1.7
PAN1YIR006C AIM6Q07716 390 aa4.4□□□□□ -1.7
PAN1YIR006C TEN1Q07921 160 aa4.4□□□□□ -1.7
PAN1YIR006C SUT2Q12286 268 aa4.4□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms