RNA–Protein interactions for RNA: YHR153C

SPO16, Transcript of Meiosis-specific protein involved in synaptonemal complex assembly, yeastyeast

Gene SPO16, Length 597 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO16YHR153C SMF3Q12078 473 aaPredicted RBP4.02□□□□□ -1.77
SPO16YHR153C RBD2Q12270 262 aa4.02□□□□□ -1.77
SPO16YHR153C AHC1Q12433 566 aa4.02□□□□□ -1.77
SPO16YHR153C PCL9Q12477 304 aa4.02□□□□□ -1.77
SPO16YHR153C YBT1P32386 1661 aa4.01□□□□□ -1.77
SPO16YHR153C SPR1P32603 445 aa4.01□□□□□ -1.77
SPO16YHR153C LAS1P36146 502 aaPredicted RBP4.01□□□□□ -1.77
SPO16YHR153C GPX2P38143 162 aa4.01□□□□□ -1.77
SPO16YHR153C UTP18P40362 594 aaPredicted RBP4.01□□□□□ -1.77
SPO16YHR153C BIR1P47134 954 aa4.01□□□□□ -1.77
SPO16YHR153C TDA1Q03533 586 aa4.01□□□□□ -1.77
SPO16YHR153C PEX27Q08580 376 aa4.01□□□□□ -1.77
SPO16YHR153C NAT1P12945 854 aaKnown RBP4□□□□□ -1.77
SPO16YHR153C AAT2P23542 418 aaKnown RBP4□□□□□ -1.77
SPO16YHR153C DPH2P32461 534 aa4□□□□□ -1.77
SPO16YHR153C EFB1P32471 206 aaKnown RBP4□□□□□ -1.77
SPO16YHR153C TIR2P33890 251 aa4□□□□□ -1.77
SPO16YHR153C MRPL10P36520 322 aa4□□□□□ -1.77
SPO16YHR153C RTC2P38279 296 aa4□□□□□ -1.77
SPO16YHR153C YHR177WP38867 453 aa4□□□□□ -1.77
SPO16YHR153C GAB1P41733 394 aa4□□□□□ -1.77
SPO16YHR153C RPA34P47006 233 aaPredicted RBP4□□□□□ -1.77
SPO16YHR153C MHR1Q06630 226 aa4□□□□□ -1.77
SPO16YHR153C SCH9P11792 824 aaKnown RBP3.99□□□□□ -1.77
SPO16YHR153C DAP2P18962 818 aa3.99□□□□□ -1.77
SPO16YHR153C OPI1P21957 404 aa3.99□□□□□ -1.77
SPO16YHR153C RDS1P25611 832 aa3.99□□□□□ -1.77
SPO16YHR153C FUN26P31381 517 aa3.99□□□□□ -1.77
SPO16YHR153C ADH5P38113 351 aaKnown RBP3.99□□□□□ -1.77
SPO16YHR153C SEC9P40357 651 aa3.99□□□□□ -1.77
SPO16YHR153C SEC27P41811 889 aaKnown RBP3.99□□□□□ -1.77
SPO16YHR153C RET3P53600 189 aa3.99□□□□□ -1.77
SPO16YHR153C YNR068CP53754 272 aa3.99□□□□□ -1.77
SPO16YHR153C YMR010WQ03687 405 aa3.99□□□□□ -1.77
SPO16YHR153C YPR091CQ06833 770 aa3.99□□□□□ -1.77
SPO16YHR153C FCY22Q12119 530 aa3.99□□□□□ -1.77
SPO16YHR153C NUP188P52593 1655 aaKnown RBP3.98□□□□□ -1.77
SPO16YHR153C MAS2P11914 482 aa3.98□□□□□ -1.77
SPO16YHR153C MSK1P32048 576 aa3.98□□□□□ -1.77
SPO16YHR153C NUP2P32499 720 aa3.98□□□□□ -1.77
SPO16YHR153C YNL208WP40159 199 aaKnown RBP3.98□□□□□ -1.77
SPO16YHR153C LYS12P40495 371 aaKnown RBP3.98□□□□□ -1.77
SPO16YHR153C DBP9Q06218 594 aaKnown RBP3.98□□□□□ -1.77
SPO16YHR153C NFI1Q12216 726 aa3.98□□□□□ -1.77
SPO16YHR153C HMS1Q12398 434 aa3.98□□□□□ -1.77
SPO16YHR153C THR4P16120 514 aaKnown RBP3.97□□□□□ -1.77
SPO16YHR153C CAJ1P39101 391 aa3.97□□□□□ -1.77
SPO16YHR153C PTI1P39927 425 aaPredicted RBP3.97□□□□□ -1.77
SPO16YHR153C LCP5P40079 357 aaPredicted RBP3.97□□□□□ -1.77
SPO16YHR153C DFG10P40526 253 aa3.97□□□□□ -1.77
SPO16YHR153C SNL1P40548 159 aa3.97□□□□□ -1.77
SPO16YHR153C ATG18P43601 500 aa3.97□□□□□ -1.77
SPO16YHR153C CWC22P53333 577 aaKnown RBP3.97□□□□□ -1.77
SPO16YHR153C RRB1Q04225 511 aaKnown RBP3.97□□□□□ -1.77
SPO16YHR153C HIF1Q12373 385 aa3.97□□□□□ -1.77
SPO16YHR153C POT1P27796 417 aaKnown RBP RIP-Chip data3.96□□□□□ -1.78not detected
SPO16YHR153C HMX1P32339 317 aa3.96□□□□□ -1.78
SPO16YHR153C SSE1P32589 693 aaKnown RBP3.96□□□□□ -1.78
SPO16YHR153C SPO23P33757 523 aa3.96□□□□□ -1.78
SPO16YHR153C ANR2P36090 516 aaPredicted RBP3.96□□□□□ -1.78
SPO16YHR153C UIP5P36137 443 aa3.96□□□□□ -1.78
SPO16YHR153C ECM8P38246 354 aa3.96□□□□□ -1.78
SPO16YHR153C SIF2P38262 535 aa3.96□□□□□ -1.78
SPO16YHR153C LSM12P38828 187 aaKnown RBP3.96□□□□□ -1.78
SPO16YHR153C EGT2P42835 1041 aa3.96□□□□□ -1.78
SPO16YHR153C YGR016WP53209 190 aa3.96□□□□□ -1.78
SPO16YHR153C YLR152CP54072 576 aa3.96□□□□□ -1.78
SPO16YHR153C UTP6Q02354 440 aaKnown RBP3.96□□□□□ -1.78
SPO16YHR153C YPR078CQ06813 372 aa3.96□□□□□ -1.78
SPO16YHR153C SHS1Q07657 551 aa3.96□□□□□ -1.78
SPO16YHR153C TMC1Q08422 150 aaPredicted RBP3.96□□□□□ -1.78
SPO16YHR153C VMR1P38735 1592 aa3.96□□□□□ -1.78
SPO16YHR153C IML1P47170 1584 aa3.95□□□□□ -1.78
SPO16YHR153C BCK1Q01389 1478 aa3.95□□□□□ -1.78
SPO16YHR153C YEL043WP32618 956 aa3.95□□□□□ -1.78
SPO16YHR153C VAM7P32912 316 aa3.95□□□□□ -1.78
SPO16YHR153C OXA1P39952 402 aa3.95□□□□□ -1.78
SPO16YHR153C YER186CP40101 306 aa3.95□□□□□ -1.78
SPO16YHR153C TRF5P48561 642 aaKnown RBP3.95□□□□□ -1.78
SPO16YHR153C BNS1P50084 137 aa3.95□□□□□ -1.78
SPO16YHR153C CRH1P53301 507 aa3.95□□□□□ -1.78
SPO16YHR153C NAG1Q8TGN9 163 aa3.95□□□□□ -1.78
SPO16YHR153C PDR11P40550 1411 aa3.95□□□□□ -1.78
SPO16YHR153C MAS1P10507 462 aa3.94□□□□□ -1.78
SPO16YHR153C MIG3P39943 394 aa3.94□□□□□ -1.78
SPO16YHR153C ABM1P47146 123 aa3.94□□□□□ -1.78
SPO16YHR153C ATP22P50273 684 aaPredicted RBP3.94□□□□□ -1.78
SPO16YHR153C PRM1P53835 661 aa3.94□□□□□ -1.78
SPO16YHR153C YNL143CP53908 130 aa3.94□□□□□ -1.78
SPO16YHR153C AQR1P53943 586 aa3.94□□□□□ -1.78
SPO16YHR153C SKI8Q02793 397 aaPredicted RBP3.94□□□□□ -1.78
SPO16YHR153C YET2Q04210 160 aa3.94□□□□□ -1.78
SPO16YHR153C YMR310CQ04867 317 aaPredicted RBP3.94□□□□□ -1.78
SPO16YHR153C YDL199CQ12407 687 aa3.94□□□□□ -1.78
SPO16YHR153C SFG1Q12507 346 aa3.94□□□□□ -1.78
SPO16YHR153C FSH3Q99369 266 aa3.94□□□□□ -1.78
SPO16YHR153C TAL1P15019 335 aaKnown RBP3.93□□□□□ -1.78
SPO16YHR153C NOP1P15646 327 aaKnown RBP3.93□□□□□ -1.78
SPO16YHR153C TPM1P17536 199 aaKnown RBP3.93□□□□□ -1.78
SPO16YHR153C DBR1P24309 405 aaKnown RBP3.93□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 28.2 ms