RNA–Protein interactions for RNA: YGR134W

CAF130, Transcript of Subunit of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF130, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF130YGR134W ERV46P39727 415 aa3.32□□□□□ -1.88
CAF130YGR134W UTP25P40498 721 aaKnown RBP3.32□□□□□ -1.88
CAF130YGR134W JHD2P47156 728 aaPredicted RBP3.32□□□□□ -1.88
CAF130YGR134W NAS6P50086 228 aa3.32□□□□□ -1.88
CAF130YGR134W DIP5P53388 608 aa3.32□□□□□ -1.88
CAF130YGR134W GPI15P53961 229 aa3.32□□□□□ -1.88
CAF130YGR134W VBA1Q04301 562 aa3.32□□□□□ -1.88
CAF130YGR134W ECM30Q06673 1274 aa3.32□□□□□ -1.88
CAF130YGR134W YKL033W-AQ86ZR7 236 aa3.32□□□□□ -1.88
CAF130YGR134W OPI3P05375 206 aa3.31□□□□□ -1.88
CAF130YGR134W COQ1P18900 473 aa3.31□□□□□ -1.88
CAF130YGR134W TCD1P38756 429 aa3.31□□□□□ -1.88
CAF130YGR134W BTT1P40314 149 aaPredicted RBP3.31□□□□□ -1.88
CAF130YGR134W SNZ3P43545 298 aa3.31□□□□□ -1.88
CAF130YGR134W YJL163CP46996 555 aa3.31□□□□□ -1.88
CAF130YGR134W BUD32P53323 261 aa3.31□□□□□ -1.88
CAF130YGR134W YIP3P53633 176 aa3.31□□□□□ -1.88
CAF130YGR134W SNZ2P53824 298 aa3.31□□□□□ -1.88
CAF130YGR134W YNL140CP53910 189 aa3.31□□□□□ -1.88
CAF130YGR134W MRP51Q02950 344 aa3.31□□□□□ -1.88
CAF130YGR134W HSP31Q04432 237 aa3.31□□□□□ -1.88
CAF130YGR134W IRC13Q08630 104 aa3.31□□□□□ -1.88
CAF130YGR134W TY4B-HP0C2J7 1802 aa3.31□□□□□ -1.88
CAF130YGR134W TY4B-JP47024 1803 aa3.31□□□□□ -1.88
CAF130YGR134W NAM2P11325 894 aa3.31□□□□□ -1.88
CAF130YGR134W FUB1P25659 250 aa3.31□□□□□ -1.88
CAF130YGR134W IST2P38250 946 aa3.31□□□□□ -1.88
CAF130YGR134W FRT2P39734 528 aa3.31□□□□□ -1.88
CAF130YGR134W RTT101P47050 842 aa3.31□□□□□ -1.88
CAF130YGR134W PRP38Q00723 242 aaPredicted RBP3.31□□□□□ -1.88
CAF130YGR134W KRE28Q04431 385 aa3.31□□□□□ -1.88
CAF130YGR134W PDR8Q06149 701 aa3.31□□□□□ -1.88
CAF130YGR134W RKI1Q12189 258 aa3.31□□□□□ -1.88
CAF130YGR134W RAD9P14737 1309 aa3.31□□□□□ -1.88
CAF130YGR134W YIL177CP40434 1758 aa3.31□□□□□ -1.88
CAF130YGR134W YJL225CP40889 1758 aa3.31□□□□□ -1.88
CAF130YGR134W ADE6P38972 1358 aaKnown RBP3.31□□□□□ -1.88
CAF130YGR134W TPI1P00942 248 aaKnown RBP3.31□□□□□ -1.88
CAF130YGR134W CDC21P06785 304 aa3.31□□□□□ -1.88
CAF130YGR134W HEM15P16622 393 aa3.31□□□□□ -1.88
CAF130YGR134W VMA6P32366 345 aaKnown RBP3.31□□□□□ -1.88
CAF130YGR134W DBP7P36120 742 aaKnown RBP3.31□□□□□ -1.88
CAF130YGR134W CHK1P38147 527 aa3.31□□□□□ -1.88
CAF130YGR134W PIG2P40187 538 aa3.31□□□□□ -1.88
CAF130YGR134W RFC4P40339 323 aaKnown RBP3.31□□□□□ -1.88
CAF130YGR134W IRC7P43623 340 aa3.31□□□□□ -1.88
CAF130YGR134W AMA1P50082 593 aa3.31□□□□□ -1.88
CAF130YGR134W NIF3P53081 288 aa3.31□□□□□ -1.88
CAF130YGR134W RSM23Q01163 450 aa3.31□□□□□ -1.88
CAF130YGR134W SNU56Q03782 492 aaKnown RBP3.31□□□□□ -1.88
CAF130YGR134W SEC13Q04491 297 aaKnown RBP3.31□□□□□ -1.88
CAF130YGR134W BNA5Q05979 453 aa3.31□□□□□ -1.88
CAF130YGR134W LSO2Q3E772 92 aaKnown RBP3.31□□□□□ -1.88
CAF130YGR134W FSH3Q99369 266 aa3.31□□□□□ -1.88
CAF130YGR134W NUP1P20676 1076 aa3.3□□□□□ -1.88
CAF130YGR134W SHP1P34223 423 aa3.3□□□□□ -1.88
CAF130YGR134W RTC2P38279 296 aa3.3□□□□□ -1.88
CAF130YGR134W YBP1P38315 674 aa3.3□□□□□ -1.88
CAF130YGR134W YGR210CP42942 411 aa3.3□□□□□ -1.88
CAF130YGR134W ARK1P53974 638 aa3.3□□□□□ -1.88
CAF130YGR134W ALE1Q08548 619 aa3.3□□□□□ -1.88
CAF130YGR134W CSM4Q08955 156 aa3.3□□□□□ -1.88
CAF130YGR134W YER145C-AA0A023PYF4 145 aa3.3□□□□□ -1.88
CAF130YGR134W OSM1P21375 501 aaKnown RBP3.3□□□□□ -1.88
CAF130YGR134W NDC1P32500 655 aa3.3□□□□□ -1.88
CAF130YGR134W TSA1P34760 196 aaKnown RBP3.3□□□□□ -1.88
CAF130YGR134W SMB1P40018 196 aaKnown RBP3.3□□□□□ -1.88
CAF130YGR134W HYR1P40581 163 aaKnown RBP3.3□□□□□ -1.88
CAF130YGR134W HIT1P46973 164 aa3.3□□□□□ -1.88
CAF130YGR134W YNL040WP53960 456 aaPredicted RBP3.3□□□□□ -1.88
CAF130YGR134W PLM2Q04383 521 aa3.3□□□□□ -1.88
CAF130YGR134W RNR3P21672 869 aaKnown RBP3.29□□□□□ -1.88
CAF130YGR134W YKL075CP36083 450 aa3.29□□□□□ -1.88
CAF130YGR134W RIB5P38145 238 aa3.29□□□□□ -1.88
CAF130YGR134W DSE1P40077 573 aa3.29□□□□□ -1.88
CAF130YGR134W YKE4P40544 346 aa3.29□□□□□ -1.88
CAF130YGR134W MUP1P50276 574 aa3.29□□□□□ -1.88
CAF130YGR134W YGL117WP53133 265 aa3.29□□□□□ -1.88
CAF130YGR134W JAC1P53193 184 aa3.29□□□□□ -1.88
CAF130YGR134W MPS1P54199 764 aa3.29□□□□□ -1.88
CAF130YGR134W GIP3Q03016 1276 aa3.29□□□□□ -1.88
CAF130YGR134W NNT1Q05874 261 aa3.29□□□□□ -1.88
CAF130YGR134W ENB1Q08299 606 aa3.29□□□□□ -1.88
CAF130YGR134W PGK1P00560 416 aaKnown RBP3.29□□□□□ -1.88
CAF130YGR134W CBS2P14905 389 aa3.29□□□□□ -1.88
CAF130YGR134W SOF1P33750 489 aaKnown RBP3.29□□□□□ -1.88
CAF130YGR134W PRX1P34227 261 aaKnown RBP3.29□□□□□ -1.88
CAF130YGR134W VPS21P36017 210 aaKnown RBP3.29□□□□□ -1.88
CAF130YGR134W YBR096WP38256 230 aa3.29□□□□□ -1.88
CAF130YGR134W FMP52P40008 231 aa3.29□□□□□ -1.88
CAF130YGR134W YRB1P41920 201 aaKnown RBP3.29□□□□□ -1.88
CAF130YGR134W BNA3P47039 444 aaKnown RBP3.29□□□□□ -1.88
CAF130YGR134W YGR151CP53287 111 aa3.29□□□□□ -1.88
CAF130YGR134W YMR310CQ04867 317 aaPredicted RBP3.29□□□□□ -1.88
CAF130YGR134W COQ11Q05892 277 aa3.29□□□□□ -1.88
CAF130YGR134W MFG1Q07684 458 aa3.29□□□□□ -1.88
CAF130YGR134W ATG34Q12292 412 aa3.29□□□□□ -1.88
CAF130YGR134W SNF8Q12483 233 aa3.29□□□□□ -1.88
CAF130YGR134W TRP3P00937 484 aa3.29□□□□□ -1.88
CAF130YGR134W GRX2P17695 143 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms