RNA–Protein interactions for RNA: YFL004W

VTC2, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC2, Length 2,487 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC2	YFL004W	HMS2	P47175	358 aa		5.16	□□□□□ -1.58
VTC2	YFL004W	TOM22	P49334	152 aa		5.16	□□□□□ -1.58
VTC2	YFL004W	HCH1	P53834	153 aa		5.16	□□□□□ -1.58
VTC2	YFL004W	SNO1	Q03144	224 aa		5.16	□□□□□ -1.58
VTC2	YFL004W	RLI1	Q03195	608 aa	Known RBP	5.16	□□□□□ -1.58
VTC2	YFL004W	MSS11	Q03825	758 aa		5.16	□□□□□ -1.58
VTC2	YFL004W	YMR087W	Q04299	284 aa		5.16	□□□□□ -1.58
VTC2	YFL004W	TMA10	Q06177	86 aa		5.16	□□□□□ -1.58
VTC2	YFL004W	MRPL35	Q06678	367 aa		5.16	□□□□□ -1.58
VTC2	YFL004W	PML1	Q07930	204 aa	Predicted RBP	5.16	□□□□□ -1.58
VTC2	YFL004W	IES4	Q08561	116 aa		5.16	□□□□□ -1.58
VTC2	YFL004W	AKR2	Q12013	749 aa		5.16	□□□□□ -1.58
VTC2	YFL004W	ATX2	Q12067	313 aa		5.16	□□□□□ -1.58
VTC2	YFL004W	RPN5	Q12250	445 aa	Known RBP	5.16	□□□□□ -1.58
VTC2	YFL004W	YPR145C-A	Q2V2P0	78 aa		5.16	□□□□□ -1.58
VTC2	YFL004W	YLR422W	Q06409	1932 aa		5.16	□□□□□ -1.58
VTC2	YFL004W	LAA1	P39526	2014 aa		5.15	□□□□□ -1.58
VTC2	YFL004W	SPS4	P09937	338 aa		5.15	□□□□□ -1.58
VTC2	YFL004W	MRP1	P10662	321 aa	Known RBP	5.15	□□□□□ -1.58
VTC2	YFL004W	SKT5	P34226	696 aa		5.15	□□□□□ -1.58
VTC2	YFL004W	KAE1	P36132	386 aa		5.15	□□□□□ -1.58
VTC2	YFL004W	YMR262W	P38430	313 aa		5.15	□□□□□ -1.58
VTC2	YFL004W	RGI2	P40188	164 aa		5.15	□□□□□ -1.58
VTC2	YFL004W	PRM10	P42946	383 aa		5.15	□□□□□ -1.58
VTC2	YFL004W	MNN10	P50108	393 aa	Known RBP	5.15	□□□□□ -1.58
VTC2	YFL004W	PHO23	P50947	330 aa		5.15	□□□□□ -1.58
VTC2	YFL004W	BUD9	P53226	547 aa		5.15	□□□□□ -1.58
VTC2	YFL004W	GIP3	Q03016	1276 aa		5.15	□□□□□ -1.58
VTC2	YFL004W	EAR1	Q03212	550 aa		5.15	□□□□□ -1.58
VTC2	YFL004W	YDR124W	Q04608	324 aa		5.15	□□□□□ -1.58
VTC2	YFL004W	YLR446W	Q06204	433 aa		5.15	□□□□□ -1.58
VTC2	YFL004W	AHA1	Q12449	350 aa	Known RBP	5.15	□□□□□ -1.58
VTC2	YFL004W	RPP2B	P02400	110 aa	Known RBP	5.15	□□□□□ -1.59
VTC2	YFL004W	RPC40	P07703	335 aa	Known RBP	5.15	□□□□□ -1.59
VTC2	YFL004W	SWI5	P08153	709 aa		5.15	□□□□□ -1.59
VTC2	YFL004W	NAM2	P11325	894 aa		5.15	□□□□□ -1.59
VTC2	YFL004W	POF1	P25576	258 aa		5.15	□□□□□ -1.59
VTC2	YFL004W	FAA1	P30624	700 aa	Known RBP	5.15	□□□□□ -1.59
VTC2	YFL004W	SUI1	P32911	108 aa	Known RBP	5.15	□□□□□ -1.59
VTC2	YFL004W	TMA19	P35691	167 aa	Known RBP	5.15	□□□□□ -1.59
VTC2	YFL004W	SOL2	P37262	315 aa		5.15	□□□□□ -1.59
VTC2	YFL004W	YBR063C	P38083	404 aa		5.15	□□□□□ -1.59
VTC2	YFL004W	ATG8	P38182	117 aa	RIP-Chip data	5.15	□□□□□ -1.59	not detected
VTC2	YFL004W	TCM62	P38228	572 aa	Known RBP	5.15	□□□□□ -1.59
VTC2	YFL004W	BIT2	P38346	545 aa		5.15	□□□□□ -1.59
VTC2	YFL004W	ALP1	P38971	573 aa		5.15	□□□□□ -1.59
VTC2	YFL004W	RFC4	P40339	323 aa	Known RBP	5.15	□□□□□ -1.59
VTC2	YFL004W	GAB1	P41733	394 aa		5.15	□□□□□ -1.59
VTC2	YFL004W	PFA3	P42836	336 aa		5.15	□□□□□ -1.59
VTC2	YFL004W	GTO1	P48239	356 aa		5.15	□□□□□ -1.59
VTC2	YFL004W	NCS6	P53088	359 aa		5.15	□□□□□ -1.59
VTC2	YFL004W	PKP2	P53170	491 aa		5.15	□□□□□ -1.59
VTC2	YFL004W	TIM13	P53299	105 aa		5.15	□□□□□ -1.59
VTC2	YFL004W	VBA1	Q04301	562 aa		5.15	□□□□□ -1.59
VTC2	YFL004W	ANT1	Q06497	328 aa		5.15	□□□□□ -1.59
VTC2	YFL004W	YPL245W	Q12179	454 aa	Known RBP	5.15	□□□□□ -1.59
VTC2	YFL004W	YPL066W	Q12194	479 aa		5.15	□□□□□ -1.59
VTC2	YFL004W	RMD5	Q12508	421 aa		5.15	□□□□□ -1.59
VTC2	YFL004W	CTF3	Q12748	733 aa		5.15	□□□□□ -1.59
VTC2	YFL004W	RAS2	P01120	322 aa	Known RBP	5.14	□□□□□ -1.59
VTC2	YFL004W	SIR2	P06700	562 aa		5.14	□□□□□ -1.59
VTC2	YFL004W	STE50	P25344	346 aa		5.14	□□□□□ -1.59
VTC2	YFL004W	YBR197C	P38306	217 aa		5.14	□□□□□ -1.59
VTC2	YFL004W	PAN6	P40459	309 aa		5.14	□□□□□ -1.59
VTC2	YFL004W	POG1	P40473	351 aa		5.14	□□□□□ -1.59
VTC2	YFL004W	SKP2	P42843	763 aa		5.14	□□□□□ -1.59
VTC2	YFL004W	ART5	P53244	586 aa	Known RBP	5.14	□□□□□ -1.59
VTC2	YFL004W	MRPS17	Q03246	237 aa	Predicted RBP	5.14	□□□□□ -1.59
VTC2	YFL004W	YMR265C	Q03508	461 aa	Known RBP	5.14	□□□□□ -1.59
VTC2	YFL004W	DPB4	Q04603	196 aa	Known RBP	5.14	□□□□□ -1.59
VTC2	YFL004W	HOF1	Q05080	669 aa		5.14	□□□□□ -1.59
VTC2	YFL004W	DCR2	Q05924	578 aa		5.14	□□□□□ -1.59
VTC2	YFL004W	YLR455W	Q06188	304 aa		5.14	□□□□□ -1.59
VTC2	YFL004W	NUS1	Q12063	375 aa		5.14	□□□□□ -1.59
VTC2	YFL004W	CDC28	P00546	298 aa	Known RBP	5.14	□□□□□ -1.59
VTC2	YFL004W	CAR2	P07991	424 aa	Known RBP	5.14	□□□□□ -1.59
VTC2	YFL004W	CAF20	P12962	161 aa	Known RBP	5.14	□□□□□ -1.59
VTC2	YFL004W	ERD1	P16151	362 aa		5.14	□□□□□ -1.59
VTC2	YFL004W	YPK2	P18961	677 aa		5.14	□□□□□ -1.59
VTC2	YFL004W	YCP4	P25349	247 aa	Known RBP	5.14	□□□□□ -1.59
VTC2	YFL004W	OAC1	P32332	324 aa		5.14	□□□□□ -1.59
VTC2	YFL004W	ASC1	P38011	319 aa	Known RBP	5.14	□□□□□ -1.59
VTC2	YFL004W	GND1	P38720	489 aa	Known RBP	5.14	□□□□□ -1.59
VTC2	YFL004W	PTC7	P38797	343 aa		5.14	□□□□□ -1.59
VTC2	YFL004W	PKP1	P40530	394 aa		5.14	□□□□□ -1.59
VTC2	YFL004W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	5.14	□□□□□ -1.59	RIP-Chip
VTC2	YFL004W	COS10	P52924	374 aa		5.14	□□□□□ -1.59
VTC2	YFL004W	YNL146W	P53906	100 aa		5.14	□□□□□ -1.59
VTC2	YFL004W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	5.14	□□□□□ -1.59	not detected
VTC2	YFL004W	KIN4	Q01919	800 aa		5.14	□□□□□ -1.59
VTC2	YFL004W	RUB1	Q03919	77 aa		5.14	□□□□□ -1.59
VTC2	YFL004W	SEN15	Q04675	128 aa		5.14	□□□□□ -1.59
VTC2	YFL004W	VID22	Q05934	901 aa		5.14	□□□□□ -1.59
VTC2	YFL004W	GPM2	Q12008	311 aa		5.14	□□□□□ -1.59
VTC2	YFL004W	SNF8	Q12483	233 aa		5.14	□□□□□ -1.59
VTC2	YFL004W	EFG1	Q3E705	233 aa	Known RBP	5.14	□□□□□ -1.59
VTC2	YFL004W	GAL80	P04387	435 aa		5.13	□□□□□ -1.59
VTC2	YFL004W	HXK2	P04807	486 aa	Known RBP	5.13	□□□□□ -1.59
VTC2	YFL004W	HOM3	P10869	527 aa		5.13	□□□□□ -1.59
VTC2	YFL004W	TFS1	P14306	219 aa		5.13	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 10.8 ms