RNA–Protein interactions for RNA: YER164W

CHD1, Transcript of Chromatin remodeler that regulates various aspects of transcription, yeastyeast

Gene CHD1, Length 4,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHD1YER164W UBR1P19812 1950 aa3.56□□□□□ -1.84
CHD1YER164W TOR2P32600 2474 aaKnown RBP3.56□□□□□ -1.84
CHD1YER164W YEL009C-AA0A023PZF2 135 aa3.56□□□□□ -1.84
CHD1YER164W KIN2P13186 1147 aaKnown RBP3.56□□□□□ -1.84
CHD1YER164W IDI1P15496 288 aa3.56□□□□□ -1.84
CHD1YER164W SEC59P20048 519 aa3.56□□□□□ -1.84
CHD1YER164W ADE1P27616 306 aa3.56□□□□□ -1.84
CHD1YER164W SSH4P32343 579 aa3.56□□□□□ -1.84
CHD1YER164W STE14P32584 239 aa3.56□□□□□ -1.84
CHD1YER164W SDH8P38345 138 aa3.56□□□□□ -1.84
CHD1YER164W RRG9P40156 214 aa3.56□□□□□ -1.84
CHD1YER164W LAS21P40367 830 aa3.56□□□□□ -1.84
CHD1YER164W HXT14P42833 540 aa3.56□□□□□ -1.84
CHD1YER164W HMS2P47175 358 aa3.56□□□□□ -1.84
CHD1YER164W YSA1Q01976 231 aa3.56□□□□□ -1.84
CHD1YER164W TOF2Q02208 771 aa3.56□□□□□ -1.84
CHD1YER164W YPL068CQ02749 293 aa3.56□□□□□ -1.84
CHD1YER164W SSL1Q04673 461 aaPredicted RBP3.56□□□□□ -1.84
CHD1YER164W RTT103Q05543 409 aa3.56□□□□□ -1.84
CHD1YER164W BSP1Q06604 576 aa3.56□□□□□ -1.84
CHD1YER164W RGT2Q12300 763 aa3.56□□□□□ -1.84
CHD1YER164W RAS1P01119 309 aa3.56□□□□□ -1.84
CHD1YER164W TRP4P07285 380 aaPredicted RBP3.56□□□□□ -1.84
CHD1YER164W APN1P22936 367 aa3.56□□□□□ -1.84
CHD1YER164W GEX1P25596 615 aa3.56□□□□□ -1.84
CHD1YER164W MRP17P28778 131 aa3.56□□□□□ -1.84
CHD1YER164W SPS19P32573 292 aaKnown RBP3.56□□□□□ -1.84
CHD1YER164W MRPL6P32904 214 aa3.56□□□□□ -1.84
CHD1YER164W GEX2P36173 615 aa3.56□□□□□ -1.84
CHD1YER164W ECM8P38246 354 aa3.56□□□□□ -1.84
CHD1YER164W PRS3P38689 320 aaKnown RBP3.56□□□□□ -1.84
CHD1YER164W IMD2P38697 523 aaKnown RBP3.56□□□□□ -1.84
CHD1YER164W MNN1P39106 762 aa3.56□□□□□ -1.84
CHD1YER164W VPS52P39904 641 aa3.56□□□□□ -1.84
CHD1YER164W YEL020CP39994 560 aa3.56□□□□□ -1.84
CHD1YER164W COA1P40452 197 aa3.56□□□□□ -1.84
CHD1YER164W RRD1P40454 393 aaKnown RBP3.56□□□□□ -1.84
CHD1YER164W YGR201CP42936 225 aa3.56□□□□□ -1.84
CHD1YER164W IDS2P46958 469 aa3.56□□□□□ -1.84
CHD1YER164W LYS5P50113 272 aa3.56□□□□□ -1.84
CHD1YER164W PMT5P52867 743 aa3.56□□□□□ -1.84
CHD1YER164W ELA1P53861 379 aaPredicted RBP3.56□□□□□ -1.84
CHD1YER164W SRP1Q02821 542 aaKnown RBP3.56□□□□□ -1.84
CHD1YER164W YPL034WQ03083 165 aa3.56□□□□□ -1.84
CHD1YER164W RIM13Q03792 727 aa3.56□□□□□ -1.84
CHD1YER164W VBA1Q04301 562 aa3.56□□□□□ -1.84
CHD1YER164W RBS1Q05672 457 aaKnown RBP3.56□□□□□ -1.84
CHD1YER164W YLR345WQ06137 509 aa3.56□□□□□ -1.84
CHD1YER164W ECM30Q06673 1274 aa3.56□□□□□ -1.84
CHD1YER164W BRX1Q08235 291 aaKnown RBP3.56□□□□□ -1.84
CHD1YER164W LEU4P06208 619 aaKnown RBP3.56□□□□□ -1.84
CHD1YER164W CDC21P06785 304 aa3.56□□□□□ -1.84
CHD1YER164W ALG7P07286 448 aa3.56□□□□□ -1.84
CHD1YER164W PBS2P08018 668 aa3.56□□□□□ -1.84
CHD1YER164W RPS18AP0CX55 146 aaKnown RBP3.56□□□□□ -1.84
CHD1YER164W RPS18BP0CX56 146 aaPredicted RBP3.56□□□□□ -1.84
CHD1YER164W CHL1P22516 861 aaPredicted RBP3.56□□□□□ -1.84
CHD1YER164W MSK1P32048 576 aa3.56□□□□□ -1.84
CHD1YER164W NAB2P32505 525 aaKnown RBP RIP-Chip data3.56□□□□□ -1.84 RIP-Chip
CHD1YER164W IMP3P32899 183 aaPredicted RBP3.56□□□□□ -1.84
CHD1YER164W SPT10P35208 640 aa3.56□□□□□ -1.84
CHD1YER164W PHO11P35842 467 aa3.56□□□□□ -1.84
CHD1YER164W MRPL4P36517 319 aa3.56□□□□□ -1.84
CHD1YER164W MRPL15P36523 253 aa3.56□□□□□ -1.84
CHD1YER164W PHO12P38693 467 aa3.56□□□□□ -1.84
CHD1YER164W YIL165CP40446 119 aa3.56□□□□□ -1.84
CHD1YER164W EMC5P40540 141 aa3.56□□□□□ -1.84
CHD1YER164W ERG10P41338 398 aaKnown RBP3.56□□□□□ -1.84
CHD1YER164W AZF1P41696 914 aa3.56□□□□□ -1.84
CHD1YER164W COX16P47081 118 aa3.56□□□□□ -1.84
CHD1YER164W SHY1P53266 389 aa3.56□□□□□ -1.84
CHD1YER164W GIP3Q03016 1276 aa3.56□□□□□ -1.84
CHD1YER164W YMR099CQ03161 297 aaKnown RBP3.56□□□□□ -1.84
CHD1YER164W YDR249CQ03787 373 aa3.56□□□□□ -1.84
CHD1YER164W COX20Q04935 205 aa3.56□□□□□ -1.84
CHD1YER164W GPB1Q08886 897 aa3.56□□□□□ -1.84
CHD1YER164W FSH3Q99369 266 aa3.56□□□□□ -1.84
CHD1YER164W RPS17AP02407 136 aaKnown RBP3.55□□□□□ -1.84
CHD1YER164W URA3P03962 267 aa3.55□□□□□ -1.84
CHD1YER164W SST2P11972 698 aaKnown RBP3.55□□□□□ -1.84
CHD1YER164W RPS17BP14127 136 aaKnown RBP3.55□□□□□ -1.84
CHD1YER164W SNF6P18888 332 aa3.55□□□□□ -1.84
CHD1YER164W PGS1P25578 521 aa3.55□□□□□ -1.84
CHD1YER164W TSA1P34760 196 aaKnown RBP3.55□□□□□ -1.84
CHD1YER164W CLG1P35190 452 aa3.55□□□□□ -1.84
CHD1YER164W GLY1P37303 387 aaKnown RBP3.55□□□□□ -1.84
CHD1YER164W EDS1P38073 919 aa3.55□□□□□ -1.84
CHD1YER164W SFB3P38810 929 aa3.55□□□□□ -1.84
CHD1YER164W HST3P53687 447 aa3.55□□□□□ -1.84
CHD1YER164W ARL3Q02804 198 aa3.55□□□□□ -1.84
CHD1YER164W PIR1Q03178 341 aa3.55□□□□□ -1.84
CHD1YER164W RRT8Q08219 342 aa3.55□□□□□ -1.84
CHD1YER164W YKL018C-AQ3E7A7 99 aa3.55□□□□□ -1.84
CHD1YER164W GLK1P17709 500 aaKnown RBP3.55□□□□□ -1.84
CHD1YER164W MRPL44P19956 98 aa3.55□□□□□ -1.84
CHD1YER164W PRE9P23638 258 aaKnown RBP3.55□□□□□ -1.84
CHD1YER164W YCL049CP25577 312 aa3.55□□□□□ -1.84
CHD1YER164W PBN1P25580 416 aa3.55□□□□□ -1.84
CHD1YER164W TAT1P38085 619 aa3.55□□□□□ -1.84
CHD1YER164W CAK1P43568 368 aaPredicted RBP3.55□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms