RNA–Protein interactions for RNA: YDR182W

CDC1, Transcript of Putative lipid phosphatase of the endoplasmic reticulum, yeast

Gene CDC1, Length 1,476 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC1	YDR182W	CLB3	P24870	427 aa		5.78	□□□□□ -1.48
CDC1	YDR182W	NFS1	P25374	497 aa		5.78	□□□□□ -1.48
CDC1	YDR182W	YIM1	P28625	365 aa		5.78	□□□□□ -1.48
CDC1	YDR182W	YEF1	P32622	495 aa		5.78	□□□□□ -1.48
CDC1	YDR182W	TSC10	P38342	320 aa		5.78	□□□□□ -1.48
CDC1	YDR182W	PTH1	P38876	190 aa	Known RBP	5.78	□□□□□ -1.48
CDC1	YDR182W	MTW1	P39731	289 aa		5.78	□□□□□ -1.48
CDC1	YDR182W	SHO1	P40073	367 aa		5.78	□□□□□ -1.48
CDC1	YDR182W	ALG5	P40350	334 aa		5.78	□□□□□ -1.48
CDC1	YDR182W	YNL181W	P53878	407 aa		5.78	□□□□□ -1.48
CDC1	YDR182W	RHO5	P53879	331 aa	Known RBP	5.78	□□□□□ -1.48
CDC1	YDR182W	MTQ1	P53944	314 aa		5.78	□□□□□ -1.48
CDC1	YDR182W	EKI1	Q03764	534 aa		5.78	□□□□□ -1.48
CDC1	YDR182W	BUR2	Q05949	395 aa		5.78	□□□□□ -1.48
CDC1	YDR182W	ARV1	Q06541	321 aa		5.78	□□□□□ -1.48
CDC1	YDR182W	YRA1	Q12159	226 aa	Known RBP	5.78	□□□□□ -1.48
CDC1	YDR182W	ATP6	P00854	259 aa		5.77	□□□□□ -1.49
CDC1	YDR182W	CBP6	P07253	162 aa	Predicted RBP	5.77	□□□□□ -1.49
CDC1	YDR182W	TOP3	P13099	656 aa		5.77	□□□□□ -1.49
CDC1	YDR182W	MDH2	P22133	377 aa		5.77	□□□□□ -1.49
CDC1	YDR182W	MSN1	P22148	382 aa		5.77	□□□□□ -1.49
CDC1	YDR182W	DGR2	P32330	852 aa		5.77	□□□□□ -1.49
CDC1	YDR182W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	5.77	□□□□□ -1.49	not detected
CDC1	YDR182W	TEF4	P36008	412 aa	Known RBP	5.77	□□□□□ -1.49
CDC1	YDR182W	IST2	P38250	946 aa		5.77	□□□□□ -1.49
CDC1	YDR182W	MNN9	P39107	395 aa	Known RBP	5.77	□□□□□ -1.49
CDC1	YDR182W	YNL195C	P40168	261 aa		5.77	□□□□□ -1.49
CDC1	YDR182W	USE1	P53146	245 aa		5.77	□□□□□ -1.49
CDC1	YDR182W	SYF2	P53277	215 aa	Predicted RBP	5.77	□□□□□ -1.49
CDC1	YDR182W	INN1	P53901	409 aa		5.77	□□□□□ -1.49
CDC1	YDR182W	MMT1	Q03218	510 aa		5.77	□□□□□ -1.49
CDC1	YDR182W	RIM13	Q03792	727 aa		5.77	□□□□□ -1.49
CDC1	YDR182W	DYN3	Q04949	312 aa		5.77	□□□□□ -1.49
CDC1	YDR182W	HRI1	Q05905	244 aa	Known RBP	5.77	□□□□□ -1.49
CDC1	YDR182W	SSQ1	Q05931	657 aa	Predicted RBP	5.77	□□□□□ -1.49
CDC1	YDR182W	YPR202W	Q08993	238 aa		5.77	□□□□□ -1.49
CDC1	YDR182W	NSL1	Q12143	216 aa		5.77	□□□□□ -1.49
CDC1	YDR182W	PSY3	Q12318	242 aa		5.77	□□□□□ -1.49
CDC1	YDR182W	FOL3	Q12676	427 aa	Predicted RBP	5.77	□□□□□ -1.49
CDC1	YDR182W	RPS1B	P23248	255 aa	Known RBP	5.77	□□□□□ -1.49
CDC1	YDR182W	CUE2	P36075	443 aa	Known RBP	5.77	□□□□□ -1.49
CDC1	YDR182W	YKR073C	P36153	106 aa		5.77	□□□□□ -1.49
CDC1	YDR182W	TDP1	P38319	544 aa		5.77	□□□□□ -1.49
CDC1	YDR182W	MTC4	P38335	694 aa	Known RBP	5.77	□□□□□ -1.49
CDC1	YDR182W	YMR262W	P38430	313 aa		5.77	□□□□□ -1.49
CDC1	YDR182W	BIG1	P38813	335 aa		5.77	□□□□□ -1.49
CDC1	YDR182W	FAD1	P38913	306 aa		5.77	□□□□□ -1.49
CDC1	YDR182W	MDJ2	P42834	146 aa		5.77	□□□□□ -1.49
CDC1	YDR182W	DIA3	P52290	468 aa		5.77	□□□□□ -1.49
CDC1	YDR182W	COG2	P53271	262 aa		5.77	□□□□□ -1.49
CDC1	YDR182W	RSC9	Q03124	581 aa		5.77	□□□□□ -1.49
CDC1	YDR182W	HSP31	Q04432	237 aa		5.77	□□□□□ -1.49
CDC1	YDR182W	COX20	Q04935	205 aa		5.77	□□□□□ -1.49
CDC1	YDR182W	PDX1	P16451	410 aa		5.76	□□□□□ -1.49
CDC1	YDR182W	CSM1	P25651	190 aa		5.76	□□□□□ -1.49
CDC1	YDR182W	TOA1	P32773	286 aa		5.76	□□□□□ -1.49
CDC1	YDR182W	MTR2	P34232	184 aa	Known RBP	5.76	□□□□□ -1.49
CDC1	YDR182W	NIT2	P47016	307 aa		5.76	□□□□□ -1.49
CDC1	YDR182W	BUD9	P53226	547 aa		5.76	□□□□□ -1.49
CDC1	YDR182W	TWF1	P53250	332 aa		5.76	□□□□□ -1.49
CDC1	YDR182W	OGG1	P53397	376 aa	Predicted RBP	5.76	□□□□□ -1.49
CDC1	YDR182W	URC2	Q04411	772 aa		5.76	□□□□□ -1.49
CDC1	YDR182W	KRE28	Q04431	385 aa		5.76	□□□□□ -1.49
CDC1	YDR182W	SAN1	P22470	610 aa		5.75	□□□□□ -1.49
CDC1	YDR182W	AIM17	P23180	465 aa	Known RBP	5.75	□□□□□ -1.49
CDC1	YDR182W	MGE1	P38523	228 aa		5.75	□□□□□ -1.49
CDC1	YDR182W	YHR180W	P38868	163 aa		5.75	□□□□□ -1.49
CDC1	YDR182W	YHR219W	P38900	624 aa		5.75	□□□□□ -1.49
CDC1	YDR182W	MET28	P40573	187 aa		5.75	□□□□□ -1.49
CDC1	YDR182W	SHE4	P51534	789 aa		5.75	□□□□□ -1.49
CDC1	YDR182W	MON1	P53129	644 aa		5.75	□□□□□ -1.49
CDC1	YDR182W	SUB1	P54000	292 aa	Known RBP	5.75	□□□□□ -1.49
CDC1	YDR182W	MFG1	Q07684	458 aa		5.75	□□□□□ -1.49
CDC1	YDR182W	ENB1	Q08299	606 aa		5.75	□□□□□ -1.49
CDC1	YDR182W	RDL2	Q08742	149 aa	Known RBP	5.75	□□□□□ -1.49
CDC1	YDR182W	YIG1	Q08956	461 aa		5.75	□□□□□ -1.49
CDC1	YDR182W	YDL211C	Q12121	372 aa		5.75	□□□□□ -1.49
CDC1	YDR182W	HEM4	P06174	275 aa		5.74	□□□□□ -1.49
CDC1	YDR182W	ERD2	P18414	219 aa		5.74	□□□□□ -1.49
CDC1	YDR182W	DBP3	P20447	523 aa	Known RBP	5.74	□□□□□ -1.49
CDC1	YDR182W	GAS1	P22146	559 aa	Known RBP	5.74	□□□□□ -1.49
CDC1	YDR182W	RPI1	P23250	407 aa	Known RBP	5.74	□□□□□ -1.49
CDC1	YDR182W	CDC10	P25342	322 aa	Known RBP	5.74	□□□□□ -1.49
CDC1	YDR182W	DEP1	P31385	405 aa		5.74	□□□□□ -1.49
CDC1	YDR182W	TRM5	P38793	499 aa		5.74	□□□□□ -1.49
CDC1	YDR182W	YJR142W	P47173	342 aa		5.74	□□□□□ -1.49
CDC1	YDR182W	MSY1	P48527	492 aa		5.74	□□□□□ -1.49
CDC1	YDR182W	SPO77	Q06134	477 aa		5.74	□□□□□ -1.49
CDC1	YDR182W	BRX1	Q08235	291 aa	Known RBP	5.74	□□□□□ -1.49
CDC1	YDR182W	NCE102	Q12207	173 aa	RIP-Chip data	5.74	□□□□□ -1.49	not detected
CDC1	YDR182W	YOR214C	Q12282	236 aa		5.74	□□□□□ -1.49
CDC1	YDR182W	PRP4	P20053	465 aa	Known RBP	5.73	□□□□□ -1.49
CDC1	YDR182W	REC107	P21651	314 aa		5.73	□□□□□ -1.49
CDC1	YDR182W	EHD3	P28817	500 aa		5.73	□□□□□ -1.49
CDC1	YDR182W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	5.73	□□□□□ -1.49	RIP-Chip
CDC1	YDR182W	YGP1	P38616	354 aa	Known RBP	5.73	□□□□□ -1.49
CDC1	YDR182W	MTC6	P38849	526 aa		5.73	□□□□□ -1.49
CDC1	YDR182W	SEN34	P39707	275 aa		5.73	□□□□□ -1.49
CDC1	YDR182W	YFL066C	P43538	392 aa		5.73	□□□□□ -1.49
CDC1	YDR182W	BLM10	P43583	2143 aa		5.73	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms