RNA–Protein interactions for RNA: YDR077W

SED1, Transcript of Major stress-induced structural GPI-cell wall glycoprotein, yeastyeast

Gene SED1, Length 1,017 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED1YDR077W SMK1P41808 388 aa8.79□□□□□ -1
SED1YDR077W YGR054WP53235 642 aaKnown RBP8.79□□□□□ -1
SED1YDR077W YDR541CQ03049 344 aa8.79□□□□□ -1
SED1YDR077W YMR087WQ04299 284 aa8.79□□□□□ -1
SED1YDR077W MGR3Q04472 501 aa8.79□□□□□ -1
SED1YDR077W MRX10Q05648 414 aa8.79□□□□□ -1
SED1YDR077W YOR389WQ08912 624 aa8.79□□□□□ -1
SED1YDR077W YDR061WQ12298 539 aa8.79□□□□□ -1
SED1YDR077W PNS1Q12412 539 aa8.79□□□□□ -1
SED1YDR077W GAL4P04386 881 aa8.78□□□□□ -1
SED1YDR077W YOL162WP0CF19 215 aa8.78□□□□□ -1
SED1YDR077W MDH1P17505 334 aaKnown RBP RIP-Chip data8.78□□□□□ -1not detected
SED1YDR077W PBN1P25580 416 aa8.78□□□□□ -1
SED1YDR077W ORC2P32833 620 aa8.78□□□□□ -1
SED1YDR077W DHR2P36009 735 aaPredicted RBP8.78□□□□□ -1
SED1YDR077W BAP2P38084 609 aa8.78□□□□□ -1
SED1YDR077W IFA38P38286 347 aa8.78□□□□□ -1
SED1YDR077W YHR035WP38769 630 aa8.78□□□□□ -1
SED1YDR077W MDM31P38880 579 aa8.78□□□□□ -1
SED1YDR077W YEL068CP39977 110 aa8.78□□□□□ -1
SED1YDR077W ZRG8P40021 1076 aa8.78□□□□□ -1
SED1YDR077W BUR6P40096 142 aa8.78□□□□□ -1
SED1YDR077W YJR141WP47172 347 aaPredicted RBP8.78□□□□□ -1
SED1YDR077W BUD17P53727 317 aa8.78□□□□□ -1
SED1YDR077W ELP6Q04868 273 aa8.78□□□□□ -1
SED1YDR077W VID22Q05934 901 aa8.78□□□□□ -1
SED1YDR077W YPQ2Q06328 317 aa8.78□□□□□ -1
SED1YDR077W YDL114WQ07530 308 aa8.78□□□□□ -1
SED1YDR077W NOP12Q08208 459 aaKnown RBP8.78□□□□□ -1
SED1YDR077W IES3Q12345 250 aa8.78□□□□□ -1
SED1YDR077W APC2Q12440 853 aa8.78□□□□□ -1
SED1YDR077W GPI12P23797 304 aa8.77□□□□□ -1.01
SED1YDR077W NPL6P32832 435 aa8.77□□□□□ -1.01
SED1YDR077W ECM15P35195 104 aa8.77□□□□□ -1.01
SED1YDR077W TPO5P36029 618 aa8.77□□□□□ -1.01
SED1YDR077W YBR139WP38109 508 aa8.77□□□□□ -1.01
SED1YDR077W FMP23P38231 175 aa8.77□□□□□ -1.01
SED1YDR077W ALP1P38971 573 aa8.77□□□□□ -1.01
SED1YDR077W VPS52P39904 641 aa8.77□□□□□ -1.01
SED1YDR077W YIL152WP40455 235 aa8.77□□□□□ -1.01
SED1YDR077W UTP25P40498 721 aaKnown RBP8.77□□□□□ -1.01
SED1YDR077W DUG1P43616 481 aaKnown RBP8.77□□□□□ -1.01
SED1YDR077W SSY5P47002 699 aa8.77□□□□□ -1.01
SED1YDR077W INP1Q03694 420 aa8.77□□□□□ -1.01
SED1YDR077W FIN1Q03898 291 aa8.77□□□□□ -1.01
SED1YDR077W SEC13Q04491 297 aaKnown RBP8.77□□□□□ -1.01
SED1YDR077W CRT10Q08226 957 aa8.77□□□□□ -1.01
SED1YDR077W PSF1Q12488 208 aa8.77□□□□□ -1.01
SED1YDR077W LSO1Q3E827 93 aa8.77□□□□□ -1.01
SED1YDR077W DET1Q99288 334 aaKnown RBP8.77□□□□□ -1.01
SED1YDR077W TOR2P32600 2474 aaKnown RBP8.76□□□□□ -1.01
SED1YDR077W AI1P03875 834 aa8.76□□□□□ -1.01
SED1YDR077W YSF3P0C074 85 aaPredicted RBP8.76□□□□□ -1.01
SED1YDR077W DPM1P14020 267 aaKnown RBP8.76□□□□□ -1.01
SED1YDR077W NDC1P32500 655 aa8.76□□□□□ -1.01
SED1YDR077W ANS1P38832 159 aa8.76□□□□□ -1.01
SED1YDR077W JLP2P40206 208 aa8.76□□□□□ -1.01
SED1YDR077W LEM3P42838 414 aa8.76□□□□□ -1.01
SED1YDR077W IRC7P43623 340 aa8.76□□□□□ -1.01
SED1YDR077W IDS2P46958 469 aa8.76□□□□□ -1.01
SED1YDR077W MDE1P47095 244 aa8.76□□□□□ -1.01
SED1YDR077W SPT20P50875 604 aa8.76□□□□□ -1.01
SED1YDR077W YGR266WP53326 701 aa8.76□□□□□ -1.01
SED1YDR077W NRM1P53718 249 aa8.76□□□□□ -1.01
SED1YDR077W MAK3Q03503 176 aa8.76□□□□□ -1.01
SED1YDR077W TPP1Q03796 238 aa8.76□□□□□ -1.01
SED1YDR077W GRX3Q03835 250 aa8.76□□□□□ -1.01
SED1YDR077W MLC2Q06580 163 aa8.76□□□□□ -1.01
SED1YDR077W YLR040CQ07988 224 aa8.76□□□□□ -1.01
SED1YDR077W BRX1Q08235 291 aaKnown RBP8.76□□□□□ -1.01
SED1YDR077W SPC3Q12133 184 aa8.76□□□□□ -1.01
SED1YDR077W YDL007C-AQ2V2Q0 85 aa8.76□□□□□ -1.01
SED1YDR077W MET2P08465 486 aa8.75□□□□□ -1.01
SED1YDR077W PRP28P23394 588 aa8.75□□□□□ -1.01
SED1YDR077W PUP2P32379 260 aa8.75□□□□□ -1.01
SED1YDR077W MKK2P32491 506 aa8.75□□□□□ -1.01
SED1YDR077W YPT7P32939 208 aa8.75□□□□□ -1.01
SED1YDR077W SEA4P38164 1038 aa8.75□□□□□ -1.01
SED1YDR077W AMN1P38285 549 aaPredicted RBP8.75□□□□□ -1.01
SED1YDR077W PZF1P39933 429 aa8.75□□□□□ -1.01
SED1YDR077W COS10P52924 374 aa8.75□□□□□ -1.01
SED1YDR077W YGL101WP53144 215 aa8.75□□□□□ -1.01
SED1YDR077W YGR067CP53243 804 aa8.75□□□□□ -1.01
SED1YDR077W ERB1Q04660 807 aaKnown RBP8.75□□□□□ -1.01
SED1YDR077W RPL20AP0CX23 172 aaKnown RBP8.74□□□□□ -1.01
SED1YDR077W RPL20BP0CX24 172 aaPredicted RBP8.74□□□□□ -1.01
SED1YDR077W ERD2P18414 219 aa8.74□□□□□ -1.01
SED1YDR077W KGD1P20967 1014 aaKnown RBP8.74□□□□□ -1.01
SED1YDR077W YCR100CP25606 316 aa8.74□□□□□ -1.01
SED1YDR077W SUR1P33300 382 aa8.74□□□□□ -1.01
SED1YDR077W SNU114P36048 1008 aaKnown RBP8.74□□□□□ -1.01
SED1YDR077W MCM7P38132 845 aa8.74□□□□□ -1.01
SED1YDR077W CHL4P38907 458 aa8.74□□□□□ -1.01
SED1YDR077W YNL195CP40168 261 aa8.74□□□□□ -1.01
SED1YDR077W YIL166CP40445 542 aa8.74□□□□□ -1.01
SED1YDR077W QRI7P43122 407 aa8.74□□□□□ -1.01
SED1YDR077W RBG2P53295 368 aaKnown RBP8.74□□□□□ -1.01
SED1YDR077W CIK1Q01649 594 aa8.74□□□□□ -1.01
SED1YDR077W NCE101Q02820 53 aa8.74□□□□□ -1.01
SED1YDR077W DML1Q03652 475 aa8.74□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms