RNA–Protein interactions for RNA: YDL154W

MSH5, Transcript of Protein of the MutS family, yeastyeast

Gene MSH5, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH5YDL154W YOP1Q12402 180 aa1.51□□□□□ -2.17
MSH5YDL154W YMR230W-AQ3E7B5 62 aa1.51□□□□□ -2.17
MSH5YDL154W UBA1P22515 1024 aaKnown RBP1.5□□□□□ -2.17
MSH5YDL154W LOS1P33418 1100 aaPredicted RBP1.5□□□□□ -2.17
MSH5YDL154W YKL097CP34245 136 aa1.5□□□□□ -2.17
MSH5YDL154W CCT4P39078 528 aaKnown RBP1.5□□□□□ -2.17
MSH5YDL154W SEC9P40357 651 aa1.5□□□□□ -2.17
MSH5YDL154W STE24P47154 453 aa1.5□□□□□ -2.17
MSH5YDL154W MRM2P53123 320 aa1.5□□□□□ -2.17
MSH5YDL154W YNL146WP53906 100 aa1.5□□□□□ -2.17
MSH5YDL154W PRP3Q03338 469 aaPredicted RBP1.5□□□□□ -2.17
MSH5YDL154W URC2Q04411 772 aa1.5□□□□□ -2.17
MSH5YDL154W HRI1Q05905 244 aaKnown RBP1.5□□□□□ -2.17
MSH5YDL154W PGC1Q08959 321 aa1.5□□□□□ -2.17
MSH5YDL154W TY3A-GQ12173 290 aa1.5□□□□□ -2.17
MSH5YDL154W RNH203Q12338 110 aa1.5□□□□□ -2.17
MSH5YDL154W APC2Q12440 853 aa1.5□□□□□ -2.17
MSH5YDL154W TY3A-IQ99219 290 aa1.5□□□□□ -2.17
MSH5YDL154W CLN3P13365 580 aa1.5□□□□□ -2.17
MSH5YDL154W CBS2P14905 389 aa1.5□□□□□ -2.17
MSH5YDL154W RNA14P25298 677 aaKnown RBP1.5□□□□□ -2.17
MSH5YDL154W POT1P27796 417 aaKnown RBP RIP-Chip data1.5□□□□□ -2.17not detected
MSH5YDL154W NIP1P32497 812 aaKnown RBP1.5□□□□□ -2.17
MSH5YDL154W YEF1P32622 495 aa1.5□□□□□ -2.17
MSH5YDL154W YHR182WP38870 785 aa1.5□□□□□ -2.17
MSH5YDL154W KRE9P39005 276 aa1.5□□□□□ -2.17
MSH5YDL154W YFR057WP43625 151 aa1.5□□□□□ -2.17
MSH5YDL154W MDE1P47095 244 aa1.5□□□□□ -2.17
MSH5YDL154W ARR1Q06596 294 aa1.5□□□□□ -2.17
MSH5YDL154W LOT6Q07923 191 aa1.5□□□□□ -2.17
MSH5YDL154W SMC5Q08204 1093 aa1.5□□□□□ -2.17
MSH5YDL154W RAX1Q08760 435 aa1.5□□□□□ -2.17
MSH5YDL154W HKR1P41809 1802 aa1.5□□□□□ -2.17
MSH5YDL154W STE3P06783 470 aa1.49□□□□□ -2.17
MSH5YDL154W MAS1P10507 462 aa1.49□□□□□ -2.17
MSH5YDL154W SPT15P13393 240 aaKnown RBP1.49□□□□□ -2.17
MSH5YDL154W TAL1P15019 335 aaKnown RBP1.49□□□□□ -2.17
MSH5YDL154W VMA2P16140 517 aaKnown RBP1.49□□□□□ -2.17
MSH5YDL154W DAP2P18962 818 aa1.49□□□□□ -2.17
MSH5YDL154W ARO2P28777 376 aaKnown RBP1.49□□□□□ -2.17
MSH5YDL154W YEL043WP32618 956 aa1.49□□□□□ -2.17
MSH5YDL154W MRPL10P36520 322 aa1.49□□□□□ -2.17
MSH5YDL154W YBR139WP38109 508 aa1.49□□□□□ -2.17
MSH5YDL154W SBE22P38814 852 aa1.49□□□□□ -2.17
MSH5YDL154W YHC3P47040 408 aa1.49□□□□□ -2.17
MSH5YDL154W PMT5P52867 743 aa1.49□□□□□ -2.17
MSH5YDL154W CWC22P53333 577 aaKnown RBP1.49□□□□□ -2.17
MSH5YDL154W YNR068CP53754 272 aa1.49□□□□□ -2.17
MSH5YDL154W IMP4P53941 290 aaKnown RBP1.49□□□□□ -2.17
MSH5YDL154W MDM36Q06820 579 aa1.49□□□□□ -2.17
MSH5YDL154W YPL278CQ08990 100 aa1.49□□□□□ -2.17
MSH5YDL154W PAB1P04147 577 aaKnown RBP RIP-Chip data1.49□□□□□ -2.17not detected
MSH5YDL154W RPL12AP0CX53 165 aaKnown RBP1.49□□□□□ -2.17
MSH5YDL154W RPL12BP0CX54 165 aa1.49□□□□□ -2.17
MSH5YDL154W MRPL8P22353 238 aa1.49□□□□□ -2.17
MSH5YDL154W KRR1P25586 316 aaPredicted RBP1.49□□□□□ -2.17
MSH5YDL154W PSO2P30620 661 aa1.49□□□□□ -2.17
MSH5YDL154W FAA1P30624 700 aaKnown RBP1.49□□□□□ -2.17
MSH5YDL154W HMX1P32339 317 aa1.49□□□□□ -2.17
MSH5YDL154W YBR137WP38276 179 aa1.49□□□□□ -2.17
MSH5YDL154W MSG5P38590 489 aa1.49□□□□□ -2.17
MSH5YDL154W YNL208WP40159 199 aaKnown RBP1.49□□□□□ -2.17
MSH5YDL154W JLP2P40206 208 aa1.49□□□□□ -2.17
MSH5YDL154W SIM1P40472 476 aa1.49□□□□□ -2.17
MSH5YDL154W LYS12P40495 371 aaKnown RBP1.49□□□□□ -2.17
MSH5YDL154W LCB3P47013 409 aa1.49□□□□□ -2.17
MSH5YDL154W AIM24P47127 394 aa1.49□□□□□ -2.17
MSH5YDL154W PDR16P53860 351 aaKnown RBP1.49□□□□□ -2.17
MSH5YDL154W YNL143CP53908 130 aa1.49□□□□□ -2.17
MSH5YDL154W YMR102CQ03177 834 aa1.49□□□□□ -2.17
MSH5YDL154W SMP3Q04174 516 aa1.49□□□□□ -2.17
MSH5YDL154W RRB1Q04225 511 aaKnown RBP1.49□□□□□ -2.17
MSH5YDL154W RTT103Q05543 409 aa1.49□□□□□ -2.17
MSH5YDL154W SHS1Q07657 551 aa1.49□□□□□ -2.17
MSH5YDL154W PML1Q07930 204 aaPredicted RBP1.49□□□□□ -2.17
MSH5YDL154W PCL9Q12477 304 aa1.49□□□□□ -2.17
MSH5YDL154W YCR024C-BQ3E7Z8 88 aa1.49□□□□□ -2.17
MSH5YDL154W YLL053CP0CD98 152 aa1.48□□□□□ -2.17
MSH5YDL154W SSC1P0CS90 654 aaKnown RBP1.48□□□□□ -2.17
MSH5YDL154W THR4P16120 514 aaKnown RBP1.48□□□□□ -2.17
MSH5YDL154W YUR1P26725 428 aa1.48□□□□□ -2.17
MSH5YDL154W MSK1P32048 576 aa1.48□□□□□ -2.17
MSH5YDL154W EFB1P32471 206 aaKnown RBP1.48□□□□□ -2.17
MSH5YDL154W TIR2P33890 251 aa1.48□□□□□ -2.17
MSH5YDL154W PTK1P36002 662 aaPredicted RBP1.48□□□□□ -2.17
MSH5YDL154W MCR1P36060 302 aaKnown RBP1.48□□□□□ -2.17
MSH5YDL154W YHK8P38776 514 aa1.48□□□□□ -2.17
MSH5YDL154W YHR177WP38867 453 aa1.48□□□□□ -2.17
MSH5YDL154W BIR1P47134 954 aa1.48□□□□□ -2.17
MSH5YDL154W ELP3Q02908 557 aaKnown RBP1.48□□□□□ -2.17
MSH5YDL154W PAL1Q05518 499 aaKnown RBP1.48□□□□□ -2.17
MSH5YDL154W IRC25Q07951 179 aa1.48□□□□□ -2.17
MSH5YDL154W YER078W-AQ3E7A2 54 aa1.48□□□□□ -2.17
MSH5YDL154W RGS2Q99188 309 aa1.48□□□□□ -2.17
MSH5YDL154W MEX67Q99257 599 aaKnown RBP1.48□□□□□ -2.17
MSH5YDL154W FSH3Q99369 266 aa1.48□□□□□ -2.17
MSH5YDL154W RDS1P25611 832 aa1.48□□□□□ -2.17
MSH5YDL154W SSE1P32589 693 aaKnown RBP1.48□□□□□ -2.17
MSH5YDL154W SEC27P41811 889 aaKnown RBP1.48□□□□□ -2.17
MSH5YDL154W YGL114WP53134 725 aa1.48□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms