RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	YGR168C	P53293	376 aa		4.75	□□□□□ -1.65
RPN5	YDL147W	CWC22	P53333	577 aa	Known RBP	4.75	□□□□□ -1.65
RPN5	YDL147W	DBP6	P53734	629 aa	Known RBP	4.75	□□□□□ -1.65
RPN5	YDL147W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.75	□□□□□ -1.65	not detected
RPN5	YDL147W	TDA1	Q03533	586 aa		4.75	□□□□□ -1.65
RPN5	YDL147W	RTN1	Q04947	295 aa	Known RBP	4.75	□□□□□ -1.65
RPN5	YDL147W	YPR091C	Q06833	770 aa		4.75	□□□□□ -1.65
RPN5	YDL147W	FCY22	Q12119	530 aa		4.75	□□□□□ -1.65
RPN5	YDL147W	SPT15	P13393	240 aa	Known RBP	4.74	□□□□□ -1.65
RPN5	YDL147W	UGA1	P17649	471 aa		4.74	□□□□□ -1.65
RPN5	YDL147W	UTR1	P21373	530 aa		4.74	□□□□□ -1.65
RPN5	YDL147W	BUD2	P33314	1104 aa		4.74	□□□□□ -1.65
RPN5	YDL147W	ATG7	P38862	630 aa		4.74	□□□□□ -1.65
RPN5	YDL147W	NAS6	P50086	228 aa		4.74	□□□□□ -1.65
RPN5	YDL147W	RVB1	Q03940	463 aa	Known RBP	4.74	□□□□□ -1.65
RPN5	YDL147W	RRG8	Q06109	277 aa		4.74	□□□□□ -1.65
RPN5	YDL147W	VAC14	Q06708	880 aa		4.74	□□□□□ -1.65
RPN5	YDL147W	SLF1	Q12034	447 aa	Known RBP	4.74	□□□□□ -1.65
RPN5	YDL147W	PAA1	Q12447	191 aa	Known RBP	4.74	□□□□□ -1.65
RPN5	YDL147W	YPR1	Q12458	312 aa		4.74	□□□□□ -1.65
RPN5	YDL147W	STE2	D6VTK4	431 aa		4.73	□□□□□ -1.65
RPN5	YDL147W	RAD1	P06777	1100 aa		4.73	□□□□□ -1.65
RPN5	YDL147W	CAR2	P07991	424 aa	Known RBP	4.73	□□□□□ -1.65
RPN5	YDL147W	RPL16A	P26784	199 aa	Known RBP	4.73	□□□□□ -1.65
RPN5	YDL147W	YPT35	P38815	214 aa	Known RBP	4.73	□□□□□ -1.65
RPN5	YDL147W	YFR057W	P43625	151 aa		4.73	□□□□□ -1.65
RPN5	YDL147W	TAF6	P53040	516 aa		4.73	□□□□□ -1.65
RPN5	YDL147W	ELP3	Q02908	557 aa	Known RBP	4.73	□□□□□ -1.65
RPN5	YDL147W	APC4	Q04601	652 aa		4.73	□□□□□ -1.65
RPN5	YDL147W	YDL114W	Q07530	308 aa		4.73	□□□□□ -1.65
RPN5	YDL147W	RRP36	Q12481	300 aa	Predicted RBP	4.73	□□□□□ -1.65
RPN5	YDL147W	UBA3	Q99344	299 aa		4.73	□□□□□ -1.65
RPN5	YDL147W	MSI1	P13712	422 aa		4.72	□□□□□ -1.65
RPN5	YDL147W	MSS116	P15424	664 aa	Known RBP	4.72	□□□□□ -1.65
RPN5	YDL147W	RBK1	P25332	333 aa		4.72	□□□□□ -1.65
RPN5	YDL147W	ARO2	P28777	376 aa	Known RBP	4.72	□□□□□ -1.65
RPN5	YDL147W	ITR2	P30606	609 aa		4.72	□□□□□ -1.65
RPN5	YDL147W	ACB1	P31787	87 aa		4.72	□□□□□ -1.65
RPN5	YDL147W	MKK1	P32490	508 aa		4.72	□□□□□ -1.65
RPN5	YDL147W	YKR015C	P36111	568 aa		4.72	□□□□□ -1.65
RPN5	YDL147W	YMR262W	P38430	313 aa		4.72	□□□□□ -1.65
RPN5	YDL147W	MST27	P53176	234 aa		4.72	□□□□□ -1.65
RPN5	YDL147W	CLD1	P53264	445 aa		4.72	□□□□□ -1.65
RPN5	YDL147W	SPO19	Q03029	223 aa		4.72	□□□□□ -1.65
RPN5	YDL147W	HRI1	Q05905	244 aa	Known RBP	4.72	□□□□□ -1.65
RPN5	YDL147W	SAM4	Q08985	325 aa	Known RBP	4.72	□□□□□ -1.65
RPN5	YDL147W	ERV2	Q12284	196 aa		4.72	□□□□□ -1.65
RPN5	YDL147W	HMS1	Q12398	434 aa		4.72	□□□□□ -1.65
RPN5	YDL147W	RPS8A	P0CX39	200 aa	Known RBP	4.72	□□□□□ -1.65
RPN5	YDL147W	RPS8B	P0CX40	200 aa	Known RBP	4.72	□□□□□ -1.65
RPN5	YDL147W	RPB5	P20434	215 aa		4.72	□□□□□ -1.65
RPN5	YDL147W	RAD23	P32628	398 aa	Known RBP	4.72	□□□□□ -1.65
RPN5	YDL147W	SPO23	P33757	523 aa		4.72	□□□□□ -1.65
RPN5	YDL147W	AVT5	P38176	459 aa		4.72	□□□□□ -1.65
RPN5	YDL147W	PEX18	P38855	283 aa		4.72	□□□□□ -1.65
RPN5	YDL147W	KRE9	P39005	276 aa		4.72	□□□□□ -1.65
RPN5	YDL147W	YNL208W	P40159	199 aa	Known RBP	4.72	□□□□□ -1.65
RPN5	YDL147W	REX2	P54964	269 aa	Known RBP	4.72	□□□□□ -1.65
RPN5	YDL147W	ECM18	Q04623	453 aa		4.72	□□□□□ -1.65
RPN5	YDL147W	RIF2	Q06208	395 aa		4.72	□□□□□ -1.65
RPN5	YDL147W	DNL4	Q08387	944 aa	Predicted RBP	4.72	□□□□□ -1.65
RPN5	YDL147W	TMS1	Q12116	473 aa		4.72	□□□□□ -1.65
RPN5	YDL147W	YMR230W-A	Q3E7B5	62 aa		4.72	□□□□□ -1.65
RPN5	YDL147W	SUP35	P05453	685 aa	Known RBP	4.71	□□□□□ -1.66
RPN5	YDL147W	PET123	P17558	318 aa		4.71	□□□□□ -1.66
RPN5	YDL147W	DCC1	P25559	380 aa		4.71	□□□□□ -1.66
RPN5	YDL147W	CPR3	P25719	182 aa		4.71	□□□□□ -1.66
RPN5	YDL147W	ERG9	P29704	444 aa		4.71	□□□□□ -1.66
RPN5	YDL147W	RPC25	P35718	212 aa		4.71	□□□□□ -1.66
RPN5	YDL147W	FET3	P38993	636 aa		4.71	□□□□□ -1.66
RPN5	YDL147W	FHL1	P39521	936 aa		4.71	□□□□□ -1.66
RPN5	YDL147W	SNM1	P40993	198 aa		4.71	□□□□□ -1.66
RPN5	YDL147W	YJR085C	P47131	105 aa	Known RBP	4.71	□□□□□ -1.66
RPN5	YDL147W	RPN14	P53196	417 aa		4.71	□□□□□ -1.66
RPN5	YDL147W	PXR1	P53335	271 aa	Predicted RBP	4.71	□□□□□ -1.66
RPN5	YDL147W	ERV41	Q04651	352 aa		4.71	□□□□□ -1.66
RPN5	YDL147W	CSM3	Q04659	317 aa		4.71	□□□□□ -1.66
RPN5	YDL147W	IRC25	Q07951	179 aa		4.71	□□□□□ -1.66
RPN5	YDL147W	JID1	Q12350	301 aa		4.71	□□□□□ -1.66
RPN5	YDL147W	RPS18A	P0CX55	146 aa	Known RBP	4.7	□□□□□ -1.66
RPN5	YDL147W	RPS18B	P0CX56	146 aa	Predicted RBP	4.7	□□□□□ -1.66
RPN5	YDL147W	YUR1	P26725	428 aa		4.7	□□□□□ -1.66
RPN5	YDL147W	CSE2	P33308	149 aa		4.7	□□□□□ -1.66
RPN5	YDL147W	MMS21	P38632	267 aa		4.7	□□□□□ -1.66
RPN5	YDL147W	YHR218W	P38899	603 aa		4.7	□□□□□ -1.66
RPN5	YDL147W	PAN6	P40459	309 aa		4.7	□□□□□ -1.66
RPN5	YDL147W	YNL320W	P42840	284 aa		4.7	□□□□□ -1.66
RPN5	YDL147W	GTO1	P48239	356 aa		4.7	□□□□□ -1.66
RPN5	YDL147W	YDL199C	Q12407	687 aa		4.7	□□□□□ -1.66
RPN5	YDL147W	INO80	P53115	1489 aa		4.69	□□□□□ -1.66
RPN5	YDL147W	HEM4	P06174	275 aa		4.69	□□□□□ -1.66
RPN5	YDL147W	FUN26	P31381	517 aa		4.69	□□□□□ -1.66
RPN5	YDL147W	DFG10	P40526	253 aa		4.69	□□□□□ -1.66
RPN5	YDL147W	REE1	P40893	198 aa		4.69	□□□□□ -1.66
RPN5	YDL147W	CDC40	P40968	455 aa	Predicted RBP	4.69	□□□□□ -1.66
RPN5	YDL147W	CIN2	P46670	268 aa		4.69	□□□□□ -1.66
RPN5	YDL147W	HCH1	P53834	153 aa		4.69	□□□□□ -1.66
RPN5	YDL147W	CMS1	Q07897	291 aa	Known RBP	4.69	□□□□□ -1.66
RPN5	YDL147W	YDL109C	Q12103	647 aa		4.69	□□□□□ -1.66
RPN5	YDL147W	NAM9	P27929	486 aa		4.68	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms