RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C HKR1P41809 1802 aa1.03□□□□□ -2.24
VAM6YDL077C SEM1O94742 89 aa1.03□□□□□ -2.24
VAM6YDL077C GAL4P04386 881 aa1.03□□□□□ -2.24
VAM6YDL077C GAL7P08431 366 aa1.03□□□□□ -2.24
VAM6YDL077C MET2P08465 486 aa1.03□□□□□ -2.24
VAM6YDL077C RPL27AP0C2H6 136 aaKnown RBP1.03□□□□□ -2.24
VAM6YDL077C RPL27BP0C2H7 136 aaKnown RBP1.03□□□□□ -2.24
VAM6YDL077C BAR1P12630 587 aa1.03□□□□□ -2.24
VAM6YDL077C CKA1P15790 372 aa1.03□□□□□ -2.24
VAM6YDL077C AAC3P18238 307 aa1.03□□□□□ -2.24
VAM6YDL077C MET16P18408 261 aaPredicted RBP1.03□□□□□ -2.24
VAM6YDL077C CDC42P19073 191 aa1.03□□□□□ -2.24
VAM6YDL077C CLN2P20438 545 aa1.03□□□□□ -2.24
VAM6YDL077C PRE7P23724 241 aaKnown RBP1.03□□□□□ -2.24
VAM6YDL077C DBR1P24309 405 aaKnown RBP1.03□□□□□ -2.24
VAM6YDL077C CPR4P25334 318 aa1.03□□□□□ -2.24
VAM6YDL077C ARE1P25628 610 aa1.03□□□□□ -2.24
VAM6YDL077C BUB2P26448 306 aaPredicted RBP1.03□□□□□ -2.24
VAM6YDL077C UBC8P28263 218 aa1.03□□□□□ -2.24
VAM6YDL077C MCM5P29496 775 aaKnown RBP1.03□□□□□ -2.24
VAM6YDL077C SNC1P31109 117 aa1.03□□□□□ -2.24
VAM6YDL077C CYS3P31373 394 aaKnown RBP1.03□□□□□ -2.24
VAM6YDL077C SEC17P32602 292 aa1.03□□□□□ -2.24
VAM6YDL077C YKL071WP36086 256 aa1.03□□□□□ -2.24
VAM6YDL077C APE3P37302 537 aaKnown RBP1.03□□□□□ -2.24
VAM6YDL077C YBR063CP38083 404 aa1.03□□□□□ -2.24
VAM6YDL077C AGP2P38090 596 aa1.03□□□□□ -2.24
VAM6YDL077C FUI1P38196 639 aa1.03□□□□□ -2.24
VAM6YDL077C AME1P38313 324 aa1.03□□□□□ -2.24
VAM6YDL077C TRS20P38334 175 aa1.03□□□□□ -2.24
VAM6YDL077C TAE1P38340 232 aa1.03□□□□□ -2.24
VAM6YDL077C UBX7P38349 436 aa1.03□□□□□ -2.24
VAM6YDL077C DBP8P38719 431 aa1.03□□□□□ -2.24
VAM6YDL077C CHL4P38907 458 aa1.03□□□□□ -2.24
VAM6YDL077C FET3P38993 636 aa1.03□□□□□ -2.24
VAM6YDL077C SPC25P40014 221 aa1.03□□□□□ -2.24
VAM6YDL077C LSM5P40089 93 aaKnown RBP1.03□□□□□ -2.24
VAM6YDL077C TIF34P40217 347 aaKnown RBP1.03□□□□□ -2.24
VAM6YDL077C RFC2P40348 353 aa1.03□□□□□ -2.24
VAM6YDL077C YIL165CP40446 119 aa1.03□□□□□ -2.24
VAM6YDL077C YKE4P40544 346 aa1.03□□□□□ -2.24
VAM6YDL077C LCB2P40970 561 aa1.03□□□□□ -2.24
VAM6YDL077C ERG10P41338 398 aaKnown RBP1.03□□□□□ -2.24
VAM6YDL077C CAT5P41735 233 aa1.03□□□□□ -2.24
VAM6YDL077C THI12P42883 340 aa1.03□□□□□ -2.24
VAM6YDL077C THI5P43534 340 aa1.03□□□□□ -2.24
VAM6YDL077C CAK1P43568 368 aaPredicted RBP1.03□□□□□ -2.24
VAM6YDL077C PTR3P43606 678 aa1.03□□□□□ -2.24
VAM6YDL077C IRC7P43623 340 aa1.03□□□□□ -2.24
VAM6YDL077C MCM22P47167 239 aa1.03□□□□□ -2.24
VAM6YDL077C SOL1P50278 321 aa1.03□□□□□ -2.24
VAM6YDL077C EXG2P52911 562 aa1.03□□□□□ -2.24
VAM6YDL077C YGL185CP53100 379 aa1.03□□□□□ -2.24
VAM6YDL077C ROG1P53118 685 aa1.03□□□□□ -2.24
VAM6YDL077C YGR053CP53234 283 aa1.03□□□□□ -2.24
VAM6YDL077C LSB1P53281 241 aa1.03□□□□□ -2.24
VAM6YDL077C OGG1P53397 376 aaPredicted RBP1.03□□□□□ -2.24
VAM6YDL077C NCE103P53615 221 aa1.03□□□□□ -2.24
VAM6YDL077C DBP6P53734 629 aaKnown RBP1.03□□□□□ -2.24
VAM6YDL077C LSM7P53905 115 aaKnown RBP1.03□□□□□ -2.24
VAM6YDL077C YKR011CQ02209 353 aa1.03□□□□□ -2.24
VAM6YDL077C ODC1Q03028 310 aa1.03□□□□□ -2.24
VAM6YDL077C YML131WQ03102 365 aa1.03□□□□□ -2.24
VAM6YDL077C GIS1Q03833 894 aa1.03□□□□□ -2.24
VAM6YDL077C RPN9Q04062 393 aaKnown RBP1.03□□□□□ -2.24
VAM6YDL077C YML096WQ04489 525 aa1.03□□□□□ -2.24
VAM6YDL077C YDR124WQ04608 324 aa1.03□□□□□ -2.24
VAM6YDL077C YLR224WQ05947 369 aa1.03□□□□□ -2.24
VAM6YDL077C IWR1Q07532 353 aaPredicted RBP1.03□□□□□ -2.24
VAM6YDL077C THI13Q07748 340 aa1.03□□□□□ -2.24
VAM6YDL077C YEH1Q07804 573 aa1.03□□□□□ -2.24
VAM6YDL077C PPM2Q08282 695 aa1.03□□□□□ -2.24
VAM6YDL077C CUE5Q08412 411 aaKnown RBP1.03□□□□□ -2.24
VAM6YDL077C RSB1Q08417 382 aa1.03□□□□□ -2.24
VAM6YDL077C YOR059CQ08448 450 aaKnown RBP1.03□□□□□ -2.24
VAM6YDL077C MMT2Q08970 484 aa1.03□□□□□ -2.24
VAM6YDL077C PRM4Q12498 284 aa1.03□□□□□ -2.24
VAM6YDL077C HBN1Q96VH4 193 aa1.03□□□□□ -2.24
VAM6YDL077C MTR10Q99189 972 aa1.03□□□□□ -2.24
VAM6YDL077C AI5_BETAQ9ZZX0 354 aa1.03□□□□□ -2.24
VAM6YDL077C UBR2Q07963 1872 aa1.03□□□□□ -2.25
VAM6YDL077C STE2D6VTK4 431 aa1.02□□□□□ -2.25
VAM6YDL077C BI2P03873 423 aa1.02□□□□□ -2.25
VAM6YDL077C MET17P06106 444 aa1.02□□□□□ -2.25
VAM6YDL077C RHO1P06780 209 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C CBP6P07253 162 aaPredicted RBP1.02□□□□□ -2.25
VAM6YDL077C CDC33P07260 213 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C RPS28BP0C0X0 67 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C RPB5P20434 215 aa1.02□□□□□ -2.25
VAM6YDL077C DAL81P21657 970 aa1.02□□□□□ -2.25
VAM6YDL077C KIN82P25341 720 aa1.02□□□□□ -2.25
VAM6YDL077C RSA4P25382 515 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C GID7P25569 745 aa1.02□□□□□ -2.25
VAM6YDL077C YCR099CP25657 155 aa1.02□□□□□ -2.25
VAM6YDL077C LAC1P28496 418 aa1.02□□□□□ -2.25
VAM6YDL077C YIM1P28625 365 aa1.02□□□□□ -2.25
VAM6YDL077C PMI40P29952 429 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C DBF20P32328 564 aa1.02□□□□□ -2.25
VAM6YDL077C MRP49P32388 137 aa1.02□□□□□ -2.25
VAM6YDL077C YOX1P34161 385 aa1.02□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 31 ms