RNA–Protein interactions for RNA: YDL074C

BRE1, Transcript of E3 ubiquitin ligase, yeastyeast

Gene BRE1, Length 2,103 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE1YDL074C YGR067CP53243 804 aa1.97□□□□□ -2.09
BRE1YDL074C YGR079WP53249 370 aa1.97□□□□□ -2.09
BRE1YDL074C RRN9P53437 365 aa1.97□□□□□ -2.09
BRE1YDL074C YNR061CP53747 219 aa1.97□□□□□ -2.09
BRE1YDL074C TPS1Q00764 495 aaKnown RBP1.97□□□□□ -2.09
BRE1YDL074C AIM36Q03798 255 aa1.97□□□□□ -2.09
BRE1YDL074C YMR130WQ04223 302 aa1.97□□□□□ -2.09
BRE1YDL074C RPC11Q04307 110 aaPredicted RBP1.97□□□□□ -2.09
BRE1YDL074C YMR315WQ04869 349 aaKnown RBP1.97□□□□□ -2.09
BRE1YDL074C RSF1Q05043 376 aa1.97□□□□□ -2.09
BRE1YDL074C RNH202Q05635 350 aa1.97□□□□□ -2.09
BRE1YDL074C RRP45Q05636 305 aaKnown RBP1.97□□□□□ -2.09
BRE1YDL074C SWA2Q06677 668 aa1.97□□□□□ -2.09
BRE1YDL074C VPS36Q06696 566 aa1.97□□□□□ -2.09
BRE1YDL074C YPR091CQ06833 770 aa1.97□□□□□ -2.09
BRE1YDL074C GSH2Q08220 491 aa1.97□□□□□ -2.09
BRE1YDL074C SGO1Q08490 590 aa1.97□□□□□ -2.09
BRE1YDL074C THP3Q12049 470 aaKnown RBP1.97□□□□□ -2.09
BRE1YDL074C YOL107WQ12239 342 aa1.97□□□□□ -2.09
BRE1YDL074C YLR126CQ12288 251 aa1.97□□□□□ -2.09
BRE1YDL074C HSP42Q12329 375 aa1.97□□□□□ -2.09
BRE1YDL074C YOR019WQ99248 730 aa1.97□□□□□ -2.09
BRE1YDL074C LEU4P06208 619 aaKnown RBP1.97□□□□□ -2.09
BRE1YDL074C HMG1P12683 1054 aa1.97□□□□□ -2.09
BRE1YDL074C STE12P13574 688 aa1.97□□□□□ -2.09
BRE1YDL074C CBS1P14066 229 aa1.97□□□□□ -2.09
BRE1YDL074C CDC34P14682 295 aa1.97□□□□□ -2.09
BRE1YDL074C TEC1P18412 486 aa1.97□□□□□ -2.09
BRE1YDL074C DBF2P22204 572 aa1.97□□□□□ -2.09
BRE1YDL074C TAH1P25638 111 aaPredicted RBP1.97□□□□□ -2.09
BRE1YDL074C SNC1P31109 117 aa1.97□□□□□ -2.09
BRE1YDL074C PRO1P32264 428 aa1.97□□□□□ -2.09
BRE1YDL074C SPT14P32363 452 aa1.97□□□□□ -2.09
BRE1YDL074C HYM1P32464 399 aa1.97□□□□□ -2.09
BRE1YDL074C SFA1P32771 386 aa1.97□□□□□ -2.09
BRE1YDL074C MAC1P35192 417 aa1.97□□□□□ -2.09
BRE1YDL074C ECM15P35195 104 aa1.97□□□□□ -2.09
BRE1YDL074C YKL063CP35725 167 aa1.97□□□□□ -2.09
BRE1YDL074C RCN1P36054 211 aa1.97□□□□□ -2.09
BRE1YDL074C SHE2P36068 246 aaKnown RBP RIP-Chip data1.97□□□□□ -2.09not detected
BRE1YDL074C MCM7P38132 845 aa1.97□□□□□ -2.09
BRE1YDL074C TRR2P38816 342 aa1.97□□□□□ -2.09
BRE1YDL074C AIM2P39721 246 aa1.97□□□□□ -2.09
BRE1YDL074C GDI1P39958 451 aaKnown RBP1.97□□□□□ -2.09
BRE1YDL074C YER184CP39961 794 aa1.97□□□□□ -2.09
BRE1YDL074C PCL6P40038 420 aa1.97□□□□□ -2.09
BRE1YDL074C LAS21P40367 830 aa1.97□□□□□ -2.09
BRE1YDL074C ATG18P43601 500 aa1.97□□□□□ -2.09
BRE1YDL074C ALK1P43633 760 aaKnown RBP1.97□□□□□ -2.09
BRE1YDL074C TIM54P47045 478 aa1.97□□□□□ -2.09
BRE1YDL074C IMD4P50094 524 aaKnown RBP1.97□□□□□ -2.09
BRE1YDL074C CWC23P52868 283 aaPredicted RBP1.97□□□□□ -2.09
BRE1YDL074C RAI1P53063 387 aaKnown RBP1.97□□□□□ -2.09
BRE1YDL074C ERG26P53199 349 aaKnown RBP1.97□□□□□ -2.09
BRE1YDL074C RBG2P53295 368 aaKnown RBP1.97□□□□□ -2.09
BRE1YDL074C MRPL50P53724 139 aa1.97□□□□□ -2.09
BRE1YDL074C COS1P53822 381 aa1.97□□□□□ -2.09
BRE1YDL074C HXT15P54854 567 aa1.97□□□□□ -2.09
BRE1YDL074C AAT1Q01802 451 aa1.97□□□□□ -2.09
BRE1YDL074C YKR011CQ02209 353 aa1.97□□□□□ -2.09
BRE1YDL074C FDC1Q03034 503 aa1.97□□□□□ -2.09
BRE1YDL074C MAK3Q03503 176 aa1.97□□□□□ -2.09
BRE1YDL074C SEC13Q04491 297 aaKnown RBP1.97□□□□□ -2.09
BRE1YDL074C NAT4Q04751 285 aa1.97□□□□□ -2.09
BRE1YDL074C RQC1Q05468 723 aaKnown RBP1.97□□□□□ -2.09
BRE1YDL074C MRX10Q05648 414 aa1.97□□□□□ -2.09
BRE1YDL074C YPS7Q06325 596 aa1.97□□□□□ -2.09
BRE1YDL074C YPR196WQ06595 470 aa1.97□□□□□ -2.09
BRE1YDL074C ASR1Q06834 288 aa1.97□□□□□ -2.09
BRE1YDL074C SYO1Q07395 620 aa1.97□□□□□ -2.09
BRE1YDL074C THI73Q07904 523 aa1.97□□□□□ -2.09
BRE1YDL074C REX3Q12090 404 aa1.97□□□□□ -2.09
BRE1YDL074C ACF2Q12168 779 aa1.97□□□□□ -2.09
BRE1YDL074C RTN2Q12443 393 aa1.97□□□□□ -2.09
BRE1YDL074C SKS1Q12505 502 aa1.97□□□□□ -2.09
BRE1YDL074C YDL007C-AQ2V2Q0 85 aa1.97□□□□□ -2.09
BRE1YDL074C SIR3P06701 978 aa1.96□□□□□ -2.1
BRE1YDL074C GCD1P09032 578 aaPredicted RBP1.96□□□□□ -2.1
BRE1YDL074C HAP4P14064 554 aa1.96□□□□□ -2.1
BRE1YDL074C AAC3P18238 307 aa1.96□□□□□ -2.1
BRE1YDL074C FPS1P23900 669 aa1.96□□□□□ -2.1
BRE1YDL074C YIM1P28625 365 aa1.96□□□□□ -2.1
BRE1YDL074C CDC12P32468 407 aaKnown RBP1.96□□□□□ -2.1
BRE1YDL074C PUB1P32588 453 aaKnown RBP RIP-Chip data1.96□□□□□ -2.1not detected
BRE1YDL074C CDC13P32797 924 aaKnown RBP1.96□□□□□ -2.1
BRE1YDL074C ORC2P32833 620 aa1.96□□□□□ -2.1
BRE1YDL074C SUI1P32911 108 aaKnown RBP1.96□□□□□ -2.1
BRE1YDL074C VPS17P32913 551 aa1.96□□□□□ -2.1
BRE1YDL074C SLC1P33333 303 aa1.96□□□□□ -2.1
BRE1YDL074C ECT1P33412 323 aa1.96□□□□□ -2.1
BRE1YDL074C TOD6P34219 525 aa1.96□□□□□ -2.1
BRE1YDL074C YRO2P38079 344 aa1.96□□□□□ -2.1
BRE1YDL074C SEA4P38164 1038 aa1.96□□□□□ -2.1
BRE1YDL074C CCZ1P38273 704 aa1.96□□□□□ -2.1
BRE1YDL074C VBA2P38358 474 aaKnown RBP1.96□□□□□ -2.1
BRE1YDL074C YHR097CP38809 366 aaKnown RBP1.96□□□□□ -2.1
BRE1YDL074C CHL4P38907 458 aa1.96□□□□□ -2.1
BRE1YDL074C MLH1P38920 769 aa1.96□□□□□ -2.1
BRE1YDL074C AIM10P39965 576 aaKnown RBP1.96□□□□□ -2.1
BRE1YDL074C FMC1P40491 155 aa1.96□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms